Camp018896.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- pnr
- Assembly
- GCA_948474715.1
- Location
- OX419654.1:18546060-18559547[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 3.3e-13 49.5 3.3 1 35 466 499 466 500 0.97 2 2 9.3e-18 2.3e-14 53.1 7.5 1 35 527 560 527 561 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGGAAACGAATACAACGGCGGGCGACGGCGAAAATCAACAGGAATTGCAAGCTACTGCCGAGGCACTACAACTTGTAAAACATGAAGAGAGGATCGAACAAGATCAATCTACAAACAAGAGTACGAGCTCTCCGGCTGATACGGCTGCCGACCCACAGCAGTCCCCGCATCCGCAGTCGCAGTCAGTAATAACATCTCGTCGTGCCGTACGTACTATCACTGCCGCCGGGCACATCACCACCGATGACGTTGATGTCAATCCTGAAGATGGCGTGAAGGACGAACCCCCTGAACCACCGCCGGCAGAACATGAACAGCATTCCATGCACCAATATACACCAAAACTGGAAGAAAGTGAGGCACGGAATGTCGCACAGCAACATTACGATGAAGAAAGGCTACGTTTAGCCGAAGCAGAAACAGCTCGATATCTAGCTTTCAAACCGGAATCTTATAGATCACTACCATCCCCCGATAAACGCATGCAGGTACAATATTCCCGTGCTCCACAGCGACCCACATACGGCAGGGGACTATCTTTGCGTTACGGTGCTTCGCATCATGTTATAGTCGCGCAGGAAAACAATGCAGAAGATCACGATCCGGATGCTTTCCTAGGACCCAAAGACAAACCGGAACAATTACAATACGCCCAAAATGATGACATCGGCGCACCCGGTACGAGTGATGGCAGGCAATATGGAGCAGTTCTGAGTGATCAAGTGTCGGCGTCGACATCTCTCGAAATGATTCAGACGACTTCTTTGAACAGTCAACAGTCAATCGGTGTTGCGTACCAACAAGTTAAATATGAGACCAGAGGAGAACCTGAATTACGACCTACGACATATGCCAGTCTGCAGCCAGTAACTTCTGTACACGGAGGTTATGCATATGCGGGACAGAGCCCTCAGTATGGCGGAGCCGGAGGGTACGGAGCGTACGGTGGCGGAGGCAAGGAGCTGCTTACGCTCTACGGTGCGGCGGGCGCTGCGGGTTCCGGGACGAGAGGAGACGAGTCCCCGCCCGGCCAACTCCTCTACCGGAGCGATCCTACACTATCATCATCATCCCTGACCACGCGCGGAACGCATGTCGTGTACGGATCGGTTGTACCGCAATCGCAAACAGTTTACGAAGCCCCAGCTAGTCCAAACTCACAACAGGTAACATTATATACACATGGTAATGCTGTACAATACAAAGTCGCCGGCGAGCACTACCTGGGTCAGGGAGGTGGCGTGGAGTACGTGCCCGTGTCAGGATACGACGGTGGCCTGCTGGTGGAGGGCTACGCGGCGCCGGCGCAGCCGTGGCCTGCACATAATATGCTACCAATTGACGATGGTTTTGATGCCAGCATGGCTGGGATGGGAGAAGTAAAAGAATGCGTGAACTGCGCAGCGGCAACCACCCCCCTGTGGCGACGCGACGGCACGGGGCACTACCTGTGCAACGCCTGCGGCCTCTACACGCGCATCAATGGTGTTAATAGGCCACCTCTTAAAGGACAGAAAGCAAAACCTCAACAGGCACTGCCAACGAACGGCAACCGACGCGTAGGAGTGACGTGTGCTAACTGCCGCACGTCCAACACCACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCTTGCGGACTCTACTACAAGCTGCACAACGTGAACCGGCCGCTAAGTATGAAGAAGGACGGCATCCAAACGCGCAAGCGCAAGCCGAAGAGTATGGGCGGCGCGCACGGCGTGCCGCGGCCCGGCTCCGGCGCGCTCCCTGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGGCGCAGGCGGCGCGGGGCTGCTGCTGCTCCCGCCGGCGCGCCATCACCCCGACATGATACCACCGCTAGACCGGACAGCAGTGACAGTGTCGCCGGCGTATTACCGCCCGCCCTAA
- Protein Sequence
- MESETNTTAGDGENQQELQATAEALQLVKHEERIEQDQSTNKSTSSPADTAADPQQSPHPQSQSVITSRRAVRTITAAGHITTDDVDVNPEDGVKDEPPEPPPAEHEQHSMHQYTPKLEESEARNVAQQHYDEERLRLAEAETARYLAFKPESYRSLPSPDKRMQVQYSRAPQRPTYGRGLSLRYGASHHVIVAQENNAEDHDPDAFLGPKDKPEQLQYAQNDDIGAPGTSDGRQYGAVLSDQVSASTSLEMIQTTSLNSQQSIGVAYQQVKYETRGEPELRPTTYASLQPVTSVHGGYAYAGQSPQYGGAGGYGAYGGGGKELLTLYGAAGAAGSGTRGDESPPGQLLYRSDPTLSSSSLTTRGTHVVYGSVVPQSQTVYEAPASPNSQQVTLYTHGNAVQYKVAGEHYLGQGGGVEYVPVSGYDGGLLVEGYAAPAQPWPAHNMLPIDDGFDASMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGAHGVPRPGSGALPVEAHSHKVLPPLYAAVEGAGGAGLLLLPPARHHPDMIPPLDRTAVTVSPAYYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290334;
- 90% Identity
- iTF_00411059; iTF_00412180; iTF_01134446; iTF_00872022;
- 80% Identity
- -