Cstr015612.1
Basic Information
- Insect
- Cydia strobilella
- Gene Symbol
- gata5-b
- Assembly
- GCA_947568885.1
- Location
- OX387675.1:29207490-29210040[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-17 2.7e-13 49.9 3.3 1 35 466 499 466 500 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGGAAACGAATACAACGGCGGGCGACGGCGAAAATCAACAGGAATTGCAAGCTACTGCCGAGGCATTACAACTTGTAAAACATGAAGAGAGGATCGAACAAAATCAATCTACAAACAAGAGTGCGAGCTCTCCGGCCGATACGGCTGCCGACCTACAGCAGTCCCCGCATCCGCAGTCGCAGTCAGTAATAACATCTCGTCGCGCCGTACGTACTATCACTGCCGCCGGGCACATCACCACCGATGACGTTGATGTCAATCCTGAAGATGGCGTGAAGGACGAACCCCCTGAACCACCACCGGTAGAACATGAACAGCATTCCATGCATCAATATACACCAAAACTGGAAGAAAGCGAGGCAAGGAATATTGCACAGCAACATTACGACGAAGAAAGGCTACGTTTAGCCGAAGCAGAAACAGCTCGATATCTAGCTTTCAAACCGGAATCTTATAGATCACTGCCATCCCCAGATAAACGCATGCAGGTACAATATACCCGTGCTCCACAGCGCCCCACATACGGCAGGGGACTATCTTTGCGTTATGGTGCGTCGCATCACGTTATAGTCGCGCAGGAAAACAATGCAGAAGATCACGATCCGGATGCTTTCCTTGGCCACAAAGACAAACCGGAACAATTACAATACGCCCAAAATGATGACATCGGCGCACCGGGTACCAGTGATGGCAGGCAATATGGAGCAGTTCTGAGCGATCAAGTGTCGGCGTCGTCATCTCTCGAAATGATTCAAACGACTTCTTTGAACAGTCAACAGGCAATTGGTGTTGCGTACCAACAAGTTAAATATGAGACCAGAGGAGAACCTGAATTACGACCTACGACATATGCTAGTCTGCAGCCAGTAACTTCTGTACACGGAGGTTATGCATATGCGGGACAGAGCCCTCAGTATGGTGGAGCCGGAGGGTATGGAGCGTACGGTGGCGGAGGCAAGGAGCTGCTTACGCTCTACGGTGCGGCGGGCGCTGCGGCTTCCGGGACGAGAGGAGACGAGTCCCCGCCCGGCCAACTCCTCTACCGGAGCGATCCTACACTATCATCATCATCCCTGACCACGCGCGGAACGCATGTCGTGTACGGATCGGTTGTACCGCAATCGCAAACAGTTTATGAAGCCCCAGCTAGTCCAAACTCACAACAGGTAACATTATATACACATGGGAATGCTGTACAATACAAAGTCGCCGGCGAGCACTACCTGGGTCAGGGAGGTGGCGTGGAGTACGTGCCCGTGTCCGGATACGACGGTGGCCTGCTGGTGGAAGGCTACGCGGCGCCGGCGCAGCCGTGGCCTGCACATAATATGCTACCAATTGACGATGGTTTTGATGCCAGCATGGCTGGGATGGGAGAAGTAAAAGAATGCGTGAACTGCGCAGCAGCAACCACTCCCCTGTGGCGACGCGACGGCACGGGGCACTACCTGTGCAACGCCTGCGGCCTCTACACGCGCATCAATGGTGTTAATAGGCCACCTCTTAAAGGACAGAAAGCAAAACCTCAACAAGCACTGGTAAATATTTGA
- Protein Sequence
- MESETNTTAGDGENQQELQATAEALQLVKHEERIEQNQSTNKSASSPADTAADLQQSPHPQSQSVITSRRAVRTITAAGHITTDDVDVNPEDGVKDEPPEPPPVEHEQHSMHQYTPKLEESEARNIAQQHYDEERLRLAEAETARYLAFKPESYRSLPSPDKRMQVQYTRAPQRPTYGRGLSLRYGASHHVIVAQENNAEDHDPDAFLGHKDKPEQLQYAQNDDIGAPGTSDGRQYGAVLSDQVSASSSLEMIQTTSLNSQQAIGVAYQQVKYETRGEPELRPTTYASLQPVTSVHGGYAYAGQSPQYGGAGGYGAYGGGGKELLTLYGAAGAAASGTRGDESPPGQLLYRSDPTLSSSSLTTRGTHVVYGSVVPQSQTVYEAPASPNSQQVTLYTHGNAVQYKVAGEHYLGQGGGVEYVPVSGYDGGLLVEGYAAPAQPWPAHNMLPIDDGFDASMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALVNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290334;
- 90% Identity
- -
- 80% Identity
- -