Cpom010461.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- CSRNP3
- Assembly
- GCA_033807575.1
- Location
- CM066348.1:19418997-19421228[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.25 1.1e+04 -2.7 3.5 62 103 27 65 8 90 0.42 2 5 1 4.4e+04 -5.2 6.6 66 87 63 84 27 158 0.56 3 5 0.3 1.3e+04 -3.0 0.0 38 64 166 193 138 211 0.49 4 5 3.7e-104 1.6e-99 333.5 7.7 1 218 216 425 216 425 0.94 5 5 0.24 1.1e+04 -2.6 0.8 62 102 656 698 623 718 0.37
Sequence Information
- Coding Sequence
- ATGGCAGACACAACACTACCCAAGAATCAGCTGGATGAAAATCCAGACGCGACAAAGGACATTAGTGATCAAGAAGCGGTTCGAAACACAATGGAACCCAGAAATGTAGAACAAGAATCTTTATTTGTGATAAAGGACGAAAAAAATAGTGATAGTGATGTCAACAGTGACGATCTTAGCTCAAATGATGAACAAAGCCATGTTGATACCAGCAATAACTCTCAGTTTTATGAGAATACCGATAGCAAAGCAGATTACGCTATTAAAAGTGATGATAATGATACGTTAAGTGATATAGATGATATTAAGACGGACACTGCATCAGCTGACAGCGAAGACTCGGCGCTCGGTAGCCTGCCTCCTGACAGCACCAGCAATGATCGGGACGAAGAGGCCCAGGACCGTTCAGACGGAAGTGACTCTGGTATCGGATCAGAAACTATAGAAGAACGAAAGTTTAATCTTGAACTGCCATGCACGAGCGGCCTAAATAATGCTGAAAGTCACGAACACTCAGCCGGTCTAAGTAACAGTTTTAAAAATGAATTCACAGAAGAAAATTCTGAAGCACAAAGCCAGAAACCCCTTCGAAGTAGTCTTAAAAGAAAATGTAGCGACGAAAGTCAAGAAGAACCACCgatgaaaaaaagaaaagaggGGATTAAATTTGATAACGTTACTGTTTACTATTTCCCTAGGACCCAAGGATTCACCTGTGTTCCATCCCAAGGCGGTTCTACTTTAGGGATGGAAAGAGAACACACTCACTCGCAAAAGTTTACGCTGGCAGAGCATGCTTTAGAACAAAGAAGACTACATAGGCAAATTTTGCAACAATTGAAAAGTGAACGTCATTCATTGCAAGGAGCGGCGCTATCTTCTAGCGAGGATAGTGACACGGAAGAAGAAGCAAGCGATATTTCTGAATCTGAATTAGATTTAGATAGCTATTACTTTCTACAGCCAGTACCCACACGGCAAAGGCGAGCTCTTTTACGGGCAGCGGGAGTACGAAAAATTGAAGGCTATGAAAAAGACGAGTGCCGGGACATAAGAACTTCGCGAGAGTTCTGTGGATGTGCTTGCAAAGGAGTCTGCAATCCAGAGAATTGCTCATGTAGTTTGGCTGGCATAAAATGCCAAGTTGATAGATTAAACTTCCCCTGTGGCTGTACTAGAGATGGGTGTGGCAATACCACAGGGCGAATAGAGTTCAACCCTGTGAGAGTTCGGACACACTTTATTCATACTCTCATGCGATTGGGGTTAGAGAAGAAAAACGAAGAAAACCAAGCAGCAAAAAGACAATGGGTTGAAGCTCACAGTACCAATACAGCTTCTTGTGTTTCAAACACATCATATGATAGAGAACGCTGTCTAACGCACGAAGATGGGTTACTACGCGACGTCAACTTAACTCCGAGAGTAGAAGTGGAATCGTGTGTAAATGCTGGAAGTTTTAACAATGTGCACTGCGACATGAACAATGTTGCCATTCAAAGCAGTAATATGCAGGAtaacaaaaattacaattacgCAAACAATGCATTAAACCATagaaatattaatgaaaatagTGTTATGCATTTTGAAGAGAATCTCCATAGCAACCGCGCGGACTCTTATACATGCAATATACTTCAAGGTAAAGGCCCCCCTTACTCCATGCCTAACAGTATGGGCTTCGACATGTCGAGCAATGTACAAAGGTTTCACAACGATCTCAACTATGTTTATGGACAGCAATCTGATAATAATCATTTCAAGGGATTGCAAACGAGCTTCTCTGCAACAAGTTTCGAAGAGTTCGCCCACAACTCCCATATTTCTATGTTTAGTCACTACGGCCATATGTACGTTCCGGATTACAGCCACAAACCGAGCACAAGCCTGCACGAGCATGACTCAATGCAGTATCCTTTATCTCAGAACCACTACGGCGTATACAAGAACACTACGGAGTGTATGAATACTGAGAACAAGCCAGATTCTCATTACAACATGATGTTGCCATATCAAACTAGCAATAAATTGCAAACAGAGGAAAACGATGAGAATTGGTTCAGTCACAATACCCTGCTGAACCTGGACCACTCGGACCAGACGACGCAGGACGCGTCAGACCTGCAGCAGCAGATCGCGGCGCCGCCGGCTGAGACCAATGCTACCGAGACTACTGACAATTTCGGTGAATTAATTAAGAAAACTATGGTAGAATCTGTTACTGTGTAG
- Protein Sequence
- MADTTLPKNQLDENPDATKDISDQEAVRNTMEPRNVEQESLFVIKDEKNSDSDVNSDDLSSNDEQSHVDTSNNSQFYENTDSKADYAIKSDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSTSNDRDEEAQDRSDGSDSGIGSETIEERKFNLELPCTSGLNNAESHEHSAGLSNSFKNEFTEENSEAQSQKPLRSSLKRKCSDESQEEPPMKKRKEGIKFDNVTVYYFPRTQGFTCVPSQGGSTLGMEREHTHSQKFTLAEHALEQRRLHRQILQQLKSERHSLQGAALSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPENCSCSLAGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIHTLMRLGLEKKNEENQAAKRQWVEAHSTNTASCVSNTSYDRERCLTHEDGLLRDVNLTPRVEVESCVNAGSFNNVHCDMNNVAIQSSNMQDNKNYNYANNALNHRNINENSVMHFEENLHSNRADSYTCNILQGKGPPYSMPNSMGFDMSSNVQRFHNDLNYVYGQQSDNNHFKGLQTSFSATSFEEFAHNSHISMFSHYGHMYVPDYSHKPSTSLHEHDSMQYPLSQNHYGVYKNTTECMNTENKPDSHYNMMLPYQTSNKLQTEENDENWFSHNTLLNLDHSDQTTQDASDLQQQIAAPPAETNATETTDNFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462401;
- 90% Identity
- iTF_00409294;
- 80% Identity
- -