Cfag001397.1
Basic Information
- Insect
- Cydia fagiglandana
- Gene Symbol
- GATA-B
- Assembly
- GCA_963556715.1
- Location
- OY750790.1:23082296-23096248[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-18 2.2e-14 53.7 3.0 1 34 284 316 284 318 0.97 2 2 2.7e-18 1.1e-14 54.7 6.1 1 34 353 385 353 387 0.97
Sequence Information
- Coding Sequence
- ATGGACACAACACGGCGGCCCGCGGGCTGCGGTGCGGGCCCGCACGCTTCGACAACCAGCAGCAGAGGTGATACTGTCCTGCACAGACATCGGTACGGTACAAGGCCCCCTTGTGTTGGTGCAACGGTAGCTCCGTCACCACACGGTAATGAATGCAAACGGGTCGAGGGCGCGGGCGACGTGCGGGGAGGGGCAGGAGCGATAAGCACAGCAACACAGGGCACTTCCGAGACGTTCCGAGCCATTAGCCTCAGCGACTGCGTTCCATTTTACCTACCGCCACTTCATACCCGTAATATCTTAGCTTCAGTCAATATTACAGCTGTGATCGATAGCGAGATCACATGTACTCAGGCTGTCTGCAGAAGTGTCTGCATGGGTACTGAGCGAGTGAATGTTTGCATGTGCAGAGGCGGCGGTGGCAGCGGCGTGTACGCCCGCTGTGCGTATCCCGGCAGCGCGCCCTACTTCGGCAACGGCGCCGACCTCTCGTCGCAGCCGCAGATTTGGACCTCTAGTGCAGGCGGATCGCCGTCGTACGGCGGGTCGAGTGGCAGCGCGCCGGGCGCGGTCCTGGAGGAGTACGGCGACGGTGCCGGCTCGGGCTCCGGAGGCGCCGGCGGCTCGCCcggcagtggcggcgcgttACCCGCCTTTAACACCCGCTTCGGTGGGACGCCCTTCGCTTGTGCCACCTCGCGCCCTTCCACAGTCTACGGGACCACAGCTTTGTCTTCTAACGCCTATGTGCCCCAGgAAGTATGGTTAGAAGGCAGTCGCCGACAGTACTCTGCCGCCGCCAATCTGTCAGCAATCGAGATGGCGGAGATATTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACTTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCCCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCGTGCCCGCGCCCGCCAACGACATGGGAACGAAGAGGCCTGGCCTATCGTGCAGCAACTGCCACACGACCATGACGTCCCTGTGGCGCCGGAACGCGCACGGGGAGACCGTCTGCAACGCCTGCGGCCTCTATTACAAGCTACACAACATCAACCGCCCTATGGCCATGAAGAAAGACTCCATACAGACGAGAAAGCGAAAGCCTAAGAACAGCCTGAAAGCGGAGCGCAGCTTGAAAAATTTAACCCAACACTCGCATTCCACTGCTGTCAAAATGGAAAATCTCTTGGACGCGGGGGCAACGGCGGCGTCGACCGTGGGCGAGAGCAGTCGGGGGCTGTCACTGGGCTACTACGTGCAGCAGCAGCTGAAACGAGAGGAGCCGCCGCCGGCGCACGGCGGCGCGCTAGTGCACCACGCGCACGCGCCCGCGCTCCTCCACCACGTGCACGCGCAGCAACTCTACGAGGACGAGTTCCGACGCGCACCCGAGACCGCTGATCGCCTAGAACGCCCCACCGTCGTCTCCATCGGCAGCTGA
- Protein Sequence
- MDTTRRPAGCGAGPHASTTSSRGDTVLHRHRYGTRPPCVGATVAPSPHGNECKRVEGAGDVRGGAGAISTATQGTSETFRAISLSDCVPFYLPPLHTRNILASVNITAVIDSEITCTQAVCRSVCMGTERVNVCMCRGGGGSGVYARCAYPGSAPYFGNGADLSSQPQIWTSSAGGSPSYGGSSGSAPGAVLEEYGDGAGSGSGGAGGSPGSGGALPAFNTRFGGTPFACATSRPSTVYGTTALSSNAYVPQEVWLEGSRRQYSAAANLSAIEMAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAVPAPANDMGTKRPGLSCSNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSLKAERSLKNLTQHSHSTAVKMENLLDAGATAASTVGESSRGLSLGYYVQQQLKREEPPPAHGGALVHHAHAPALLHHVHAQQLYEDEFRRAPETADRLERPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773460;
- 90% Identity
- -
- 80% Identity
- -