Cstr015620.1
Basic Information
- Insect
- Cydia strobilella
- Gene Symbol
- pnr
- Assembly
- GCA_947568885.1
- Location
- OX387675.1:29340737-29361424[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-18 1.2e-14 54.2 4.1 1 35 105 138 105 139 0.97 2 2 4e-18 1.1e-14 54.3 6.3 1 34 159 191 159 193 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGAGGCAACGGGGGAGGGTATGCGGGCAGCGGCGACTGCGCCGAGGGCTACGGGCTGGGCTACGTGGCGGGAGGAGGCCGCCTTCAGCAGTACGCGCACTTCCCGCACCAGAACGTCTGGCATCACCATCACACTCCGCACCACGACACTTACGCAGGCAGTAGCAGCGTTGGTGGCGTCAGCTCCATGGCCGGCGGCCTGTACCCCCAGAACATGGTGATGGGTTCCTGGTGCGCCCCATACGACGCACTGCAGCGCCCTCCTGCATACGATGGCGGTCTGGAATCTTACGAAGAGGGTCGTGAGTGTGTTAACTGCGGCGCCAATAACACCCCGCTGTGGCGCAGGGACTCCACGGGGCACTACCTGTGCAACGCATGCGGCCTCTACCACAAGATCAACGGCGTGAACCGGCCGCTCGTCAAGCCCAGCAAGCGGCTGTCGGCTGCGCGGCGCCACGGGCAGTGCTGCACCAACTGCGGGTCGCGCAACACCACCCTGTGGCGGCGGAACAACGAGGGCGAGCCAGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCATGGTATTAATCGTGCAAGCTTACAGTACTACACCAATTCACTTACACCCTAG
- Protein Sequence
- MFGGNGGGYAGSGDCAEGYGLGYVAGGGRLQQYAHFPHQNVWHHHHTPHHDTYAGSSSVGGVSSMAGGLYPQNMVMGSWCAPYDALQRPPAYDGGLESYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNEGEPVCNACGLYYKLHGINRASLQYYTNSLTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078730;
- 90% Identity
- -
- 80% Identity
- -