Basic Information

Insect: Cydia strobilella
Gene Symbol: znf711
Assembly: GCA_947568885.1
Location: OX387694.1:9864697-9872947[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0038 0.23 12.6 1.9 2 23 75 96 74 96 0.96

2 12 0.054 3.3 8.9 1.3 2 23 103 125 102 125 0.94

3 12 0.31 19 6.5 1.3 2 23 133 155 132 155 0.93

4 12 0.00097 0.06 14.4 9.1 1 23 161 183 161 183 0.97

5 12 1.8e-05 0.0011 19.9 2.7 1 23 189 211 189 211 0.97

6 12 0.073 4.5 8.5 0.9 1 19 217 235 217 238 0.95

7 12 0.085 5.2 8.3 1.4 3 19 257 273 256 278 0.92

8 12 0.00021 0.013 16.5 2.5 1 23 559 581 559 581 0.96

9 12 0.00058 0.036 15.1 3.6 1 23 588 610 588 610 0.97

10 12 0.25 16 6.8 0.5 2 23 619 643 618 643 0.90

11 12 0.011 0.66 11.1 5.2 1 19 649 669 649 673 0.92

12 12 9.5e-06 0.00059 20.7 0.9 1 22 679 700 679 700 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0038	0.23	12.6	1.9	2	23	75	96	74	96	0.96
2	12	0.054	3.3	8.9	1.3	2	23	103	125	102	125	0.94
3	12	0.31	19	6.5	1.3	2	23	133	155	132	155	0.93
4	12	0.00097	0.06	14.4	9.1	1	23	161	183	161	183	0.97
5	12	1.8e-05	0.0011	19.9	2.7	1	23	189	211	189	211	0.97
6	12	0.073	4.5	8.5	0.9	1	19	217	235	217	238	0.95
7	12	0.085	5.2	8.3	1.4	3	19	257	273	256	278	0.92
8	12	0.00021	0.013	16.5	2.5	1	23	559	581	559	581	0.96
9	12	0.00058	0.036	15.1	3.6	1	23	588	610	588	610	0.97
10	12	0.25	16	6.8	0.5	2	23	619	643	618	643	0.90
11	12	0.011	0.66	11.1	5.2	1	19	649	669	649	673	0.92
12	12	9.5e-06	0.00059	20.7	0.9	1	22	679	700	679	700	0.97

Sequence Information

Coding Sequence: ATGGATTCGACGCTATCCTTCTTTAGTCTACCATTTGTAGACTCCGAGAGTGCTGAATTGGCACTTAATATCAAGCACGTGAATCCAGACTGTGGTTATGATGAGCTTCACTCCAGCTTGCCCTCACACAGTGGCTTGCTAGGCCACGATGACGTGTTGGCCCAGTTCCTGTCGCCAGACGAGCCGCTGGAGGAGCCCGACCTCAACGGCCCCACCACCTTGCACTGCGAGATATGTCAGAAAAAGTTTGACAATGCTAAGAAGTACTATGGTCATCTTAGAATACATTCCAAGGGCAATGCTTGGGTTTGTGACAAGTGCCCGGACCAGAAGTTTCCCACTAAGCAGCACCTCATGAAGCACAGCCTCAGTCACAAGCCCCTGGAGCGAGTGTGGCGGTGTCAGCACTGCAGCCTGTCCTTTGAGGCCCTCTGGAGGCTCCAACAGCATCTCTTCTCTACCCATTTGGAGAACAGGCCCCACAAATGTGATGAATGTGAAAAATGTTTCCATAAAAAATCTGATTTAAAGAGGCACAAAGACATGCACAGCAATGTAAAGAAATTCGCCTGTTCAGTATGTGAGATGGAGTTCAAAGACAAGTGCAATCTTAAGAGGCATATGTTGCGGCACACCAACGAGAAGCCCTACTGCTGTGCAGGCTGCGGCAATAGGTATAAACAGTTGGCATCCATGAAAAGGCACAGTGTGAAGTGCCCCAAAAATCAGAACAACATAAATGTGGATCCCAAAGTAAGGAAGAATCACTGCACAGTGTGCGGCATGATGTTTCAGTACAAGAGTGCTTTATTGGAACATTGCGTCAGGGTGCACACAAACCCTCCAAGCACCGCAAGCCCCCCCGACACCGAACCCGACAAGCCCCACGTGCAGCTCACCATAGACCACAACCGCCTCGACACCATCGTCGACGACATCCTCGCTGCCGAGGACGACTACCTCTCCCTCTCGCACAACAACATCCTCAACTACAACCAGAACGAGACACAAGATAATAATGATAACCTCATGCATGTGGAATTCTTAAAAGCAATGAATCAGTTACACAGTCTTGATGATGAACTGTTTTATAACGATTTAGATTTAGATAACTTCCAGGCTTCACATATATTTAACATGAATACTAATGATATGGACTACGGAGATAAAAATGGAGAAATTCTCTTCGATTTTGCTGATAATGGGAGAAGTATGGATCAAGATATTATGAATGTGCTCTCCGATGCTGCAGCCCCGGAGACAACTAAGACTGAACCCGAAAATCCCCCAGTCTCTGTGGACGAATGTGCGACGATTTTTGAAAGTGATGTAGATTTAGAAGCAAGTACAAATTTAGCGGCTAATTTGAATCAGTTGATTGGCGAGAATAATGTTCATTATGTTTCAACGGAGGATGATGATACATTTATAATTAGTTTGAACAGTGCTATAGATGCTGAACAGTTGACGGATATGTTAAATATAGGAATTGAATTAGTTGAAAATAATAATGAAGAGAAAACATCAGAAGTAGTACCGGAACCAGATAAGACTGATTATCAGATAGATGAGCCAATCGTAGTGAAAATTGAAGAACCTATACTCAGTAACGTCGCGCCTAATGATAACAAGAAAAATGTTGTAGTAACGCCAAAGATAAAGAAATGCACTTTATTTATTTGCCGGACATGTAATAAAGTATTTAAAAAGAAGGAAAATTACAAGTCACACAAAGCAATACACAACCCATCCCTGCGCTCGCACCGCTGCCGCTCGTGCGGAGTCCGCTTCAGCTACCGCTCCACGCTCAACAAGCACCGCGCCATGCACGAGCGCAGGCCCGAGCGGCGCCTCGAGTGCGGACACGAGGGGTGCCACAAGGTGTACGACGCGGCGTGGAAGTTAAAAAATCACGTAGAGCGCGACCACGAAAAACTGACGCCGTACAAATGCGACAGACAGGGTTGTGGGAAGAGGTTCTACAAGAAGTGCGACTTGCAGAAACATGACAGGTTCCACTCCGGCGAGCGGCCGTACTCTTGTGACATCTGCCAGCGCGCCTTCCAGCAGATCTCGCATCTGAAGCGCCATATACGGACCGTCGACTGCACTCAACAGTGA
Protein Sequence: MDSTLSFFSLPFVDSESAELALNIKHVNPDCGYDELHSSLPSHSGLLGHDDVLAQFLSPDEPLEEPDLNGPTTLHCEICQKKFDNAKKYYGHLRIHSKGNAWVCDKCPDQKFPTKQHLMKHSLSHKPLERVWRCQHCSLSFEALWRLQQHLFSTHLENRPHKCDECEKCFHKKSDLKRHKDMHSNVKKFACSVCEMEFKDKCNLKRHMLRHTNEKPYCCAGCGNRYKQLASMKRHSVKCPKNQNNINVDPKVRKNHCTVCGMMFQYKSALLEHCVRVHTNPPSTASPPDTEPDKPHVQLTIDHNRLDTIVDDILAAEDDYLSLSHNNILNYNQNETQDNNDNLMHVEFLKAMNQLHSLDDELFYNDLDLDNFQASHIFNMNTNDMDYGDKNGEILFDFADNGRSMDQDIMNVLSDAAAPETTKTEPENPPVSVDECATIFESDVDLEASTNLAANLNQLIGENNVHYVSTEDDDTFIISLNSAIDAEQLTDMLNIGIELVENNNEEKTSEVVPEPDKTDYQIDEPIVVKIEEPILSNVAPNDNKKNVVVTPKIKKCTLFICRTCNKVFKKKENYKSHKAIHNPSLRSHRCRSCGVRFSYRSTLNKHRAMHERRPERRLECGHEGCHKVYDAAWKLKNHVERDHEKLTPYKCDRQGCGKRFYKKCDLQKHDRFHSGERPYSCDICQRAFQQISHLKRHIRTVDCTQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00410701;
90% Identity: iTF_00409641;
80% Identity: -