Cpom018536.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- kn
- Assembly
- GCA_033807575.1
- Location
- CM066354.1:10989299-11003847[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-45 6.1e-41 141.7 0.5 182 249 3 73 1 88 0.92 2 2 0.045 1e+03 -1.0 0.0 538 564 139 162 72 175 0.49
Sequence Information
- Coding Sequence
- ATGATTAGatttttcctgaagttttttttaaagtgcaaTCAAAATTGTTTGAAGAATGCCGGCAACCCTAGAGATATGAGAAGATTTCAAGTGGTAATATCAACGCAAGTGATGGTCGACGGTCCGCTGCTGGCGATATCGGACAACATGTTCGTCCACAACAACAGCAAGCACGGCCGGCGCGCCAAGCGGCTCGACCCGACTGAAGGTATTGACGCCGCATCCGACACCACTTTGTCCCTGGGCCCGTATCATCCGGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAATTCAAAAAGCTCGGCTGACTGTCCGGCAAACACTCATACAAAATGCACCGCGAGCGATATGAAAGGGGAGGAGAGTAAAGAGACTAAGCTAAGGAGCGCCTTTGCGGTCGTCAGGCAGAGTCCGCCGCGCGCCGCCAATTTTcaacatcatcagaactggcaACATCTCGCCGTTCAGtgttag
- Protein Sequence
- MIRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAASDTTLSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNENSKSSADCPANTHTKCTASDMKGEESKETKLRSAFAVVRQSPPRAANFQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -