Camp004557.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- -
- Assembly
- GCA_948474715.1
- Location
- OX419666.1:7974890-7985398[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.044 1.1e+02 3.0 0.1 21 30 168 177 162 180 0.80 2 7 0.26 6.6e+02 0.5 0.0 23 28 285 290 278 296 0.66 3 7 1 2.5e+03 -1.4 0.1 14 27 305 317 304 319 0.81 4 7 0.018 46 4.2 0.0 17 32 377 392 373 396 0.83 5 7 0.018 46 4.2 0.0 17 32 416 431 412 435 0.83 6 7 0.018 46 4.2 0.0 17 32 466 481 462 485 0.83 7 7 0.018 46 4.2 0.0 17 32 505 520 501 524 0.83
Sequence Information
- Coding Sequence
- ATGGATGGTGAAGCTGAAGATTTCAATCTCCACTGGGAGGAGGATGAGGTGGAGTCAAAGCACATCCCTGGTGTAGTGGCTTCTGAGGTCATCTGTGGCTTAGATAATGTGCAAGCTGGTTCTTACTCCAATATGAGCTCAGAAGTAATAATACAAGACACAGATCAGATAGCAGCAGAGAATCTGATGTTCTTGTCACAGGATGTAGTCAGTTACACGGATGCTGCAGAGTTGGCCGTGGACCCCAGTGTGGAGTGTGTTACGGAGGAGGTGATCACGGATGACTGGACTGAGGGGCAGGACAGAGTGGAGGTTCCATTGGAGCATTTTACAAACCCGGTGTTGGACATAAAAGAGGAAAATGACATTGATGTCCCGCTTCCAACAGATCAGGACCAGTACACAGCAATGCGACCATGGCCGTGTGACTTCTGCTCGCGGCGGTTCCGCAAGAAGGCCGCCCTGATGAACCACATGGTGGCCCACCAGAACGACCGCCCCCACGCCTGCAACCTGTGCGGCGTGCGGTACGTGCGCAAGTGCGACCTGATGAACCACCTCAAGGTGCACGCCATGGTGCCCGACAACGCGGACCCGGTCGACTACGAGGACGTGTTAGATAACAGTCAAGCGATAAAACCAAAGAAAAAGCGAGGGAGGCGAAAAAAGATTCCCGAGCCAGAGCCTGAAGAAAACGGAGACGTATGGGAGAACATGACGTCAGCGCGCACCATGCAGTGGTCGCGCCGCGGGCGCTCGCCGGCGCGACCGCCGCCGCCGCTGCCCGCGCCCTCGCCGCCCTCCGAGCCCGAGCCCTGCCCGCCGCCGGCCGACCCCAGCCGACCCTTCGTCTGCAGGCATTGCGGGGTCGGCTTCGCGAGGGAGAAGGCGCTACAGTCACACGCGAGGATACACGGGGGAGATTCGCCGATAGAGTGCGGCACGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCCACGCACTCGCGCCAGCGGCACCCGCACCAGCCGCCGCAGCAGCCGACCAGGGAGCCCTATGACTCCAACTCGGGTGACGACGACATGGAATACCAGCTGTCGCCGCTAGCCGACAGCGGGAGCGAGCGAGCCGTGTACGACACGCAGCGAGGCCCCGAACTGTTCTGTCAGGATTGCGGCGTCGCCTTCCAGCGGGCCGACCTGCTGCGTCGGCATCAGACCGCTGCACACAGAGGGAGCGAGCGAGCCGTGTACGACACGCAGCGAGGCCCCGAACTGTTCTGTCAGGATTGCGGCGTCGCCTTCCAGCGGGCCGACCTGCTGCGTCGGCATCAGACCGCTGCACACAGGAGTAAATACCAGCTGTCGCCGCTAGCCGACAGAGGGAGCGAGCGAGCCGTGTACGACACGCAGCGAGGCCCCGAACTGTTCTGTCAGGATTGCGGCGTCGCCTTCCAGCGGGCCGACCTGCTGCGTCGGCATCAGACCGCTGCACACAGAGGGAGCGAGCGAGCCGTGTACGACACGCAGCGAGGCCCCGAACTGTTCTGTCAGGATTGCGGCGTCGCCTTCCAGCGGGCCGACCTGCTGCGTCGGCATCAGACCGCTGCACACAGGTAA
- Protein Sequence
- MDGEAEDFNLHWEEDEVESKHIPGVVASEVICGLDNVQAGSYSNMSSEVIIQDTDQIAAENLMFLSQDVVSYTDAAELAVDPSVECVTEEVITDDWTEGQDRVEVPLEHFTNPVLDIKEENDIDVPLPTDQDQYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAMVPDNADPVDYEDVLDNSQAIKPKKKRGRRKKIPEPEPEENGDVWENMTSARTMQWSRRGRSPARPPPPLPAPSPPSEPEPCPPPADPSRPFVCRHCGVGFAREKALQSHARIHGGDSPIECGTCGELCWSREALATHSRQRHPHQPPQQPTREPYDSNSGDDDMEYQLSPLADSGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQTAAHRGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQTAAHRSKYQLSPLADRGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQTAAHRGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQTAAHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01073052;
- 90% Identity
- iTF_00409608;
- 80% Identity
- iTF_00409608;