Cpom002504.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- -
- Assembly
- GCA_033807575.1
- Location
- CM066344.1:41177672-41179504[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-06 0.016 16.5 0.1 22 43 519 541 510 543 0.91 2 2 8.7e-09 2.1e-05 25.8 0.1 15 46 564 597 550 597 0.82
Sequence Information
- Coding Sequence
- ATGGAAATAGATTCAGAAACAGAAAATGATATCTTAAGAGATTTGGCGCGACTACAACTATCTAAATTTGAATCAAGTGCTGACGAAAGCGTTTTACCGGGAGAAGATATGAACAAAGAGCACACTGAGCCTTTGTCATGGACCAACCCACCTTCCCGCGAGGCCCGTGAGCTAATCGTAGCCGAGGAGATCTTACGCTTTGCCACTATTACTGAAAGACCGTTCACATCTTTAAGCACACGAGCAATTCAGGCAGCCCCGGAATTGATATCTGTTACCCCAAGTAATACGACTAAGAAAATTAATGAAGCTACGGCGCATCTAACTTCTGAGGTTGCAAATGGGGATGAGATGCCTGCGGTTAATCAGGCGCCTTCAAGATCCACCCGCATTGCCTCAGATGCTGGACCAAACGGCTCACAGCAGCCACTTCAAAGTGCGAGTTTTGAAGTGTCACCACCATTAGTGTCCAATTCTCCAGATGCTTATTTTCCGGAAAGAGAAGCTGCTTTTCCAATTGAACCCCAAAAAAACAATTGCCCGTACCGCTTACCAGTGTTTAGGCCGAATATAGTACCTGTCACAAATCGAATACTTGCGGCTATAGCTCAAAATGAATTGGAACGCCCTACGTCTAATAGTCCAGTGGTACTACAGCCGACGAGCAACGGTGATATGAGCCAATACTGGCCGCGTAACAATGGCCAACTGTTTCAGTATTTTCTTGAACATTTAAGATTTATTCAAGGCTCAGATTTGTCTAGCTCATCAAGCCCTGATTCTCAAGGTCCAAGTCGCAGTTTTTCGCCGGTATTGAAACCGTCGATAAATAATTCTAATGATGAAATATCATCATTAAATCAGCACATATTGCTGACTACTAAACTTGAAGAAATGGTTACTAAGAATTTAAAGGTAATAGTCTCAAGCATGCTAAAGTATAAATTAGAATTGAAATCATTAAAAGAGGAACTAAACACTAAATTGACACTGTTACAGAATATAATGGATGAGACTGGTGTTGAAACAGTGGAAGGAGGTAACAATTATAAAGATGTTAATATTGACGTCAACAACGTTAATAAGGAAGAGGTAAACCCACAAGAGGGAACATCAGGAATTAACAGGAAGGGAATTCCATTGGAGGCTGTTGATGTAGATAATACTTGCGACCCATGCCACTTACGGCCATGCCTAAGAAATCACAACCCAAATATTTCTAATCTATATTTTGAAAACGATATAAACCTTAACAGAGGAGTGGATGCTTCATGTGAAAACGTAGCTCAGTCGGAATATCCCGAGGAAGATAAGTCGTCAAGAACAGAGTGGACAAGGCCAGAGAAACGAAGACTTGGTATTGTAATAAGAGACTTTTCTAGATCAATGAAGACAAAGGAGTTGCAACATAagaaatctaatttgcttaaaaaGGGCAGAGTTATTGCACAAGccattgaaaacaaaatttgtaaaattgaCCAAGAAATCATGGATGTGCATAAGAAAACCTTGAGGCAAGTAGCACTTCCACTGAACCAGATTCAAGAGTATGATTGGGTTAAGGTGGCGAGTGTGTTGAATGCTAAGCGATCACCGGAAGAGTGCCGAACGCATTGGAAATGTTTCCTTCACCCGAGCATCAATAACGGCGAATGGACTCTAATTGAAGCCAGAGCGATGGAAATTATAGCCCAACGTCACAACTTCCGAAACTGGGACGACATTGCAGAGGAACTTAATACTGGGAGAAGTGGTTATCAGTGTTACCAGTTCTTCCGTAAATACTTGTGTCCCCATTTAGAGTTACGCGGCCAATGCAACCATAAGTAA
- Protein Sequence
- MEIDSETENDILRDLARLQLSKFESSADESVLPGEDMNKEHTEPLSWTNPPSREARELIVAEEILRFATITERPFTSLSTRAIQAAPELISVTPSNTTKKINEATAHLTSEVANGDEMPAVNQAPSRSTRIASDAGPNGSQQPLQSASFEVSPPLVSNSPDAYFPEREAAFPIEPQKNNCPYRLPVFRPNIVPVTNRILAAIAQNELERPTSNSPVVLQPTSNGDMSQYWPRNNGQLFQYFLEHLRFIQGSDLSSSSSPDSQGPSRSFSPVLKPSINNSNDEISSLNQHILLTTKLEEMVTKNLKVIVSSMLKYKLELKSLKEELNTKLTLLQNIMDETGVETVEGGNNYKDVNIDVNNVNKEEVNPQEGTSGINRKGIPLEAVDVDNTCDPCHLRPCLRNHNPNISNLYFENDINLNRGVDASCENVAQSEYPEEDKSSRTEWTRPEKRRLGIVIRDFSRSMKTKELQHKKSNLLKKGRVIAQAIENKICKIDQEIMDVHKKTLRQVALPLNQIQEYDWVKVASVLNAKRSPEECRTHWKCFLHPSINNGEWTLIEARAMEIIAQRHNFRNWDDIAEELNTGRSGYQCYQFFRKYLCPHLELRGQCNHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00409238;
- 90% Identity
- -
- 80% Identity
- -