Basic Information

Insect: Cydia fagiglandana
Gene Symbol: stc
Assembly: GCA_963556715.1
Location: OY750799.1:2028212-2034102[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.1 2.6e+04 -3.6 1.6 15 19 597 601 596 601 0.81

2 5 0.021 2.6e+02 2.8 2.3 2 10 629 637 629 637 0.94

3 5 0.00014 1.8 9.7 20.3 4 19 645 660 643 660 0.93

4 5 3.2e-08 0.0004 21.4 15.8 1 18 696 713 696 714 0.99

5 5 1.3e-07 0.0016 19.4 14.0 1 18 739 756 739 757 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.1	2.6e+04	-3.6	1.6	15	19	597	601	596	601	0.81
2	5	0.021	2.6e+02	2.8	2.3	2	10	629	637	629	637	0.94
3	5	0.00014	1.8	9.7	20.3	4	19	645	660	643	660	0.93
4	5	3.2e-08	0.0004	21.4	15.8	1	18	696	713	696	714	0.99
5	5	1.3e-07	0.0016	19.4	14.0	1	18	739	756	739	757	0.98

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCTTATCCTTACAACCAAGATTACCAGGGCTCCAACACCTGGAATGGTGAATTAGGCAATCAATATTCAAATCAACAGTACtatccccccacacaacctacTTACGAGCAACCTAACCAGTATGTAAACTTTCAAGAGTTTCTCTCTCAAATGCAAGGCGGTAACGCCGCCGCGTCAAGTTCTGCCTCATACAGCAACACTCAGTATCAAAACTACCCTAGCAACCAGTATGAATACCAAAACATGCCTTCAACTTCTCAAAATCCATACTATCCAACATCAACTGCTGTTAACGGTACAGATTTCCAAACATCACATAGCCAAATGAATGTATCAGAACCTAGCTATAGCAATCAAATGGTATTCAAATCAAATCTCACAGCAACAGCAACAGAATTTGTGCCAAAGGGAACTCAGAAGCAACCAGGTCCTCCAGAAGACTCTTCCAATTACAATGAACTGTCGGAAAGTAAGGATCATACTGCTGGAAACTGGAGAGAAAAGTCTTCCCAACCAAGTAGTTCTCGTAGCTTAAATGAACCTCGGAATGATCAGGAATCAAAGAAAAGACCAGAAAAAGACCGCAGGCGGCGTAATGAAGGTCGTAACAATAATTTAAGTAGTCAAATTGAACCTAATAGTCAATACAATGAGCTTAATAGTCAAAATGATCCTGATGGTGGTGAATATGAATCAAATACTTATAGTTATGATTCTAATAAACATAGTGCCGAGTATAGCAATCGTAATAATGACGGCAGCAGTCGAAAATATGAGTCAAATAAAAGTGGCCAAAAAAATGAGTCCAGCCGTAACAATGAGAGCAGCCGAAACTATGACACCAACAGTTACAATAATGAATCAAGCAGTCGGAATAATGATTCTGACCGTAACCATGACTCTCAAGACCGTAACCACTCAAATAGGAATACAGATTCTGATGCCCGGCTCTATGAGTCTAGCAGTCGTAACAATGACGGCAACAGCCGCAACTACGACTCAAAAAAACGCTACGAATATAATAATCGTAATTATGACGCCAGCAATCGTGAGAGAGATGGCGGCAGTCGCAACTACGAATCAAATAGTCGAAATTACGATTCTAACAATCGAAGCCAAGACAGCAATCGCGGTGCTGACTCAGGGCGCTCCGACTATAACCGTCGCGACTTCAACGGCCGCGACAGTGACTACAATAGTCGTAATAACGACTACAATCAGGATCGTGAATATGGTCGTAACCAGGACTATAATAGTCGTGATTACGGCCGTGGCTACGACTCTCGTTACGACAGAGGAAATAAAAAGTCTAAAAATAAAGAAGCTGATAATAGAACATACTACAACAGTACAGCTAAGGGTAGTCAGGACGTCAGGAGTGGGAGAGCAGAGCGAGGAGAAGCCTCGGGCAGGAGTAGGAACTGGCCGGGAAGCCAGCGGGTGAGGCCGATGGAAAGAGCTGATGATGAGCAGTTTGCTAAAGGATATCTCGATAATCGGGAGGATCGGAATGCGAAAGGCTCAAGATCAGAAACCACTTTTAGTCCAAGGAACAGGAATAAGCAAATAGATCATGGTGGGAACGTAGACCTGACCCAACGGGAGCGTCTCTCCGAGCAACTAGACAAGGGAACGTTGGAATGCCTGGTGTGCTGCGAACGAGTGAAACAGATAGACCCGGTCTGGTCGTGTGGCAACTGCTACCATGTGCTGCATCTCCGCTGCATCAGAAAGTGGGCCATGAGCAGCATCATAGAGGGAAAATGGCGCTGCCCCGCCTGTCAGAACACGAGCTCGGAGCTTCCCTCCGAGTACCGCTGCATGTGCGGCGCCGTGCGGAGCCCCGACTACCAGCGCGGGCAGCATGGGGCCCACACATGCGGACAGACGTGTCAGCGGCCCCGCTCCTGCCCTCACCCGTGCACGCTGCCGTGCCACCCCGGGCCCTGCCCGCCCTGCCAGGCCACCGTCTCCAAGCAATGCGGCTGCGGCGCTGAAACCCGGTCCGTCCTCTGCAGCAGCAAGCTACCTCAAGTCTGCGGCCGAGTGTGTTCCCGCAAACTGGAGTGTGGGGTGCACTCGTGCGAGAAGGAGTGCCACGAGGGCCCGTGCGACCCTTGTGGGGCCTCCGTCGAGCAAGGTGCCAGACACAAGTTACCCCAAGTCTGCGGCCGAGTGTGTTCCCGCAAACTGGAGTGCGGGGTGCACTCGTGCGAGAAGGAGTGCCATGAGGGCCCGTGCGACGCTTGCGGGGCCTCCGTCGAGCAAGGTAGAGTAGACTTAGACCACCGATGA
Protein Sequence: MSQWNNSYPYNQDYQGSNTWNGELGNQYSNQQYYPPTQPTYEQPNQYVNFQEFLSQMQGGNAAASSSASYSNTQYQNYPSNQYEYQNMPSTSQNPYYPTSTAVNGTDFQTSHSQMNVSEPSYSNQMVFKSNLTATATEFVPKGTQKQPGPPEDSSNYNELSESKDHTAGNWREKSSQPSSSRSLNEPRNDQESKKRPEKDRRRRNEGRNNNLSSQIEPNSQYNELNSQNDPDGGEYESNTYSYDSNKHSAEYSNRNNDGSSRKYESNKSGQKNESSRNNESSRNYDTNSYNNESSSRNNDSDRNHDSQDRNHSNRNTDSDARLYESSSRNNDGNSRNYDSKKRYEYNNRNYDASNRERDGGSRNYESNSRNYDSNNRSQDSNRGADSGRSDYNRRDFNGRDSDYNSRNNDYNQDREYGRNQDYNSRDYGRGYDSRYDRGNKKSKNKEADNRTYYNSTAKGSQDVRSGRAERGEASGRSRNWPGSQRVRPMERADDEQFAKGYLDNREDRNAKGSRSETTFSPRNRNKQIDHGGNVDLTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSIIEGKWRCPACQNTSSELPSEYRCMCGAVRSPDYQRGQHGAHTCGQTCQRPRSCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLPQVCGRVCSRKLECGVHSCEKECHEGPCDPCGASVEQGARHKLPQVCGRVCSRKLECGVHSCEKECHEGPCDACGASVEQGRVDLDHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -