Basic Information

Insect: Cydia strobilella
Gene Symbol: -
Assembly: GCA_947568885.1
Location: OX387688.1:14898136-14902969[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.1 3.1e+02 2.4 0.0 34 68 64 98 42 112 0.78

2 14 0.1 3.1e+02 2.4 0.0 34 68 161 195 139 209 0.78

3 14 0.1 3.1e+02 2.4 0.0 34 68 258 292 236 306 0.78

4 14 0.1 3.1e+02 2.4 0.0 34 68 355 389 333 403 0.78

5 14 0.1 3.1e+02 2.4 0.0 34 68 452 486 430 500 0.78

6 14 0.1 3.1e+02 2.4 0.0 34 68 549 583 527 597 0.78

7 14 0.1 3.1e+02 2.4 0.0 34 68 646 680 624 694 0.78

8 14 0.1 3.1e+02 2.4 0.0 34 68 743 777 721 791 0.78

9 14 0.1 3.1e+02 2.4 0.0 34 68 840 874 818 888 0.78

10 14 0.1 3.1e+02 2.4 0.0 34 68 937 971 915 985 0.78

11 14 0.1 3.1e+02 2.4 0.0 34 68 1034 1068 1012 1082 0.78

12 14 0.1 3.1e+02 2.4 0.0 34 68 1131 1165 1109 1179 0.78

13 14 0.14 4.3e+02 2.0 0.0 34 67 1228 1261 1206 1271 0.79

14 14 1.3 3.8e+03 -1.1 0.0 41 67 1268 1294 1265 1304 0.79

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.1	3.1e+02	2.4	34	68	64	98	42	112	0.78
2	14	0.1	3.1e+02	2.4	34	68	161	195	139	209	0.78
3	14	0.1	3.1e+02	2.4	34	68	258	292	236	306	0.78
4	14	0.1	3.1e+02	2.4	34	68	355	389	333	403	0.78
5	14	0.1	3.1e+02	2.4	34	68	452	486	430	500	0.78
6	14	0.1	3.1e+02	2.4	34	68	549	583	527	597	0.78
7	14	0.1	3.1e+02	2.4	34	68	646	680	624	694	0.78
8	14	0.1	3.1e+02	2.4	34	68	743	777	721	791	0.78
9	14	0.1	3.1e+02	2.4	34	68	840	874	818	888	0.78
10	14	0.1	3.1e+02	2.4	34	68	937	971	915	985	0.78
11	14	0.1	3.1e+02	2.4	34	68	1034	1068	1012	1082	0.78
12	14	0.1	3.1e+02	2.4	34	68	1131	1165	1109	1179	0.78
13	14	0.14	4.3e+02	2.0	34	67	1228	1261	1206	1271	0.79
14	14	1.3	3.8e+03	-1.1	41	67	1268	1294	1265	1304	0.79

Sequence Information

Coding Sequence: ATGTTTGAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAGCGTGTGTCGTGAAGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGGTATGCGGCAGCTGGAACAGCGTGTGCAGGTGCCGGAGTGCGCGCGCGCAGCACAGCTCGGAGCGCATGAGGCGCGCGCAGGTGCGCAGCAGCGTGGTGAGCACGCGGCGAGTGGCCCAGAGTTGCAAGCATATAGCATCAGTATATACTCACCACGGTAG
Protein Sequence: MFEYILTTVACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRACVVKVVCGSWNSVCRCRSARAQHSSERMRRAQVRSSVVSTRRVAQSCKHIASVYTHHGSVCREGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRGGMRQLEQRVQVPECARAAQLGAHEARAGAQQRGEHAASGPELQAYSISIYSPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -