Cpom039433.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- Jarid2
- Assembly
- GCA_033807575.1
- Location
- JAPFFR010000174.1:130407-139248[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-17 1.3e-13 52.4 0.0 7 88 252 330 248 331 0.89
Sequence Information
- Coding Sequence
- atgaagaagaaacCGAAAGTTGCTCCGGTCAAAGAGAAGAAAACGTTACCGAAGCGTGCGGCGAAGGCAGCCCCTGCGCCCCCTGCCCAGGAAGAGGTGGCCACCAACACGAGACTTCTCAGGAACTCCCGCGACCCTCCGCCGCCAAACCCGGACGTGTACGAGTTCGACGAACTAGAAGGCTCTCGGCCTCCCTCGGGCCTCCGCCGCCGCAACCAGCCCACCCCCGACCCCCCCGCGCAGAGCCCCGAAAGCATACAATACATGGACATATGCCCTACAAGCTCTCAACTAGCCAAAATTAATACCAAACAAAAAGAAGTTGGGAACGTACTTAGTGTCAGCTTGGTACCTGAGGACGATATATATAAGAAGCGGAAGAATTTGATAGATAATCTGACGAATAGTCCAGCGCTGTTAAACAAGATTTTCAACTCCTTACCGACAGAACTTCAGAACGAGCTTGGGAGCTTGGCCACGGAGGGGACTGGGCGGGAGGAGGCTTATTTGGACGAAAAGGCGGGGACGGTCTTAGAGGCACCCACGTACTATCCTACGGCTGAGGAGTTTGAGGATCCGATAAAATACTACGACAAAATCGCCCCCGAGGCCTCAAAATACGGCCTCTGCAAAATAGTTCCCCCTGAAAACTTCAAACCAACATGCACGATGAGCGACACGATCCGCTTCGCGGTCATATACCAGTACATCTCCAAGATGTTCAGCCGCTGGGGCCCCGTGTCCAGGGAGCTGGCTGCCATCAAGGCGCACCTGCGGACCCAGAGCGTCGTGTTCGCGCGGTCTCCCCTCTTGGACGGCAGCGAAGTGAACCTCCCCAGGCTATACCACGCCGTGGAACGCAACGGCGGTCTCAGCAACGTCATACAACGCATGCGGTGGGGCCGCGTCGCCGACGAGATGAAGCTGACCAAGTTGCAGCACCCGGAGCGCAAGCTGGACCCCATATACATGCGATATCTGCTGCCCTACGCCACGTTGTCCGATCCGGGCCCGAAGTCAGGCGACGGCGGGAGCGGCCCGCAGCCTGGCGGTCCCTGGCTGTGA
- Protein Sequence
- MKKKPKVAPVKEKKTLPKRAAKAAPAPPAQEEVATNTRLLRNSRDPPPPNPDVYEFDELEGSRPPSGLRRRNQPTPDPPAQSPESIQYMDICPTSSQLAKINTKQKEVGNVLSVSLVPEDDIYKKRKNLIDNLTNSPALLNKIFNSLPTELQNELGSLATEGTGREEAYLDEKAGTVLEAPTYYPTAEEFEDPIKYYDKIAPEASKYGLCKIVPPENFKPTCTMSDTIRFAVIYQYISKMFSRWGPVSRELAAIKAHLRTQSVVFARSPLLDGSEVNLPRLYHAVERNGGLSNVIQRMRWGRVADEMKLTKLQHPERKLDPIYMRYLLPYATLSDPGPKSGDGGSGPQPGGPWL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -