Cpom017169.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- GATA4
- Assembly
- GCA_033807575.1
- Location
- CM066353.1:11091981-11102365[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-18 3.5e-14 53.4 3.0 1 35 358 391 358 392 0.98
Sequence Information
- Coding Sequence
- ATGAAGAACTTGGAGAGCCGGCAGGCGGCGGTCAcacttttacaaataaaaaactacgACCCGAACAAATACGCTGTTAAAGCCGCGGAAGATCATCATATTGTGTTCAACAGTGTGCCGAGCTTGCCGCCATCAGAGCGAGCGAGAGAAGTAATGCACTGTAATGCCGTCATCGACATCATAAGCAAAGCCGTAGCAGTAGCGCAGCGTGAGAACGAGGAATCTCACAAATATCCACCGAATTATTCAACTGTTATAGAGCGGTCGAACCCGAGCGAAGTCAACTACACGCACGAATACCCTGAAGAGCAGTACAGCAATGCTTAcagcgcgccgcccgcgcccagTCCCGGCAGCCACGAGGACCAGGAACATAAAGAAATGGACTTGTCCCTGTATGGAGGCGTTAAGAACGAGCCTGTCGAACAAACTGAGCCCGCAGAGGATCAAAACTCTTACTTCCACAAAGCGCTTAGCCACAAGCAATCAAATTTCTCCGATGAGTACAAGCAGCACGTGTTCGGGCGGTCGGGGAACAAGAAGTCGCGGAACTCGTCGGTGTACGAGGAATGCAGTCAGAGCAGTAGCGGCTCCGATCCCGACCGACTGCAGATGGATATCTCTCAGATGTCGCAGGACGACCCAGAGGAGACGCAGTCGGCGAGATCGGCTCAGTCGTCGCCGCAACCGAGGCAAGAGGGAGACGGCGACAAAGACTCTCTGTGGCAAGCTCTTAACAGACAAAATGGTCGCGGTGGAGAAGCAACCCAGCTACTGAAACGGCTCATCAACAGCAAGCACCTCGGGATGACAGTGTCACCTTTGCGGGCGTCCACGTCGCCCATGCCGCTGCCAGTGCCCAACGGCACGCATTCACCGAACGGTGAATGGCAGTCTCGAGCAGCGGGGCCCGCCGGCACGGCGCGCAGGAAGCAGAGCTTcccggcgcgcgcgcagcccgcTGCCGCGCCCGCGCACAGCGACGCGCCGCACTGGCCCGCCGCGCCCGACAACCAAGAGGCATCAGACACGTCAACGGGTTCCCGCTCCGCGCCGCGCGTCGAGCTCTCGTGCAGCAACTGCGGCACGCACACGACCACGATATGGCGGCGAGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCGTGCCGCGTCCCACCGCCATGCGCCGCGACACCATACacacgcgccgccgccgcccgcgccacGACAAGCAGCGCAACAGTACGTACCCACGTCACTAG
- Protein Sequence
- MKNLESRQAAVTLLQIKNYDPNKYAVKAAEDHHIVFNSVPSLPPSERAREVMHCNAVIDIISKAVAVAQRENEESHKYPPNYSTVIERSNPSEVNYTHEYPEEQYSNAYSAPPAPSPGSHEDQEHKEMDLSLYGGVKNEPVEQTEPAEDQNSYFHKALSHKQSNFSDEYKQHVFGRSGNKKSRNSSVYEECSQSSSGSDPDRLQMDISQMSQDDPEETQSARSAQSSPQPRQEGDGDKDSLWQALNRQNGRGGEATQLLKRLINSKHLGMTVSPLRASTSPMPLPVPNGTHSPNGEWQSRAAGPAGTARRKQSFPARAQPAAAPAHSDAPHWPAAPDNQEASDTSTGSRSAPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDKQRNSTYPRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00409943; iTF_00872023; iTF_00150150; iTF_00660946; iTF_00681336;
- 90% Identity
- iTF_00872023; iTF_00409943;
- 80% Identity
- -