Cpom032941.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- nfil3
- Assembly
- GCA_033807575.1
- Location
- CM066366.1:5058641-5059735[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-15 1.2e-11 45.7 0.7 3 62 87 146 85 149 0.92 2 2 0.0018 3.3 9.0 1.2 32 58 332 358 323 364 0.59
Sequence Information
- Coding Sequence
- ATGGTCGCTGAGTTCATCCTGAGTCAGCAGCAGCTTCTGAGCACCGCTCCGGCCCTTGGCCCCGCCCCGATGCCACTCCGCGCGCCCCCTCAAGCCCGCGGGAGACTGTCCGTCTCCCCGCACTTCCCAATGGACCAGAACTCCAACGGTCCCTCGGGAGACCCTAACAACTACCCCTCAGACTTCGATTACAAGAACCGCAAGGACTTCTTCGGACAGCGCAAGCAAAGAGAATTCATCCCTGATAACAAGAAGGATGATGGCTACTGGGACCGTCGGCGTCGCAACAACGAGGCCGCCAAGCGCTCCCGTGAAAAACGCCGCTTCAACGACATGGTTCTCGAACAACGCGTCGTCGAACTGTCCAAGGAAAACCACGTACTCAAAGCGCAGCTGGACGCCATTAAGGAGAAATACGGGATCTGCGGCGAAAACCTCATCAGCATCGATCAGGTGCTCGCAACCTTGCCAACATGTGACCAAGTTTTATGCGTGACGAAGAGGAGCAAGCTGTCGAACAGCGCGATCTTCCCCGCTCCGCCCCCACCGCCGCCTGCATCTCTGCCGCCAGCATCGCCACCTTCCCCCGTACCCCAGCGCGCTCCCGAGCCATACCAGGAGCGACTCCCCGCCCCTGAATCGTACTACCCCCACCCTGCCCACTACGAGCCGCCAGGCTCAGTCCTCAACCTCTCCaaccgccgccgcgcgccgtcTCCATACGAACTATCCTCCCTCTCCGGCTCCGGCGATGAGACCACCGAGCAGTACGCCCCCGAAAACAATTGCTTGCCACTCAAACTGCGGCACAAGAGCCACCTTGGAGACAAAGACGTCGCCAGCGCCTTGCTATCTCTCCAGCACATCAAACAAGAGCCCGGTCCCCGGTCCTCGCCATCCTGGGACGGTGAAGGTTCCAGCGACGAGCGTGACTCTGGTATTTCGTTGGGAGCGGAATACAGGCCGCAGCGTCCCGAGGACAGGCTCGGGGAAGAAGAAGATGCGCATCTCAAAGCGGAACTCGCGCGGCTCGCGACGGAGGTCGCGACGCTTAAAAACATGATGCATCAGAACAAACGCACGCTGGAGCACTGA
- Protein Sequence
- MVAEFILSQQQLLSTAPALGPAPMPLRAPPQARGRLSVSPHFPMDQNSNGPSGDPNNYPSDFDYKNRKDFFGQRKQREFIPDNKKDDGYWDRRRRNNEAAKRSREKRRFNDMVLEQRVVELSKENHVLKAQLDAIKEKYGICGENLISIDQVLATLPTCDQVLCVTKRSKLSNSAIFPAPPPPPPASLPPASPPSPVPQRAPEPYQERLPAPESYYPHPAHYEPPGSVLNLSNRRRAPSPYELSSLSGSGDETTEQYAPENNCLPLKLRHKSHLGDKDVASALLSLQHIKQEPGPRSSPSWDGEGSSDERDSGISLGAEYRPQRPEDRLGEEEDAHLKAELARLATEVATLKNMMHQNKRTLEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00970150;
- 90% Identity
- iTF_00653979;
- 80% Identity
- -