Camp005918.2
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- stc
- Assembly
- GCA_948474715.1
- Location
- OX419663.1:1680083-1713335[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.059 4.9e+02 1.3 2.3 2 10 639 647 639 647 0.94 2 21 0.00042 3.5 8.2 20.3 4 19 655 670 653 670 0.93 3 21 9.6e-08 0.0008 19.8 14.3 1 18 706 723 706 724 0.98 4 21 0.00059 5 7.7 10.4 1 18 765 782 765 783 0.98 5 21 3.8e-05 0.32 11.5 11.1 1 19 824 846 824 846 0.88 6 21 0.37 3.1e+03 -1.2 0.5 4 10 1064 1070 1063 1072 0.92 7 21 2.8e-05 0.24 12.0 18.0 3 19 1078 1094 1066 1094 0.87 8 21 0.37 3.1e+03 -1.2 0.5 4 10 1174 1180 1173 1182 0.92 9 21 2.8e-05 0.24 12.0 18.0 3 19 1188 1204 1176 1204 0.87 10 21 0.37 3.1e+03 -1.2 0.5 4 10 1290 1296 1289 1298 0.92 11 21 2.8e-05 0.24 12.0 18.0 3 19 1304 1320 1292 1320 0.87 12 21 0.37 3.1e+03 -1.2 0.5 4 10 1406 1412 1405 1414 0.92 13 21 2.8e-05 0.24 12.0 18.0 3 19 1420 1436 1408 1436 0.87 14 21 0.37 3.1e+03 -1.2 0.5 4 10 1474 1480 1473 1482 0.92 15 21 2.8e-05 0.24 12.0 18.0 3 19 1488 1504 1476 1504 0.87 16 21 0.37 3.1e+03 -1.2 0.5 4 10 1590 1596 1589 1598 0.92 17 21 2.8e-05 0.24 12.0 18.0 3 19 1604 1620 1592 1620 0.87 18 21 0.00041 3.4 8.2 9.4 10 18 1667 1675 1665 1676 0.92 19 21 2.2e-07 0.0018 18.7 13.6 1 17 1712 1730 1712 1736 0.84 20 21 0.00023 1.9 9.0 6.5 1 14 1742 1754 1742 1754 0.97 21 21 0.95 8e+03 -2.5 0.3 7 12 1831 1836 1831 1836 0.84
Sequence Information
- Coding Sequence
- ATGTCTCAGTGGAACAACTCTTACCCTTACAACCAGGATTACCAGGGCTCCAGCACCTGGAATGGTGAATTAGGCAATCAATATTCAAATCAACAGTACTATCCCACCACACAACCTACTTACGAGCAACCTAACCAGTATGTAAACTTTCAAGAGTTTCTCTCTCAAATGCAAGGCGGTAACGCCGCCGCGTCAAATTCTGCCTCTTACAGCAACACTGAGTATCAAAACTACCCTAGCAACCAGTATGATTACCAAAACATGCCTGCAACATCTCAAAATCACGCTCAAAATCCATACTACCCAACACCAACTGCTGTGAATGGTACAGATTTTCAAACATCACATAGCCAAATCAATGTATCAGAACCTAGCTATAGCAATGAAATGGCATTCAAATCAAATCTCACAGCAACAGCAACAGAATTTGTGCCAAAGGGAACTCAGAAGCAACCAAGTCCTCCAGAAGACTCTTCCAATTACAATGGACTGTCGGAAAGTAAGGATCACGCTGCCGGAAACTGGAGAGAAAAGTCTTCCCAACCTAGTAGTTCCCGTAGCTTTAATGAACCTCGGAATGATCAGGAATCAAAGAAAAGACCAGAAAAAGACCGCAGGCGACGTAACGAAGGTCGTAATAATAATTTAAGTAGTCAAATTGAACCTATTAGTCAATACAACGAGCTTAATAGTCAAAATGATCTTGATGGTGGTGAATATGAATCAAATACTTATAGTTATGATTCCAATAAACATAGTGCAGAGTATAGCAATCGTAATAATGAAGGCAGCAGTCAAAAATATGAGTCAAATAAAAGTGGCCGTAAAAATGAGTCTAGCCGTAAAAATGAGTCTAGCCGTAACAATGTTAGCAGCCGTAACAATGAGAGCAGCCGCAACTATGACTCCAACAGTTCCAGTAATGAACCAAGCAGTCGGACCAATGATTCTGACCGAAACCATGACTCACAAGACCGTAACCAGTCAAATAGGAATACAGATTCTGATGCCCAGCACTATGAGTCTAGCAGTCGTAACTATGATGGCAACAGCCGCAACTATGACTCTAAAAAACGCTATGAATACAGTAATCGTGAGAGAGATGGCGGCAGTCGCAACTACGAATCAAATAGCCGAAATTATGATTCTAACAATCGAAGCCAAGATAACAATCGCGGAGGTGACTCAGGCCGCTCTGACTATAACCGTCGCGATTTCAATGGTCGCGACAGTGACTACAATAGTCGTAATAACGACTACAATCAGGATCGTGAATATGGTCGTAACCAGGACTATAATAGTCGTGACTACGGCCGTGGCCACGACTCTCGTTACGACAGAGGAAATAAGAAGTCTAAAAGTAAAGAAGCTGATAATAGAACTTACTACAACAGTACAGCTAAGAGTAGTCAGGACGTCAGGAGTGGGAGAGTGGAGCGAGGAGAAGCCTCAGGCAGGAGCAGGAACTGGCCAGGAAGCCAGCGGGTGAGGCCAGCGGAAAGAGCTGACGATGAGCAGTTTGCTAAAGGATATCTGGATAATCGGGAGGATCGGTATGCTAAAGGCTCGAGATCAGATACCACTTTTAGTCCGATGAGGAACAGGAATAAGCAAATAGATCATGGTGGAAACGCAGACCTGACCCAACGGGAGCGTCTCTCAGAGCAACTAGACAAGGGAACGTTAGAATGCCTAGTTTGCTGCGAGCGAGTGAAGCAGATAGACCCGGTGTGGTCGTGCGGCAACTGCTACCATGTGCTGCATCTCCGCTGCATCAGGAAGTGGGCCATGAGCAGCATAATAGAGGGAAAATGGCGCTGCCCCGCCTGTCAGAACACGAGCTCCGAGCTTCCCTCGGAGTACCGCTGCATGTGCGGCGCCGTGCGGAGCCCCGACTACCAGCGCGGGCAGCATGGAGCCCACACCTGCGGACAGACGTGTCAGCGGCCCCGCTCCTGCCCCCACCCGTGCACGCTGCCGTGCCACCCCGGCCCCTGCCCGCCCTGCCAAGCCACCGTCTCCAAGCAATGCGGCTGCGGCGCTGAAACCCGCTCCGTCCTCTGCAGCAGCAAGCTACCACAAGTCTGCGGCCGAGTGTGCTCCCGCAAGCTGGAGTGTGGCGTGCACACGTGCGAGAGGCAGTGCCACGAGGGCCCGTGCGACGCTTGCGGGGCCTCTGTCGACCAAGTGTGCCACTGCCCGGCCGCTGCGACCCGCTCCGTCCCGTGCTGCGCGGCGACCGGCGCGTCCTCGACGTGGTCGTGCGGCGCGGCGTGCTCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGCCGCGCGTGCGCGCTGCTGCCCGCCGCCGTGCTACAGTGCCCCTGCGGCAGGACCAAGCTACCCAAAGACAAGCGCAAGTCGTGCACGGACCCGATACCATTGTGCGGGAATATCTGCGCCAAGCCGCTCCCGTGCGGCCCGGAGGGCGACAGACACTTCTGCAAACTCGAGTGTCACGAAGGTGCCTGCCCCGTGTGTCCGGACAAGACCCTGCTGCCGTGCCGCTGCGGCCACTCCAGCCGGGAGGTGCCTTGCTCCGAGCTCCCGGAGATGCTGGACAACGTGTTATGTCAGAAAAAGTGTAACAAGGTGAGGAAATACAGCCTCGATAATCCGTACTACACAGGTGCCTGCCCCGTGTATCCGGACAAGACCCTGCTGCCGTGCCGCTGCGGCCACTCCAGCCGCGAGGTGCCTTGCTCCGAGCTCCCAGAGATGCTGGACATCTTATGTCAGAAAAAGTGTAACAAGCAGAGAATATGTACGTGGTCGAGGTCACCAAAACTACAGAGGGTCACCCAACCAATACCGTGGCTCGCGGCCACCGCTGACGCAAGGTCAAGCTCCGGGTCGCACAGCGCGACCCTACACCGGGGCTGGCGCTGCCGGTCCAAGCAGAGGTGCCTACTTGCCGAATTACCGGGGAAATCAAGAAACTGTCCTGCGGCCGTCACCGCTGTCGCGACTGCTGTTGTGCCGCCACCACACATCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAACTACACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCATTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCACTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCACTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAATGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGGGTCTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGGGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGTTGTGCCGCCACCACACACCGGTGCGGGGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCACTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGCGCCAGTGAGTACTGTCTCCACACACTACTGCTGCTGTGCCGCCACCACACACCGGTGCGGCGTCGTGTGCGGCCGCACGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCCCGCCCTGTACCCGTGCCAGTTTCGAGGAGCTGAGCTGCGAGTGCGGCGCCGAGGTGCTGCTGCCGCCGGTGCCGTGCGGCGCGCGCCGCCCCGCCTGCCGCGCGCCGTGCCGCCGCCCCCGCGCCTGCGCGCACCCCGCGCTGCACGCCTGCCACTCCGGCCCCTGCCCGCCCTGCGTCGTGCTCACGGCCAAGCGCTGCCACGGACAACACGAGGAACGCAAGACGATCCCGTGTTCACAAGAAGAGTTCTCGTGCGGGCTGGCGTGCGGCAGACCGCTGCCGTGCGGCAAGCACACCTGCCTGAAGACGTGCCACAAAGGCCCGTGCGACGTCGGCAAATGCACTCAACCATGCAACGAGAAACGTCCAAGCTGCGGCCACCCGTGCGCCGCGCCATGCCACTCCGGCGACAGCGACAAAGCCGACAAGGGTGACAAGGGCGACAAACCCGACAAGCCGGCTTGTCCGAGCAGCGCGCCGTGCCGCAAGCTGGTTGCGTTCGCAACAAGTTATTATGACGACAAAGCTGACAAGCCTGACAAGGACAAGGGCGACAAAGCCGACAAGCCGGCTTGTCCGAGCAGCGCGCCGTGCCGCAAGCTGGTGCGAGCTACATGCCCGTGCGGGAGACGCGCTGCCGAACGAACGTGTCATGAAAACGCTCGAGATCTTGCTAAAATAATGAGTGCGCTGGCCGCGTCGAAAATGCAAGATGGGGGTTCAATGGATTTGTCAGAAGTTCAGCGGCCCACCGCCATGCTCAAAACATTGGAATGCGACGACGAGTGCCGCGTGGAGGCCCGCACTCGGCGCCTCGCGCTCGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGAGCACGTGCGCGCGCTCGCCGCCCGGGAGCCCGCCTTCGCGAGACACGTGCACGACAAGCTCACCGAGCTGGTGCAACTCGCCAAGAAGTCGAAACAGAAGACACGCGCCCACTCGTTCCCGTCGTGCAACTGGCAGAAACGTCAGTTCATACACGAGATGTGCGAGCAGTTCGGCTGCGAGTCTGTCGCGTACGACGCCGAGCCCAATCGCAACGTCGTCGCCACCGCCGACAAGGAGAAGTCGTGGCTGCCAGCTATGAGTGTGATAGAAGTGCTAGCTCGAGAGAACGGCAAACGGCGCGTGCCTGGGCCCATGCTGCGAGCGCCGGCCGCGCCCGCTCCGGCGGCCGCCAGCGCAAGCAATAAGTCGGGCAGCGGCTGGGCGACACTAACATCGACCAACGCGTGGGCGGCGCGCGCGCAGAAGGCCGAACAACAACAGACCAAACCCAAGATAGACTACTTCGACAACCCGCCCGACAACTAG
- Protein Sequence
- MSQWNNSYPYNQDYQGSSTWNGELGNQYSNQQYYPTTQPTYEQPNQYVNFQEFLSQMQGGNAAASNSASYSNTEYQNYPSNQYDYQNMPATSQNHAQNPYYPTPTAVNGTDFQTSHSQINVSEPSYSNEMAFKSNLTATATEFVPKGTQKQPSPPEDSSNYNGLSESKDHAAGNWREKSSQPSSSRSFNEPRNDQESKKRPEKDRRRRNEGRNNNLSSQIEPISQYNELNSQNDLDGGEYESNTYSYDSNKHSAEYSNRNNEGSSQKYESNKSGRKNESSRKNESSRNNVSSRNNESSRNYDSNSSSNEPSSRTNDSDRNHDSQDRNQSNRNTDSDAQHYESSSRNYDGNSRNYDSKKRYEYSNRERDGGSRNYESNSRNYDSNNRSQDNNRGGDSGRSDYNRRDFNGRDSDYNSRNNDYNQDREYGRNQDYNSRDYGRGHDSRYDRGNKKSKSKEADNRTYYNSTAKSSQDVRSGRVERGEASGRSRNWPGSQRVRPAERADDEQFAKGYLDNREDRYAKGSRSDTTFSPMRNRNKQIDHGGNADLTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSIIEGKWRCPACQNTSSELPSEYRCMCGAVRSPDYQRGQHGAHTCGQTCQRPRSCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLPQVCGRVCSRKLECGVHTCERQCHEGPCDACGASVDQVCHCPAAATRSVPCCAATGASSTWSCGAACSRVLACGAHVCRAPCHAPPCRACALLPAAVLQCPCGRTKLPKDKRKSCTDPIPLCGNICAKPLPCGPEGDRHFCKLECHEGACPVCPDKTLLPCRCGHSSREVPCSELPEMLDNVLCQKKCNKVRKYSLDNPYYTGACPVYPDKTLLPCRCGHSSREVPCSELPEMLDILCQKKCNKQRICTWSRSPKLQRVTQPIPWLAATADARSSSGSHSATLHRGWRCRSKQRCLLAELPGKSRNCPAAVTAVATAVVPPPHIGAASCAAARWPASCTAASSSATPATARPVPAPVSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRASEYCLHTLLLLCRHHTPVRRRVRPHAGLPAAPLRAVLPHRPLPALYPRHSATPATARPVPAPVSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRASEYCLHTLLLLCRHHTPVRRRVRPHAGLPAAPLRAVLPHRPLPALYPRHCTAASSSATPATARPVPAPVSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRASEYCLHTLLLLCRHHTPVRRRVRPHAGLPAAPLRAVLPHRPLPALYPRHCTAASSSATPATARPVPAPVSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRANEYCLHTLLLLCRHHTPVRGLSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRASEYCLHTLLLLCRHHTPVRGRVRPHAGLPAAPLRAVLPHRPLPALYPRHCTAASSSATPATARPVPAPVSTVSTHYCCCAATTHRCGVVCGRTLACQLHRCEQFCHTGHCPPCTRASFEELSCECGAEVLLPPVPCGARRPACRAPCRRPRACAHPALHACHSGPCPPCVVLTAKRCHGQHEERKTIPCSQEEFSCGLACGRPLPCGKHTCLKTCHKGPCDVGKCTQPCNEKRPSCGHPCAAPCHSGDSDKADKGDKGDKPDKPACPSSAPCRKLVAFATSYYDDKADKPDKDKGDKADKPACPSSAPCRKLVRATCPCGRRAAERTCHENARDLAKIMSALAASKMQDGGSMDLSEVQRPTAMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLQPRYSEHVRALAAREPAFARHVHDKLTELVQLAKKSKQKTRAHSFPSCNWQKRQFIHEMCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVIEVLARENGKRRVPGPMLRAPAAPAPAAASASNKSGSGWATLTSTNAWAARAQKAEQQQTKPKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -