Cpom026415.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- -
- Assembly
- GCA_033807575.1
- Location
- CM066360.1:5514412-5528278[+]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.6e-25 3.4e-20 73.6 0.4 1 121 38 152 38 180 0.89 2 3 0.00055 24 5.0 0.0 91 142 151 198 142 201 0.83 3 3 8.3e-75 3.7e-70 238.0 0.0 92 352 195 447 180 448 0.92
Sequence Information
- Coding Sequence
- ATGCATTTACGGACTTTGGTGTTAATTTCTGTGCTTTCTTTAGCTTTTGGACAGGACAGGAAGATAACTCCAACACTAAACCCAGACTGCAATGCATGCTCGTCAAACACAACCCTCGTCTACATAAAAGCCGAAGGCTCCCACGATACCATACACCAGCTATGGGACTTCACGCAGGGGACTCCGACCATCATCTATGCTGTTGCTGGTGTCAACTCCTCACTGCAGGTCAAATGGGCACATGACAGACCTGTTAAGTTTAATATGTCTGAAGACCCGAGTTACAGCTTTGCTATGGCTATTTCTGatATATATGAATACAACGATCTAGAAGACCGAGGCCATCCGAACAGCAGCACCAAGTTCAGGGCTTTCCCTCTAAAAGAGCTGACCTGGGCGCGGCAAGACAGTGTGTTCACAGAACAGGAGGCCATGCTCGTGATGGAAGCAGACAAGTCTTTCCCTCTAAAAGAGCTGACCTGGGCGCGGCAAGACAGTGTGTTCACAGAACAGGAGGCCATGCTCGTGATGGAAGCAGACAAGTACAGTCGGGATAGGAACGGGACTGTCGCTATTAAGGTACGGTCTTTCCCTCTAAAAGAGCTGACCTGGGCGCGGCAAGACAGTGTGTTCACAGAACAGGAGGCCATGCTCGTGATGGAAGCAGACAAGTACAGTCGGGATAGGAACGGGACTGTCGCTATTAAGCTCGACCTCCTACCATTCCGTGACTACGCAGTTCAACTACCTCACCTCATCCACACAGCCAACTCAACATTAGTAGACGTCCAACTGGCCAACCTGACGCAGTCGCGCGACTTTAACTCGTCGCGATTTGCGCTGCGACTGATCTTAGTCGCGTCGGACGCGGACGGCACGATGTCGCGACGCGTAGTGAAGAGTTTAGATGACGAGCACACGCCTGGGGTATTCGAGATCATCGAAATCAAAACGCCCCGGTGTGCTAGCACCGGCGCGGGCGGTTACATGCAGTTCCGACCCGTCGCTTATATACAGAAGGAACGCAGCGTCACCTCGTCCACCGTCGTCCACCTGTCGGATTTCAACAGTACGTATATAGTTCCGCCGAGCACGTTGACCCGTTTCTACCCTAACATCGACGAGATGCTAATAGAAGACATGATCGTGTCCTTCGGCGAGCCTCAGGACGGGTTCTACAGGCAACACAACTATACTGCTTGGTCCACAACATTCGGTTACGGCGCTCCACCCGTCGAAACCTTTTCTCTATTCGTTATATTAGTGATCACCATCGGGCTGTCCGTGCCGATTCTACTAGCGCTCTCCGGCGTGCTGTACGTGGTGGCGCGGCGCTGCCGGCTCGGGAACGGACCCACGAGGCTGCGGGAGGAGTGA
- Protein Sequence
- MHLRTLVLISVLSLAFGQDRKITPTLNPDCNACSSNTTLVYIKAEGSHDTIHQLWDFTQGTPTIIYAVAGVNSSLQVKWAHDRPVKFNMSEDPSYSFAMAISDIYEYNDLEDRGHPNSSTKFRAFPLKELTWARQDSVFTEQEAMLVMEADKSFPLKELTWARQDSVFTEQEAMLVMEADKYSRDRNGTVAIKVRSFPLKELTWARQDSVFTEQEAMLVMEADKYSRDRNGTVAIKLDLLPFRDYAVQLPHLIHTANSTLVDVQLANLTQSRDFNSSRFALRLILVASDADGTMSRRVVKSLDDEHTPGVFEIIEIKTPRCASTGAGGYMQFRPVAYIQKERSVTSSTVVHLSDFNSTYIVPPSTLTRFYPNIDEMLIEDMIVSFGEPQDGFYRQHNYTAWSTTFGYGAPPVETFSLFVILVITIGLSVPILLALSGVLYVVARRCRLGNGPTRLREE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -