Cfor009954.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- ARID5B
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000005.1:24064896-24077923[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 1e+04 -2.7 0.1 32 46 150 164 147 172 0.83 2 2 1.9e-24 7.4e-21 74.7 0.1 1 89 258 344 258 344 0.94
Sequence Information
- Coding Sequence
- ATGGTAACAATACAAGCCATAGTCGCTTGCGAATTCGTCGGTTGGAGGGCGCGGAAAAGATGTGTCGATAACAGTGAATCCGAACTCAGAAAAGAAAATGGCAgaaaaGATGAAGTTTTAGCCATTTCGGAAAAAGTCGTCATCAGAGTGGAAGATTTGATCACATGGATCACTGTTGAGGCTGAATGGACTTGGGGTAGGTTGGCGAATTGTGAGTCCGAAATGAACGAGCTCGAAGCGGATCCGGACAAATGTACAGCTCCCAAGAAACCAATGGGTCATTATTTTAGTCCATCCGAAACGCTACTCGACTTCTCAGACGTCGAGCAAGAACGTCAGCAATTAGAACAAACCGCGGCAGAAAACCACGAACCTCACGTCGTCATCCTCAGTTTCCAGAAGTATTGTCGCTACAGAGCGATGATGAAACGCTTAGAAGGCGTGGAAAATCTCTACCTCAAATACAAAATAGTAAATGCGCTTGGTGGATTCTACGTAAAGCATCACAACACTAGGGTATTATTTTGCCGCGACACATTCGATTATCCGGAACTGGAAGGTCACGAGCTTCTATGCAATCATTTAGCGCCTAAATTAAAGGGAAGGCCTAGGGGAAAGCGGAAAAAGCGTAGCGTCTCGCCTGGTTCGGAGAGTAACGAATCCGAGTCTTCCATTACGAATCACTATACAAGGTCATTGGAAAAGTCGAATGGTGCTCGTTCAGAATCGCCGATCGCCACCCGGCGGAGTGCTCGCAACCACGATAACAATGAAAACAAAGAGTTTATGAAAACTCTGACGGCTTTTATGAAATCCAAGCAAATCTCCATGGGCCGGGTCCCGTCCTTAGGATATAAGGAACtAAATTTGCACGAGTTCTTTACAAAAGTTCAAAAACTCGGAGGCTACGATGCCGTTACGACGAATCGTCTATGGAAATCCATTTTCGATGATATGAGCGGTTTTCTAAACAGCACAAGCGCAGCTACTGTTGTCAGGCGACATTACGAGAGATTTCTTCTTGCGTACGAACGGCACCTAAAAGGGGAAGAACACAAACCTCTTCCTGTATCTGAGAGAAGAAGACTGAAATCCAAACGAGAAAGTTCTAGCAACAGTAGCGTGAGCGATGCAGAATCAGTTACCGATGTTCCGATACCTTCCACTTCCGGAACGAATTCTCCACAAGCGAGTAGTGAAAATAAGGAAACCAATACACTAGGAAAAACTTCCTCTTTGAGAAGTATTCGAGTGAAACCAGAGaggcaaaaagaaaaacaagatGATAAAATTAAAGAGGCTCAAGATAGTAAGATAAATTCCGAACTTAAATTGGAGCCTAAAAGCAGTACCGATGATATACGACCCAACAACTCTCCCGCCGAAAGCGAACGGAAAGTTGAAGCAAAGTTGATTATGGAGGAATCTATAAAGTGTACAGAAGTAGAGCAGAAAATTGAGACCAAACCTGCCGTATCACTTCTCAACGAAGAATCGAGTACAAAGATTGAACCGGATAATCAGGATGAAAATAGGGTACAAATAGAAAGACAAACAACTGATAAAGACGCTAGTCCGTTGACATCGGCCGTTGCGCCAATAGTTCACAAGATTATAGCAGAAAAAACTCCATCACCTGTGGAAGGTAAAGAAAACATACCGATCATTAAAACTGGCGAAGCTGCTGTACCTACCAACACTCCTGAAGTGATGATGACCTCCTTCAAGTACAATGCCCCAGACGCGTCCAAAAAAGATtcggaatttttcaaaaacctgaACAGTTCCTTTATACgggatctaaaaaaaattaagctggACATCTTGAAGGAGGGAGGCTTGGAAGTCACTCCGATTAAAGCCGGAACGGGATCGTCttcaataaaagaaataagACCATCGGTAATACAACCGACGGCTCAGAGTCCAGCTAAAACTTTGACTCCTCCTTCGCTGACTAGCGGCTCTTTTCCGAAAAGGATCCACGTGTCGATCACCCCAAGCGTAAACGTTACGCAAATTAAACCAGCTAATAGTACTCCCGTAAAACAGATCAAACCGGATAAGGCTTCGTTTGTAGATAGCACTACGCCACCCAAAGTAGTGCAGTCCAAGTCGATTTATTCATATTCGGAAAAAACGGTGTACGGGAATCCGAAAGATATTTTGCAACCTGCTTTGGTGCCTCGATTTTCGGGCGCAACAATCAAACATGGCGGGGGTGACCCCATCGATCTGTCAGTTACAAGCCCACAGAAACCCGTCGTGGAAATTATGAGAATTCAGCAATCGTCCATGTCTGCCATGAATTTTCCTCACAATCGCGAGACCGTaacaaaaaatttgtataaatctGCAAAAGCGTCGTTACTCGACGGCAGACGACTAGGGTCCAATTTGGAAATTACTCTTGTAGGACCAAAATCGGCGGCGATGCAACCGCCAAAAGTACCAAGCAATTCTATGAGAGTTGCGACACAGAAACGCTCAACAAGTGATAATTATGCCAACAAGACTGCAAAACTTAGAACAGATCAAAGTGCTAAACAAGATAAGTATGGTGCGCCGTCGGTGTATAAAAACAGTGTAGAAGTGGGTGGCTATAGCTCCTTCAATAATAGCTTAAATTCAAGTGCTAAAAGCGAGATGAAATTATCCTCACAAACGCAGAAACCACTTATACCGCCCTTTCCACAGACAATGCCGCCGTACCTGGGACAGTTTCCCGAAAACGTTAATGGAGTCAATCCGTTTATACCTCTGATGGATTCTTTGTATTACCAAGCTGCACTCCAGAACGCGTATTCAAATATACCTAGTTTACCGCCTCCGATTCTACCCATTCCTACTCCAGACCAGTTGAAGCTTTATGCCGAGCTTATGGCTCACGGGAGGTTAAATTTTCCCTTCCAATCTCCCAAAGATGGTCATCCATCCGCAATAAACAATAACGGCAAGACCCAGTAA
- Protein Sequence
- MVTIQAIVACEFVGWRARKRCVDNSESELRKENGRKDEVLAISEKVVIRVEDLITWITVEAEWTWGRLANCESEMNELEADPDKCTAPKKPMGHYFSPSETLLDFSDVEQERQQLEQTAAENHEPHVVILSFQKYCRYRAMMKRLEGVENLYLKYKIVNALGGFYVKHHNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSITNHYTRSLEKSNGARSESPIATRRSARNHDNNENKEFMKTLTAFMKSKQISMGRVPSLGYKELNLHEFFTKVQKLGGYDAVTTNRLWKSIFDDMSGFLNSTSAATVVRRHYERFLLAYERHLKGEEHKPLPVSERRRLKSKRESSSNSSVSDAESVTDVPIPSTSGTNSPQASSENKETNTLGKTSSLRSIRVKPERQKEKQDDKIKEAQDSKINSELKLEPKSSTDDIRPNNSPAESERKVEAKLIMEESIKCTEVEQKIETKPAVSLLNEESSTKIEPDNQDENRVQIERQTTDKDASPLTSAVAPIVHKIIAEKTPSPVEGKENIPIIKTGEAAVPTNTPEVMMTSFKYNAPDASKKDSEFFKNLNSSFIRDLKKIKLDILKEGGLEVTPIKAGTGSSSIKEIRPSVIQPTAQSPAKTLTPPSLTSGSFPKRIHVSITPSVNVTQIKPANSTPVKQIKPDKASFVDSTTPPKVVQSKSIYSYSEKTVYGNPKDILQPALVPRFSGATIKHGGGDPIDLSVTSPQKPVVEIMRIQQSSMSAMNFPHNRETVTKNLYKSAKASLLDGRRLGSNLEITLVGPKSAAMQPPKVPSNSMRVATQKRSTSDNYANKTAKLRTDQSAKQDKYGAPSVYKNSVEVGGYSSFNNSLNSSAKSEMKLSSQTQKPLIPPFPQTMPPYLGQFPENVNGVNPFIPLMDSLYYQAALQNAYSNIPSLPPPILPIPTPDQLKLYAELMAHGRLNFPFQSPKDGHPSAINNNGKTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -