Cpom033237.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- Kdm5d
- Assembly
- GCA_033807575.1
- Location
- CM066366.1:11988280-12001740[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-25 1.3e-21 78.0 0.0 2 89 101 184 100 184 0.93 2 2 6.2 1.2e+04 -2.0 0.0 42 65 673 696 670 708 0.72
Sequence Information
- Coding Sequence
- atgggaAAATGTGACGAAGCCAATGTTGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACGTTCAGCGTGCCCCCGGAGGCGCCCGTGTTTGAGCCGACGCCGGAAGAGTTCCTGGATCCTCTGGCGTACATCAGCAAAATAAGGCCAATTGCAGAGAAGTCTGGAATATGCAAAATCAAGCCCCCTGCGcACTGGCAACCCCCGTTCGCCGTGGACGTCGACCGTCTGAGGTTCACACCGCGGATACAACGGTTAAATGAATTAGAGGCTATAACTAGGGTGAAGCTAAACTTCCTGGACCAGATAATCAAGTTCTGGGAGCTCCAGGGCTCCGTCCTTAAGATCCCCACAGTCGAGAGGAAGCCGCTTGATCTCTACTCTTTGCACAAAATTGTTAAAGAAGCCGGCGGCTTCGACACATGTTCGGCGGAGCGAAAATGGACCAAGATCGCACGGCGTATGGGCCACCCACAAGGAAAGGGCATAGGCTCCATACTCAAGAACCACTATGAACGCATACTGTACCCTTACGACGTGTTTAAGAGCAGCGGCGCCGTAGACAAAGAGACGAAAATCGAAGTGAAAGGCGATCAGACCCCAGAAAAGGCGAACACCACACGGAGCCGCTCGAACTCAAAATGCCCGGCGGCGACCCCGCCGCCCCCGCGCCGCTTCAAGAGCAGCGAGCCCGAGCCCGCGGCCGAGGGCAGCCACACGGAGGGCGCGCTCGCCGGCGCCGACGAGCAGAAGGAGGTCAAGACACCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGAGGACAGCTATACAGAGGGAGCGTTAGCTGGCGCTGATGAAGAAAAGGAGGTCAAGATGCCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGAGGACAGCTATACAGAGGGAGCGTTAGCTGGCGCTGATGAAGAAAAGGAGGTCAAGATGCCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGAGGACAGCTATACAGAGGGAGCGTTAGCTGGCGCTGATGAAGAAAAGGAGGTCAAGATGCCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGACGACAGCTATACAGAGGGAGCGTTAGCTGGCGCTGATGAAGAAAAGGAGGTCAAGATGCCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGAGGACAGCTATACAGAGGGAGCGTTAGCTGGCGCTGATGAAGAAAAGGAGGTCAAGATGCCCATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCacaGTGATCAGCAGCAGTGAGTGTGATCCCGCGGCCGAGGACAGCTATACAGAGGGGGCGCTGGCTGGCGCTGATGAGGAGAAGGAGGTCAAGACGCCCATTAAAGAGGAGAAGGAGAATTGGGAGCAGAGCGGCAGTAAGTTTTTGTTTTGGTCTGTTGGAATGATTTTTAAAATAGCAAGCCTGTATTCGCGGCTGGACCAGCCATACAGAGGGGGCGCTGAAAAGGAGAGGGAGAATGGGGAGCAGAGACGCaGCAGCTATACAGAGGGAGCGTTAGTTGGGGCTGATGAGGAGAAGGAGGTCAAGATGCCCATTGAAGAGGAGGAGAATGGGGAGCAGAGACATaAGGGAGCGTTAGATGGGGCTTATGAGAAGAAGAAGGCCAAGACACTAATTAAAGAGGAGAAATGGGGAGCAGAGACGCAGGAGTCTGTATCCGCGGCCGAGGGCAGCCATACTGAGGGGGCGCTAGTTGGCTCAGATCAGAAACAATCCAAGATGCCGATTAAAGAGGAGAAGGAGAATGGGGGACAGAGACGCAGCCCCCGCGAGAACAAGTGGATGTCGGCGGGCGGCAGCTGCGGCGCGCGCGGACGCGAGCCGCGCGCCACGCGCCTGCGCGAGCACCGCATGAGCAACATGACCGTGTCCGTCACGCCCGCGCCGCCCTCCACGCCCGGCGCCGGCGGCCCGGGCGCCCTGGACCCGGTAACTTTACCATTCCTTCAGCCCGCGCGCCACGCGCCTGCGCGAGCACCGCATGAGCAACATGACCGTGTCCGTCACGCCCGCGCCGCCCTCCACGCCCGGCGCCGGCGGCCCGGGCGCCCTGGACCCGGTAACTTTACCATTCCTTCAGCCCGCGCGCCACGCGCCTGCGCGAGCACCGCATGA
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFTFSVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYSLHKIVKEAGGFDTCSAERKWTKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGAVDKETKIEVKGDQTPEKANTTRSRSNSKCPAATPPPPRRFKSSEPEPAAEGSHTEGALAGADEQKEVKTPIKEEKENGEQRRTVISSSECDPAAEDSYTEGALAGADEEKEVKMPIKEEKENGEQRRTVISSSECDPAAEDSYTEGALAGADEEKEVKMPIKEEKENGEQRRTVISSSECDPAAEDSYTEGALAGADEEKEVKMPIKEEKENGEQRRTVISSSECDPAADDSYTEGALAGADEEKEVKMPIKEEKENGEQRRTVISSSECDPAAEDSYTEGALAGADEEKEVKMPIKEEKENGEQRRTVISSSECDPAAEDSYTEGALAGADEEKEVKTPIKEEKENWEQSGSKFLFWSVGMIFKIASLYSRLDQPYRGGAEKERENGEQRRSSYTEGALVGADEEKEVKMPIEEEENGEQRHKGALDGAYEKKKAKTLIKEEKWGAETQESVSAAEGSHTEGALVGSDQKQSKMPIKEEKENGGQRRSPRENKWMSAGGSCGARGREPRATRLREHRMSNMTVSVTPAPPSTPGAGGPGALDPVTLPFLQPARHAPARAPHEQHDRVRHARAALHARRRRPGRPGPGNFTIPSARAPRACASTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -