Camp018894.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- GATA-B
- Assembly
- GCA_948474715.1
- Location
- OX419654.1:18509973-18521967[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5e-18 1.1e-14 54.1 3.0 1 34 186 218 186 220 0.97 2 3 7.7e-18 1.9e-14 53.4 6.3 1 34 255 287 255 289 0.97 3 3 1.8 4.6e+03 -2.2 0.0 13 22 397 406 395 406 0.83
Sequence Information
- Coding Sequence
- ATGAGATCTGGAGAAGTCCCGCAGCATGCACTGAGTCGTGTGTTGAGGTCCAGTGGCCACAACACGGCGGCCCGCGGCCTGCCGTGCGGGCGCGTACGCTTCGACAACCAGCGGGGAGGCGGAGGTGGCAGCGGCGTGTACGCCCGCTGCGCGTACCCCGGCAGCGCGCCCTACTTCGGCAACGGCGCCGACCTGTCGTCGCAGCCGCAGATTTGGACCTCTAGTGCAGGCGGGTCTCCGTCGTACGGCGGGTCCAGCGGCAGCGCGCCGGGCGCGGTTCTGGAGGACTACGGCGACGGCGCCGGCTCGGGCTCCGGAGGCGCCGGCGGCTCGCCCGGCAGTGGCGGCGCGTTGCCCGCCTTTAACACCCGCTTCGGTGGAACACCCTTCGCTTGTGCCACCTCGCGCCCTTCCACAGTCTACGGGACCACAGCTTTGTCTTCTAACGCCTATGTGCCTCAGGAAGTATGGTTAGAAGGCAGTCGCCGTCAGTACTCTGCCGCCGCCAATCTGTCAGCAATCGAAATGGCGGAGATTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACTTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCCCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCGTGCCCGCGCCCGCTAACGACATGGGAACGAAGAGGCCTGGCCTGTCGTGCAGCAACTGCCGCACGACCATGACGTCCCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGCCTCTATTACAAGCTACACAACATCAACCGTCCTATGGCTATGAAGAAAGACTCCATACAGACGAGAAAGCGGAAGCCTAAGAACAGCCTGAAAGCGGAGCGCAGCTTGAAAAACTTAACCCAACACTCGCATTCAACTGCGGTCAAAATGGAAAATCTCTTGGACGCGGGGGCAACGGTGGCGTCGTCCGTGGGCGAGAGCAGTCGAGGGCTGTCCCTGGGCTACTACGTGCAGCAGCAGCTGAAGCGGGAGGAGCCGCCGCCGGCGCACGGCGGCGCGCTGGCGCACCACGCGCACGCGCCCACGCTGCTGCACCACGTGCACGCGCAGCACTACGAGGACGAGTTCCGACGCGCGCCCGACGGAGCCGATCGCCTAGAACGACCCACCGTCGTCTCCATCGGCAGCTGA
- Protein Sequence
- MRSGEVPQHALSRVLRSSGHNTAARGLPCGRVRFDNQRGGGGGSGVYARCAYPGSAPYFGNGADLSSQPQIWTSSAGGSPSYGGSSGSAPGAVLEDYGDGAGSGSGGAGGSPGSGGALPAFNTRFGGTPFACATSRPSTVYGTTALSSNAYVPQEVWLEGSRRQYSAAANLSAIEMAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAVPAPANDMGTKRPGLSCSNCRTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSLKAERSLKNLTQHSHSTAVKMENLLDAGATVASSVGESSRGLSLGYYVQQQLKREEPPPAHGGALAHHAHAPTLLHHVHAQHYEDEFRRAPDGADRLERPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773460;
- 90% Identity
- -
- 80% Identity
- -