Cpom027301.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- dnajc2
- Assembly
- GCA_033807575.1
- Location
- CM066361.1:182732-188519[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 8.4e+03 -1.8 0.3 6 16 298 308 297 310 0.81 2 3 0.0036 8.8 7.8 0.0 3 31 434 466 434 470 0.86 3 3 1.3e-13 3.1e-10 41.2 0.1 2 44 555 601 554 603 0.91
Sequence Information
- Coding Sequence
- ATGACGGAAGGCGAGTCTAGTAACAATACGCGGACCGTGGCGGTGCCGTGTCCGTTCGTAAAGAGGAAAGTGGAATGCGTCGGAGCGACGTTCTTGAGATACTTCAATATAAAATGCCACGGCGAGGATGCTTTGTTCGAAACGTCGACGGCAAACGAGAAATCGGAGGAGGTGGTGTTCGACGACGACGTGGAGTACCTGCGGAGTCTGGACCCTAAAGAATGGAAACAACAGGACCACTACGCGGTCCTGGGTATGAAACAGCTGCGCTACAGAGCTACGGACGATGACATTAAGCGCGCGTACAGACAGAAAGTGCTGCGCCACCACCCGGACAAGCGCAAGGCGCAGGGCGAGGACGTGCGCAGCGACGACGACTACTTCACATGCATCACCAAGGCGTACGAGACGCTGGGCACGCCCGCCAAGCGCCGCTCCTACGACTCTGTGGACCCGGAGTTCGACGACTCCGTGCCGACGGCCAGCGACGTCAAAAAGGAGGGCTTCTATAAGACGTTCACCAAGCTGTTCGAGCAGAACGCGCGCTGGTCGGAGAAGCGCAACGTGCCGCTGCTGGGTGACGACGACAGCCCGCGCGAGGCCGTCGAGCGCTTCTACGCGTTCTGGTACGAGTTCGACTCGTGGCGCGAGTTCTCGTACCTCGACGAGGAGGAGAAGGAGCGCGGGCAGGACCGCGAGGAGCGGCGCTGGATCGAGAAGCAGAACAAAGCGGCGCGGGCGAAGCTGAAGAAGGAGGAGATGGCGCGGATCCGGGCGCTCGTGGACCTGGCCTACGCGCACGACCCGCGCGTGCAGCGCTTCAAGCAGGATGACAAGGACAAGAAGCTGGCCGCTAAGCGCGCTCGACAGGATGCCGTGCAAGCGAAGAAGGCGGAAGAAGAAAGGCTCATAAAGGAGGCGCTGGCGGCCAAGCAGAAGGCCGAGGAGGCCGAGCGCGCGCGGCTCGAGGCCGCCCGCGCCGAGCGCGACCAGGTCAAGAAACTGCTGCGGAAGGAACGTAAAGCCCTCCGAGACACGTGCAAGGCCAACAAGTACTACGCGCAGACGGACGACGAGGCCGTCGCGCACATGGCGGCCGTGGAGAAGATCTGCGAGATGATGAAGGTCCTCGAGCTCCAGCAGCTGGTGAAACAACTCGAAGCCGACGGCCGGGACGCCTTCCTGCTCACCGTCAAACTGGCCGAGGACAGGCTGGAGGAGGAGCGGCAGTCGCTCTTCGAGACCAAGAAAGAGCAAGAACAGAAAGTCAAGAAGGAGCTAGCGTCTAAAGTACCCATCGAATGGTCCGCCGACATGACGCAGTTACTCATCAAAGCTGTGAACCTCTTCCCCGCCGGCACCAGCCAGCGCTGGGACGTGGTGGCCAACTTCCTCAACCAACACGGAACGTTCATAGACGATAGACGCTTCAACGCTAAAGACGTACTCGCCAAAGCCAAGGACCTCCAGAGCTCAGACTTCTCTAAGAGCAGTCTCAAGAAAGCCGCCAACGAAGAAGCGTTTGACACATTTGAGAAGGAAAAGAAGAAAGCGGTCAGCGTTGATGACAACAGCATATCAAAGAGTGACAGCGGATCCAAGCTAGTCAATGGAACAGCCAAGCCTAAAATGAACGGAGACGTACCTAAAGAAGTCAAAGAGGTACCCTGGACGAAAACAGAGCAGGAGCTCCTTGAGCAGGCCATCAAGACCTTCCCGGTCAGTACTCCGGAGAGATGGGACAAGATCGCAGACTGCATCCCCAACCGGTCCAAGAAGGACTGCATGAAGAGATACAAGGAACTAGTAGAATTGGTGAAGGCCAAGAAGCAAGCCGCCAACTTagctaaataa
- Protein Sequence
- MTEGESSNNTRTVAVPCPFVKRKVECVGATFLRYFNIKCHGEDALFETSTANEKSEEVVFDDDVEYLRSLDPKEWKQQDHYAVLGMKQLRYRATDDDIKRAYRQKVLRHHPDKRKAQGEDVRSDDDYFTCITKAYETLGTPAKRRSYDSVDPEFDDSVPTASDVKKEGFYKTFTKLFEQNARWSEKRNVPLLGDDDSPREAVERFYAFWYEFDSWREFSYLDEEEKERGQDREERRWIEKQNKAARAKLKKEEMARIRALVDLAYAHDPRVQRFKQDDKDKKLAAKRARQDAVQAKKAEEERLIKEALAAKQKAEEAERARLEAARAERDQVKKLLRKERKALRDTCKANKYYAQTDDEAVAHMAAVEKICEMMKVLELQQLVKQLEADGRDAFLLTVKLAEDRLEEERQSLFETKKEQEQKVKKELASKVPIEWSADMTQLLIKAVNLFPAGTSQRWDVVANFLNQHGTFIDDRRFNAKDVLAKAKDLQSSDFSKSSLKKAANEEAFDTFEKEKKKAVSVDDNSISKSDSGSKLVNGTAKPKMNGDVPKEVKEVPWTKTEQELLEQAIKTFPVSTPERWDKIADCIPNRSKKDCMKRYKELVELVKAKKQAANLAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289567;
- 90% Identity
- iTF_00871247;
- 80% Identity
- -