Basic Information

Insect: Cydia pomonella
Gene Symbol: zfy1
Assembly: GCA_033807575.1
Location: CM066370.1:2263362-2285686[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.2 1.9e+02 4.1 0.8 1 23 227 250 227 250 0.94

2 11 0.00084 0.07 14.8 0.4 1 23 257 279 257 279 0.98

3 11 2.3 1.9e+02 4.0 1.2 1 10 283 292 283 306 0.74

4 11 0.71 60 5.6 2.2 1 23 313 335 313 335 0.85

5 11 2.3e-05 0.0019 19.8 0.3 2 23 340 362 339 362 0.93

6 11 3.6e-05 0.003 19.2 1.7 1 23 368 390 368 391 0.95

7 11 0.04 3.3 9.6 1.4 3 21 402 420 401 425 0.91

8 11 4.4e-05 0.0037 18.9 2.0 1 23 433 456 433 456 0.94

9 11 0.00022 0.018 16.7 2.2 1 23 461 484 461 484 0.98

10 11 1.1e-06 9.1e-05 23.9 3.3 2 23 492 513 491 513 0.97

11 11 1.5e-05 0.0013 20.3 1.4 1 23 519 542 519 542 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.2	1.9e+02	4.1	0.8	1	23	227	250	227	250	0.94
2	11	0.00084	0.07	14.8	0.4	1	23	257	279	257	279	0.98
3	11	2.3	1.9e+02	4.0	1.2	1	10	283	292	283	306	0.74
4	11	0.71	60	5.6	2.2	1	23	313	335	313	335	0.85
5	11	2.3e-05	0.0019	19.8	0.3	2	23	340	362	339	362	0.93
6	11	3.6e-05	0.003	19.2	1.7	1	23	368	390	368	391	0.95
7	11	0.04	3.3	9.6	1.4	3	21	402	420	401	425	0.91
8	11	4.4e-05	0.0037	18.9	2.0	1	23	433	456	433	456	0.94
9	11	0.00022	0.018	16.7	2.2	1	23	461	484	461	484	0.98
10	11	1.1e-06	9.1e-05	23.9	3.3	2	23	492	513	491	513	0.97
11	11	1.5e-05	0.0013	20.3	1.4	1	23	519	542	519	542	0.95

Sequence Information

Coding Sequence: ATGGAAAATAAGCACACTGTTGTTGATAAATTGCTGTGCATGGCGTGTCTGTGTGTGGGCAGGACCCTGCAGAAAGTTACGGACGAGAGAATGAAGCAGTTTTATTTGGACACCTTAAATGAAATTCCACTATGTGATGTGCCCCAAGTTTGTCCAAACATTTGTTGGGAGTGTGAGGCTCTGTTACGGAAAGTGATTTCTTTCAAGGAACAAGTTATGGACTCCTACAGAATTCTCCAAACTTATACTTATGAGAACCTGTTTGAATGCCTGCTAACAGACATAAGCCGCCCGCCGCGTCTGCTAGTCCGAGTCAACAGCCCTGTCAACATCACCCCAGACTCGGAGGACAAGCCCAATGTACAGAAGGACATGCAGTTCACCGTGTATGTTAAAGATGAGGTGAAGATTGACTGGGATGATGATAGAGATGACCTAGACATAACGCCAGCTGAACTAGAGGACCCAGTGGTGGACGAACCAGAGAACATCAAGACATTGAAGACTGAGACCGGGAAGAAACGGAAGAAGAAAGTGAAGAAAACtagtttgaagaaaaaaactaaGAGCCATAAACAAAAATCCGACGGCAAGATAATAACCATAGAGCTATCCTACGAAGAAATGTTAGCGGAGCGCGAGAAAGAGGCGACCAGAGACAACTATCTGAAGGCCCAGTACAAATGTACTACATGTATTATAGGATATAATTATATCAAGTCATATGAGGCACATATGACTAATAAGCATTCTTCTTACTTGGGCGAATACAGCTGTCCGATATGTAAAACCGTCATTTCATCCGTGGACTCTTTCACCGCGCACTACAAAAGACACATGCGAAGGTACGAATGCAGTATATGTCACAAACGCACATTAGACATGAAAGTGATGCAGCAACACTATTACTCCACACATGAAATATCTCTCAAGCAATACAAATGCAATCTCTGCGGGAAAATATCCAATTCCATAGATTCTCACCGGTACCACAAGGACACACACAAGGCGCGGGTGCAGTGCCCTGAATGCGACAAAAACTTCAGCCACAGAGCCGGCCTCATGAACCATAGACTTGCAGTGCACGAGCTACAGAACGCGTTTCCTTGCACAGTGTGTGAAAAAGTGTTCAGGTGGAAGGCCAGTTTGAAACGACATATGGAGAAACATCACGTTAAGgacaGGATGGCTTCAGCGGCCTACTGCGTCGCGTGCGGCATCAGCTTCTCATCCGTGTGCTCGTACCAGCGGCACATGAAGAACAGCCTCAAACATGTCACGCAGGAACAGCTCAGATTCATCTGCGACCACTGCAACAAGCGTTTTGCGGACAAGACGAAACTCCGGGACCATATAGAAGAAAaacatttacacaaaacctACCAGTGCCACATATGCCATAAGCCTTCAAAAAATCGTGTGGGTTTGGATCAACACATACGGAACGTGCATCGCGGCCGACCGAACAATAAGATGTGCCACCACTGCGGGAAAGGGTTCCCGACCAAGGTTCAGTTGGAGTCCCACATAAGAACACACACCGGAGAACGACCGTTCATTTGCGAATTCTGTCCGACAACCTTCTCGCAGCAGTCCAACCTGTACAAGCACAACCGACAGGTCCATCTCAACATCAAGTCCAAACGCTACCCGCTCTGCAAGAAGCCCAAAACGGAGGAAATGCACAAACCTCCAAACATGGAGGAGTTCCGCCCCGTCGCCGTGCTGCACTTCGAGCCCGAGCGAGGGTTTCTATGA
Protein Sequence: MENKHTVVDKLLCMACLCVGRTLQKVTDERMKQFYLDTLNEIPLCDVPQVCPNICWECEALLRKVISFKEQVMDSYRILQTYTYENLFECLLTDISRPPRLLVRVNSPVNITPDSEDKPNVQKDMQFTVYVKDEVKIDWDDDRDDLDITPAELEDPVVDEPENIKTLKTETGKKRKKKVKKTSLKKKTKSHKQKSDGKIITIELSYEEMLAEREKEATRDNYLKAQYKCTTCIIGYNYIKSYEAHMTNKHSSYLGEYSCPICKTVISSVDSFTAHYKRHMRRYECSICHKRTLDMKVMQQHYYSTHEISLKQYKCNLCGKISNSIDSHRYHKDTHKARVQCPECDKNFSHRAGLMNHRLAVHELQNAFPCTVCEKVFRWKASLKRHMEKHHVKDRMASAAYCVACGISFSSVCSYQRHMKNSLKHVTQEQLRFICDHCNKRFADKTKLRDHIEEKHLHKTYQCHICHKPSKNRVGLDQHIRNVHRGRPNNKMCHHCGKGFPTKVQLESHIRTHTGERPFICEFCPTTFSQQSNLYKHNRQVHLNIKSKRYPLCKKPKTEEMHKPPNMEEFRPVAVLHFEPERGFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00409581;
90% Identity: iTF_00410674;
80% Identity: -