Cpom017170.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- gata5-b
- Assembly
- GCA_033807575.1
- Location
- CM066353.1:11102527-11103120[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-08 7.7e-05 23.5 0.2 22 35 2 15 1 16 0.91 2 3 4.2 1.5e+04 -3.1 3.7 18 27 87 96 79 97 0.66 3 3 2.1e-09 7.5e-06 26.7 0.0 6 35 115 145 114 146 0.77
Sequence Information
- Coding Sequence
- ATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgccacGACAAGCAGCGCAACACTGCACGGCGTGCCGCGCCCCACCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgccacGACAAGCAGCGCAACAGTACGTACCCACGTCACTAGTGAACACGAGATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgccacGACAAGCAGCGCAACAGTACGTACCCACGTCACTAGTGAACACGAGATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgccacGACAAGCAGCGCAACAGTACGTACCCACGTCACTAG
- Protein Sequence
- MVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDKQRNTARRAAPHRHAPRHHTHAPPPPAPRQAAQQYVPTSLVNTRWCATRAGCTTSCTACRAPPPCAATPYTRAAAARATTSSATVRTHVTSEHEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDKQRNSTYPRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -