Basic Information

Insect: Cydia amplana
Gene Symbol: nfxl1
Assembly: GCA_948474715.1
Location: OX419675.1:3402994-3405465[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81

2 20 0.097 8.1e+02 0.7 0.4 4 10 169 175 168 175 0.96

3 20 6.2e-07 0.0052 17.3 15.7 3 19 186 202 185 202 0.95

4 20 9.1e-06 0.076 13.5 10.5 3 19 239 255 237 255 0.91

5 20 2.4 2e+04 -3.8 1.7 5 10 279 284 279 284 0.90

6 20 1.3e-09 1.1e-05 25.9 12.2 1 19 290 308 290 308 0.99

7 20 2.4e-07 0.002 18.6 18.0 3 19 345 361 337 361 0.86

8 20 3 2.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88

9 20 8.9e-06 0.075 13.6 18.3 1 18 395 412 395 413 0.97

10 20 1.4e-08 0.00011 22.6 15.9 1 19 422 440 422 440 0.99

11 20 0.00012 0.98 10.0 5.1 9 19 488 498 486 498 0.89

12 20 0.036 3e+02 2.0 1.0 6 12 497 503 497 504 0.92

13 20 0.065 5.4e+02 1.2 5.1 3 11 509 517 508 518 0.88

14 20 0.56 4.7e+03 -1.8 3.3 14 18 547 551 547 552 0.85

15 20 0.47 3.9e+03 -1.5 0.2 8 12 568 572 567 572 0.77

16 20 0.0041 35 5.0 6.4 1 11 588 598 582 599 0.91

17 20 1.3 1.1e+04 -2.9 1.5 15 18 613 616 612 617 0.82

18 20 0.00013 1.1 9.8 13.2 1 18 628 645 628 646 0.91

19 20 1.3e-06 0.011 16.2 11.9 1 16 687 701 687 706 0.87

20 20 2.8 2.4e+04 -4.0 0.6 6 10 736 740 735 741 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3	2.5e+04	-7.8	5.6	15	19	134	138	133	138	0.81
2	20	0.097	8.1e+02	0.7	0.4	4	10	169	175	168	175	0.96
3	20	6.2e-07	0.0052	17.3	15.7	3	19	186	202	185	202	0.95
4	20	9.1e-06	0.076	13.5	10.5	3	19	239	255	237	255	0.91
5	20	2.4	2e+04	-3.8	1.7	5	10	279	284	279	284	0.90
6	20	1.3e-09	1.1e-05	25.9	12.2	1	19	290	308	290	308	0.99
7	20	2.4e-07	0.002	18.6	18.0	3	19	345	361	337	361	0.86
8	20	3	2.5e+04	-5.3	2.2	5	10	384	389	384	389	0.88
9	20	8.9e-06	0.075	13.6	18.3	1	18	395	412	395	413	0.97
10	20	1.4e-08	0.00011	22.6	15.9	1	19	422	440	422	440	0.99
11	20	0.00012	0.98	10.0	5.1	9	19	488	498	486	498	0.89
12	20	0.036	3e+02	2.0	1.0	6	12	497	503	497	504	0.92
13	20	0.065	5.4e+02	1.2	5.1	3	11	509	517	508	518	0.88
14	20	0.56	4.7e+03	-1.8	3.3	14	18	547	551	547	552	0.85
15	20	0.47	3.9e+03	-1.5	0.2	8	12	568	572	567	572	0.77
16	20	0.0041	35	5.0	6.4	1	11	588	598	582	599	0.91
17	20	1.3	1.1e+04	-2.9	1.5	15	18	613	616	612	617	0.82
18	20	0.00013	1.1	9.8	13.2	1	18	628	645	628	646	0.91
19	20	1.3e-06	0.011	16.2	11.9	1	16	687	701	687	706	0.87
20	20	2.8	2.4e+04	-4.0	0.6	6	10	736	740	735	741	0.78

Sequence Information

Coding Sequence: ATGGCCCGGCGATACCACGACGCAGCTGCGAAATTGCAGCTAAATGTCCAGAAACATTTGAAGGGGATGAAAGAGCTTTCTTCGTCGGAAGATGAGGAACCGTACGAGTCCAGCGTCCTCGAGGGCGTGCTGCAGAGCTACAGGAATGGCGGCGGCGACGCGCACATGCTCAACCGCACGAAGAACATGCTGGAGGAAGCGATTAGCGGCCGCCCCGTAACATGTCTCATTTGCATCGGCTCCATCAAACGCGCCCATCCCATCTGGACTTGCGACCACTGCCACTCGTACTTCCATCTCTCCTGCATCCAGAAGTGGTCCAACGACAGCATTAGCCTGCGTAGCGAGGAGAACCACGGACCCATCGCGGTGTTTGTGCCCAAGAAAATCGAGTGGTGCTGCCCTAAATGCCGGCAGTCGTATAGTAAAGAGGAAATTCCTCGCAAGTATCGCTGTTTCTGTAGCAAGACTGATGACCCTCCATTCCATCCATGGTTGATTCCACATTCGTGTGGAGAGGTGTGTGAAAAAAGGTTGTCAACAGGAGATAATTGCAAACATAAATGTCTGTTGATATGCCATCCTGGTCCCTGTCCACCGTGCCCACAAACTGTCAATGGAGTATGTTTCTGTGAGAAGGAACGTAAGAGAGTTCGCTGCAGTGCATCAAAATGGTCTTGTGGCCAACAGTGTAAGAAATTACTCTCATGCAAATCTCACAAATGTGAAAATGTTTGCCACGAGGATGCGTGCGCTCCTTGTACATATACAAGTGTCCAGGCCTGTCTGTGTGGTGCTGAGAAGGTCAAAAGACCATGCAATGATCCTCTATGGCGCTGCCAGAAGCGTTGTAACAAACCATTCTCATGTGGTTACCATAAATGTGAAGAAATATGTCACTCAGGTGATTGTGGTGACTGTCCCAATTCTGGGATGCGGTCATGTCCTTGTGGAGCTAATCAGAGATTTGTTCAGTGCCCTGATGTCATGGAGACCTGTAAGGGCACCTGTGGAAAGACTAAGGATTATTGTGAACACACTTGCCCAGAGAAATGCCACAAAGGCCCCTGTCCACCATGCCAAGTGTTGATTGAAAAAAAGTGTCAATGCAGCACACATGTGAGATCATTACCTTGCAGTAAGGAGTATAAGTGCGAAACCAAGTGCCGAGGCATAAGACCTTGTGGAAAACATGGTTGTGCTCGTAAATGTTGCAATGGAAACTGTCCGCCATGTGAGAAAATCTGTGACAAGCCTCTGCAGTGTGGTCGTCATAAATGCACAATGGTATGCCATCACGGTCCATGCTATCCTTGTCCCAGGGAATCCAAAGTAACTTGCCGCTGTAAAGAGACCTATGTAACAGTTCCGTGTGGTAGAGAGAAACACACTAAACCTCCTAAATGCAGTCTCCTGTGCGCGCTTAAATATAAATGTGGCCATGTCGATGAAAACAAACATTCCTGCCATTTTGGTGATTGTCCTCCTTGTAAGGCAATATGTCATAAGCAGTATGAGAATTGTGAACATGACTGCAGAGCTGTTTGCCACGCATTTGTTAGAGTAGTTTTTAAGCAAGTAGAGAAGCCCGCTACTCCATGGGAAGTGCAGCCACCAAAAACTAAAGTAATGACTCTTGAATGTCCACCATGTGAGATTCCGGTTCCTATTGTTTGCTTTGGGGAACATGAAACAGCAGATCAACCATGCCATACTGCTTTGCGCCGCCCCTGTGGTCGTGAATGTGGCAGAGAACTTCCCTGCACCAAACACAAGTGCAAACTGCTGTGCCACTTGCACACAGCCGATCCTAACTATCCTAATGTTCCTTCTTCCTGCGAACCATGCAATAGGGAATGTCTAGCCCCAAGACCAGACAGGTGCAGCCATAAATGTGCTAGAGGTGTTTGCCATCCAGGAGCCTGTCCTTCCTGTGAAGTCATAGAAAAAACTCCATGTCACTGCAAAGTTACCGAATTATACTTGCGATGCCGTGAACTGAGTACAGCTACAGAAGAAATGCTGTCATGCAAGCAGCAGTGCCCTAAGAATCTGGAGTGTGGGCACAGATGCAGAAACCTGTGCCATCCAGGCCCCTGTGCAAGTCAAGTCTGCACAAAGAAAACAAAGGTCTACTGTCCATGCGGAAACTTGAAGAAGGATGCTCCTTGTAATCTTGTAAGGAGTGGTGAAGGGAAACCTTCCTGTGACTCCACTTGTGAAGAAAAACGCATTGCAGCTGAGTTAGAAAGAGAAAAAGAAGAAAAGAGACGTAAAGAGATTGAGGAGGAGAAAAATCGCAAGGAGTTGGCGGAATATGAATGGAAGTTGAGTGGAAAGAAGAAGAAATATAAAGAAAAGAAGGTTGTAGCGAATAGGGATGACCGGAATCTGTTGCAAAAGTATTGGATTCCTATCGTTTCGGTCTTAGTTGTTGTAATTTCTGCTATTTATTTCATATTTTATATTTGA
Protein Sequence: MARRYHDAAAKLQLNVQKHLKGMKELSSSEDEEPYESSVLEGVLQSYRNGGGDAHMLNRTKNMLEEAISGRPVTCLICIGSIKRAHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRQSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCEKRLSTGDNCKHKCLLICHPGPCPPCPQTVNGVCFCEKERKRVRCSASKWSCGQQCKKLLSCKSHKCENVCHEDACAPCTYTSVQACLCGAEKVKRPCNDPLWRCQKRCNKPFSCGYHKCEEICHSGDCGDCPNSGMRSCPCGANQRFVQCPDVMETCKGTCGKTKDYCEHTCPEKCHKGPCPPCQVLIEKKCQCSTHVRSLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTMVCHHGPCYPCPRESKVTCRCKETYVTVPCGREKHTKPPKCSLLCALKYKCGHVDENKHSCHFGDCPPCKAICHKQYENCEHDCRAVCHAFVRVVFKQVEKPATPWEVQPPKTKVMTLECPPCEIPVPIVCFGEHETADQPCHTALRRPCGRECGRELPCTKHKCKLLCHLHTADPNYPNVPSSCEPCNRECLAPRPDRCSHKCARGVCHPGACPSCEVIEKTPCHCKVTELYLRCRELSTATEEMLSCKQQCPKNLECGHRCRNLCHPGPCASQVCTKKTKVYCPCGNLKKDAPCNLVRSGEGKPSCDSTCEEKRIAAELEREKEEKRRKEIEEEKNRKELAEYEWKLSGKKKKYKEKKVVANRDDRNLLQKYWIPIVSVLVVVISAIYFIFYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00023391;
90% Identity: iTF_00411076;
80% Identity: -