Camp002781.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- Zfy1
- Assembly
- GCA_948474715.1
- Location
- OX419665.1:16659863-16664706[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.012 0.66 11.0 1.3 1 23 632 655 632 655 0.95 2 11 0.035 1.9 9.6 2.2 1 23 661 683 661 683 0.96 3 11 0.00014 0.0077 17.1 0.4 2 23 689 710 688 710 0.97 4 11 0.17 9.2 7.4 0.8 1 23 716 738 716 738 0.97 5 11 0.0017 0.092 13.7 0.5 2 23 745 767 744 767 0.92 6 11 0.0042 0.23 12.5 0.3 1 23 773 795 773 795 0.98 7 11 0.22 12 7.1 0.4 1 23 800 822 800 822 0.88 8 11 2.9e-06 0.00015 22.4 2.0 1 23 836 858 836 858 0.99 9 11 2.7e-05 0.0015 19.4 0.2 1 23 864 886 864 886 0.97 10 11 6e-05 0.0032 18.3 0.6 1 23 890 912 890 912 0.97 11 11 6e-05 0.0032 18.3 2.3 1 23 918 941 918 941 0.97
Sequence Information
- Coding Sequence
- ATGAAAACGCGAGCTAAAACACGTTTAGGTGCTAACACAGTGAAAGGGGATGATAAACCAGCGCCGAAGGCGAAGACTACAAAGCCGAAGGGGTCGCGGCTGCACCTTCTACTGCAACCTGAAGAGGAGCCTTTGATAGTCTCTAAGGTAATTAGACAGTATACCAGAAAGAAAAAAGTGGAATCTGCTGATTCGGTAAATAAACTTGCTGGTACAAACAGTATAAATGTTGCTGCCGCATTATCACATCAAAATAATTCCATATTATTATTCAATAATCATGTTAAAATTAAACAAGAAATCATGGAGAGTTTTCATGACATTGAAATCATGGATGTTGATGTTGAAATAGAAAATCATATTAAAACAGAAAAAAAGTCTGAATCACAGAATAAAGTTGGAGCAGGGGAGAATTATGTTATAATTAAAGAAGAAAATATAGTTCCCAATGCAAGTTATAATTCAGACCAAAATTGTGAATATGGTAAAACAAATAATCACGTGGAAATTAAAGAAAATGTAGCTGGACACAAAGGCACTTTAACTGACAATAATTTACACCAAATTAATACAAACAAAAAAAGAGACACTGTTCAAATTAAAGAAGAAAGTATAGATACTCTCTTAGATGAAAGTGTCATGAATAATGATGCCTCCATGAATTCCAATCTAAGTGAAATCATGCTAGAAACTCCAAAAATCACTATTAAAATAGAACCAGAGGATGATTCACAATATATGAACTCAGAACAGAAACATATAGACGGGTTTCCCAGAGATTGTGCGCAATCTGAAGAGGACATAGCTGTGGAAGTAAAGCCAAAGGTTGAAAAAATAAATTGCAATAATGTAAATGGCAAAATGGACTCAAGGTATAGTGAAAATGAGGATGTGGAGGGCCAGAACTATGAAGAACTTGCTCCCATCCTTAAACTGCAGCAGACATTGAATGTTGCGAATGTTCAAGCTCCACAAAAAAAAATACTGATCACGGAAGAAATTCATATTAAAGAAGAGGCAATTAGTGACACTGAGGATTGTGTTGAGGTAAAAGATAAGACTTCAGTAACTACTAGCAGCATTCAAGTAAAAGATAAGACTCCAGTAACTACTAGCAGCATTAAAGTAAAACATAACACTCCAGTAACTACTAGCAGCATTCAAGTAAAAGATAAGACTCCAAAAACTGCTGGCAGCAATGAATTAAAAGATAAGACTCCAGTAACTACTAGCAGCATTAATGTAAAACATAAGGCTCCAGTAACTACTAGGAGCATTGAAGTAAGACATAACACTCCTATAACTGCTAGCAGCATTCAAGTAAAAGATAAGACTCCTATAACTGCTAGCAGCATTGAATTAAAAGATAAGACTCCAATAACTACTAGCAGCATTGAATTAAAAGATAAGACTGCAGTAACTTCTAGCAGCATTCAAGCAAATGATAAGACTTCAATAAGTGCTAGCAGCATTGATTTAAAAGATAAGACTCCAGTAACTACTAGCAGCATTGAAGTAAAACATAAGACTCCAGTAACTACTAGCAGCATGGAATTAAAATATAAGACTCCAGTAGCTACTAGCAGCATTGAAGTAAAACATAAGACTCCAGTAACTACTAGCAGCATTGAAGTAAAAGATAAGACTCCAGAAGCTACTAGCAGCATTGAAGTAAAAGATAATTCTCCTGTGGTAATAAAGAAAAACCCTCTACCGGAAAATATAAAAATAAGAAGAATTATGAATATGCCTAAAATTCTGAAAACATATGGGAGGAAACAACCAGATCCAGTTGCAATGAAGAAATGTTTTCTTCTTGCTGTTAGCACTCCACCAGCAAAGATCCTGAAAATCGTCTCCCAGAAACTGCCGAAGATCAAATCCAATCCAAAATTTATTTGTGACATGTGCCGAAGTAACTTCAGGAGCAAGGTCAGCATGAGCGCCCACATGCGGTTCACGCACGGCGTGGTCATGAAGCACTCGTGCGAGGTGTGCTCCGCTAGCTTCCCGCACCACTACCTCATGCTCGCGCACTGGCGCGCGCACGCCGGCCCGCCTCTTGTGTGCGACCTGTGCCCCAAGTCCTTCCGGTCCAAAGACAAATACGGAGAACATTTGAATACCCACCTCCGCGAGCGACTCTACCCTTGCCCCGTGTGTCTCCAACGATACCCGGTGCTATTGCATTTACACAGGCACGCCGAAAAGCATACGCAGGAAGATACCCTCTCTTGCAATATTTGTAAGGAGAGCTACCGCTCTCTTATTGATTTGAGGCGGCATTCTGAACGCGATCATGGGGAAAAAGAAGAATTCCCATGCTATGTTTGCAGTCGGATTCTTTCATCTAGTGCTGACTTTCTTACTCATGTGAGAACGCATGATAACGCGCTCCATGCGTGCGCTTTCTGTCCCAGAAAATTCACCGACGCGCAAAAATGGGAGGAGCACTCCGCTGAACATATTGAGAAGATAGGTAGAGGAGAGTCCGTCGAAAAACCCTATAGCTGCGAATACTGTAAAAAATCCTTTGAATACCAAAGCGTACTGAAAACACATATTAGAATGCATACTGGGGAACGACCATATGAGTGTCCGGAGTGTAAAAAAAAGTTGAAGACGCAAAGTGCATTAACGGAGCATGTTAACGGGCATAAACGGCCTTATCCATGTCCAGAGTGTAAGCAACGGTTTGGTAAGCGGAACTCTCTGTCGAGGCACATGTTGCTACACACCGGGGAGCGTCCGCACAGCTGTACGGGTTGCCCGATGACTTTCGTGCAACGTTCGTCGATGCTGCAGCACATGCGGCGGTTTCACGAGCCCGGACTCAAGCGGGCACCGAAAAGTAAGAAAGGTGCGAAAAAAACGAATAAAAAGAATGATTGCTGA
- Protein Sequence
- MKTRAKTRLGANTVKGDDKPAPKAKTTKPKGSRLHLLLQPEEEPLIVSKVIRQYTRKKKVESADSVNKLAGTNSINVAAALSHQNNSILLFNNHVKIKQEIMESFHDIEIMDVDVEIENHIKTEKKSESQNKVGAGENYVIIKEENIVPNASYNSDQNCEYGKTNNHVEIKENVAGHKGTLTDNNLHQINTNKKRDTVQIKEESIDTLLDESVMNNDASMNSNLSEIMLETPKITIKIEPEDDSQYMNSEQKHIDGFPRDCAQSEEDIAVEVKPKVEKINCNNVNGKMDSRYSENEDVEGQNYEELAPILKLQQTLNVANVQAPQKKILITEEIHIKEEAISDTEDCVEVKDKTSVTTSSIQVKDKTPVTTSSIKVKHNTPVTTSSIQVKDKTPKTAGSNELKDKTPVTTSSINVKHKAPVTTRSIEVRHNTPITASSIQVKDKTPITASSIELKDKTPITTSSIELKDKTAVTSSSIQANDKTSISASSIDLKDKTPVTTSSIEVKHKTPVTTSSMELKYKTPVATSSIEVKHKTPVTTSSIEVKDKTPEATSSIEVKDNSPVVIKKNPLPENIKIRRIMNMPKILKTYGRKQPDPVAMKKCFLLAVSTPPAKILKIVSQKLPKIKSNPKFICDMCRSNFRSKVSMSAHMRFTHGVVMKHSCEVCSASFPHHYLMLAHWRAHAGPPLVCDLCPKSFRSKDKYGEHLNTHLRERLYPCPVCLQRYPVLLHLHRHAEKHTQEDTLSCNICKESYRSLIDLRRHSERDHGEKEEFPCYVCSRILSSSADFLTHVRTHDNALHACAFCPRKFTDAQKWEEHSAEHIEKIGRGESVEKPYSCEYCKKSFEYQSVLKTHIRMHTGERPYECPECKKKLKTQSALTEHVNGHKRPYPCPECKQRFGKRNSLSRHMLLHTGERPHSCTGCPMTFVQRSSMLQHMRRFHEPGLKRAPKSKKGAKKTNKKNDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -