Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0099 25 5.0 0.0 16 33 18 34 15 37 0.78

2 7 0.0099 25 5.0 0.0 16 33 62 78 59 81 0.78

3 7 0.0099 25 5.0 0.0 16 33 106 122 103 125 0.78

4 7 0.0099 25 5.0 0.0 16 33 150 166 147 169 0.78

5 7 0.0099 25 5.0 0.0 16 33 194 210 191 213 0.78

6 7 0.014 34 4.6 0.0 16 32 238 253 235 255 0.77

7 7 0.014 34 4.6 0.0 16 32 282 297 279 299 0.77

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0099	25	5.0	16	33	18	34	15	37	0.78
2	7	0.0099	25	5.0	16	33	62	78	59	81	0.78
3	7	0.0099	25	5.0	16	33	106	122	103	125	0.78
4	7	0.0099	25	5.0	16	33	150	166	147	169	0.78
5	7	0.0099	25	5.0	16	33	194	210	191	213	0.78
6	7	0.014	34	4.6	16	32	238	253	235	255	0.77
7	7	0.014	34	4.6	16	32	282	297	279	299	0.77

Coding Sequence: ATGGCGTTTACGCTGAAGCATCATTTGGTTACGCATTCTAGGTACCACGCAGGCGAGCGGCCCTATGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCACACATTCATTCATTCATTCATTCACACATTCAATCCCGCTGAAGCGCCACCTCGTCACGCACAGCAAGTACCACGCAGGCGAGCGGCCCTACGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCACACATTCATTCATTCATTCATTCACACATTCGTTCCCGCTGAAGCGCCACCTCGTCACGCACAGCAAGTACCACGCCGGCGAGCGGCCCTACGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCACACATTCATTCATTTATTCATTCACACATTCATTCCCGCTGAAGCGCCACCTCGTCACGCACAGCAAGTACCACGCCGGCGAGCGGCCCTACGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCACACATTCATTCATTCATTCATTCACACATTCATTCCCGCTGAAGCGCCACCTCGTCACGCACAGCAAGTACCACGCCGGCGAGCGGCCCTACGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCACACATTCATTCATTCATTCATTCACACATTCATTCCCGCTGGAGCGCCACCTCGTCACGCACAGCAAGTACCACGCAGGCGAGCGGCCCTATGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCGCACATTCATTCATTCATTCATTCACACATTCGTTCCCGCTGAAGCGCCACCTCGTCACGCACAGCAAGTACCACGCCGGCGAGCGGCCCTACGTCTGCAGCGACTGCGGCGAGAGCTTCGCGCAGAAGGTCGCACATTCATTCACACTTTAA
Protein Sequence: MAFTLKHHLVTHSRYHAGERPYVCSDCGESFAQKVTHSFIHSFTHSIPLKRHLVTHSKYHAGERPYVCSDCGESFAQKVTHSFIHSFTHSFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKVTHSFIYSFTHSFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKVTHSFIHSFTHSFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKVTHSFIHSFTHSFPLERHLVTHSKYHAGERPYVCSDCGESFAQKVAHSFIHSFTHSFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKVAHSFTL

Sequence clustering based on sequence similarity using MMseqs2