Basic Information

Insect: Cydia pomonella
Gene Symbol: nfxl1
Assembly: GCA_033807575.1
Location: JAPFFR010000099.1:18580-21053[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2 4.4e+04 -7.5 5.6 15 19 134 138 133 138 0.81

2 18 0.053 1.2e+03 0.9 0.4 4 10 169 175 168 175 0.96

3 18 2.5e-07 0.0055 17.9 15.9 3 19 186 202 185 202 0.95

4 18 1.5e-06 0.032 15.5 12.1 3 19 239 255 237 255 0.91

5 18 1.3 2.8e+04 -3.5 1.0 5 10 279 284 279 284 0.86

6 18 6.8e-10 1.5e-05 26.1 12.2 1 19 290 308 290 308 0.99

7 18 6.7e-08 0.0015 19.8 17.1 3 19 345 361 337 361 0.86

8 18 1.6 3.5e+04 -3.8 0.7 1 4 370 373 370 373 0.94

9 18 2 4.4e+04 -5.0 2.2 5 10 384 389 384 389 0.88

10 18 4.8e-06 0.11 13.8 18.3 1 18 395 412 395 413 0.97

11 18 1.2e-08 0.00026 22.2 17.3 1 19 422 440 422 440 0.99

12 18 7.3e-05 1.6 10.1 5.3 9 19 488 498 486 498 0.89

13 18 0.024 5.2e+02 2.0 1.3 6 12 497 503 497 504 0.92

14 18 0.012 2.7e+02 3.0 5.5 3 11 509 517 508 518 0.88

15 18 0.3 6.7e+03 -1.5 3.3 14 18 547 551 547 552 0.85

16 18 0.17 3.8e+03 -0.7 0.4 8 12 568 572 567 579 0.79

17 18 0.0022 49 5.3 6.4 1 11 588 598 582 599 0.91

18 18 2 4.4e+04 -6.2 3.6 5 10 615 620 613 620 0.66

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2	4.4e+04	-7.5	5.6	15	19	134	138	133	138	0.81
2	18	0.053	1.2e+03	0.9	0.4	4	10	169	175	168	175	0.96
3	18	2.5e-07	0.0055	17.9	15.9	3	19	186	202	185	202	0.95
4	18	1.5e-06	0.032	15.5	12.1	3	19	239	255	237	255	0.91
5	18	1.3	2.8e+04	-3.5	1.0	5	10	279	284	279	284	0.86
6	18	6.8e-10	1.5e-05	26.1	12.2	1	19	290	308	290	308	0.99
7	18	6.7e-08	0.0015	19.8	17.1	3	19	345	361	337	361	0.86
8	18	1.6	3.5e+04	-3.8	0.7	1	4	370	373	370	373	0.94
9	18	2	4.4e+04	-5.0	2.2	5	10	384	389	384	389	0.88
10	18	4.8e-06	0.11	13.8	18.3	1	18	395	412	395	413	0.97
11	18	1.2e-08	0.00026	22.2	17.3	1	19	422	440	422	440	0.99
12	18	7.3e-05	1.6	10.1	5.3	9	19	488	498	486	498	0.89
13	18	0.024	5.2e+02	2.0	1.3	6	12	497	503	497	504	0.92
14	18	0.012	2.7e+02	3.0	5.5	3	11	509	517	508	518	0.88
15	18	0.3	6.7e+03	-1.5	3.3	14	18	547	551	547	552	0.85
16	18	0.17	3.8e+03	-0.7	0.4	8	12	568	572	567	579	0.79
17	18	0.0022	49	5.3	6.4	1	11	588	598	582	599	0.91
18	18	2	4.4e+04	-6.2	3.6	5	10	615	620	613	620	0.66

Sequence Information

Coding Sequence: ATGGCCCGGCGATACCACGACGCAGCTGCAAAATTGCAGCAAAATGTACAGAAACATTTGAAGGGAATGAAAGAGCTTTCTTCGTCGGAAGATGAGGAACCATACGAATCGAGCGTCCTCGAGGGCGTGCTGCAGAGCTATAGGAATGGCGGTGGCGATGCGCACATGCTCAACCGCACGAAAAACATGTTGGAGGAGGCTATAAGCGGCCGCCCAGTTACGTGTCTCATTTGCATAGGTTCCATCAAACGCGCCCATCCCATCTGGACTTGCGACCACTGCCACTCGTACTTCCATCTCTCCTGCATCCAGAAGTGGTCCAATGACAGCATTAGCCTACGTAGCGAGGAAAACCACGGCCCGATCGCCGTATTTGTGCCCAAGAAAATTGAATGGTGCTGTCCCAAGTGTCGCCAGTCGTATAGCAAAGAGGAAATTCCTCGCAAGTATCGCTGCTTCTGTAGCAAAACTGACGATCCTCCATTTCATCCATGGTTGATTCCACATTCGTGTGGAGAGGTGTGTGAAAAAAGGTTGTCAACAGGGGATAATTGCAAGCATAAATGTCTATTGTTATGCCATCCTGGTCCCTGTCCACCGTGCCCACAAACTGTCAATGGAGTATGTTTCTGTGAGAAGGAACGTAAGAGAGTACGCTGCAGCGCTGCAAAATGGTCTTGTGGccaacaatgtacaaaattaCTGTTGTGCGAATCTCATAAATGTGAGAATGTTTGCCACGAAGATGCCTGCCCTCCTTGTACGTACACAAGTGTCCAGACCTGTTTATGTGGAGCTGAGAAGGTCAAAAGACCATGCAATGATCCTGTATGGCGCTGCCAGAAGCATTGTAACAAACCATTCTCATGTGGTTACCATAAATGTGAAGAAATATGTCATTCAGGTGATTGTGGCGATTGTCCCAACTCTGGGATGCGGTCCTGTCCTTGTGGAGCTAATCAGAGATTTGTTCAGTGCCCTGATGTCATGGAGACCTGTATGGGGACCTGTGGGAAGACTAAGGATTATTGTGAACACACTTGCCCAGAGAAATGCCACAAAGGCCCCTGTCCTCCATGCCAAGTGTTGATTGAAAAAAAGTGTCAATGCGGCACACATGTGAGATCATTACCTTGTAGTAAGGAGTATAAATGTGAAACAAAGTGCCGAGGCATAAGACCTTGTGGAAAACATGGTTGTGCACGTAAATGTTGCAATGGAAACTGTCCGCCGTGTGAGAAAATCTGTGACAAGCCCCTGCAGTGTGGCCGTCATAAGTGCACAACAGTATGCCATCACGGTCCATGCTATCCTTGTCCCAGGGAATCCAAAGTAACTTGCCGTTGTAAAGAAACCTATGTAACAGTTCCCTGTGGTAGAGAGAAACACACTAAAGCTCCTAAATGTAGTCTCCTTTGCAAGCTTAAATATAAATGTGGACATGTAGAAGAAAACAAACATTCCTGCCATTTTGGTGATTGTCCTCCTTGTAAGGCAATATGTCATAAACAGTATGAGAATTGTGAGCATGACTGTAAAGCGGTTTGCCATGCCTTTGTTACAGTAGTGTTTAAGCAAGTAGAGAAGCCCGCTACACCATGGGAAGTGCAGCCACCAAAGACTAAAATAATGACTCTTGAATGTCCACCGTGTGAGATTCCAGTTCCTATTGTTTGTTTTGGGGAGCATGAAACAGCAGATCAACCATGCCACTCTGCTTCGCGACGCCCCTGTGGTCGCGAATGTGGCCGAGAACTTCCTTGCACTAAACACAAGTGCAAACTGCTGTGCCACTTGCACACAGCGAATCCTAACTATCCTAACGTTCCTTCTTCCTGCGAAACATGCAATAGAGAATGTCTAGCCCGAAGACCAGACAGGAGTTATGCGGAATATGAATGGAAATTGagtggaaagaagaagaaatataaAGAGAAGAAGGTTGTGGCCAATAGGGATGATCGGAATCGGTTGCAAAAGTATTGGATTCCAATGTTTTCGGTTTTGGTTGTTGTAATCGctgcaatttattttataatttatgtttga
Protein Sequence: MARRYHDAAAKLQQNVQKHLKGMKELSSSEDEEPYESSVLEGVLQSYRNGGGDAHMLNRTKNMLEEAISGRPVTCLICIGSIKRAHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRQSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRVRCSAAKWSCGQQCTKLLLCESHKCENVCHEDACPPCTYTSVQTCLCGAEKVKRPCNDPVWRCQKHCNKPFSCGYHKCEEICHSGDCGDCPNSGMRSCPCGANQRFVQCPDVMETCMGTCGKTKDYCEHTCPEKCHKGPCPPCQVLIEKKCQCGTHVRSLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYVTVPCGREKHTKAPKCSLLCKLKYKCGHVEENKHSCHFGDCPPCKAICHKQYENCEHDCKAVCHAFVTVVFKQVEKPATPWEVQPPKTKIMTLECPPCEIPVPIVCFGEHETADQPCHSASRRPCGRECGRELPCTKHKCKLLCHLHTANPNYPNVPSSCETCNRECLARRPDRSYAEYEWKLSGKKKKYKEKKVVANRDDRNRLQKYWIPMFSVLVVVIAAIYFIIYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00023391;
90% Identity: -
80% Identity: -