Camp017442.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- PC
- Assembly
- GCA_948474715.1
- Location
- OX419667.1:3958340-3969184[+]
Transcription Factor Domain
- TF Family
- GTF2I
- Domain
- GTF2I domain
- PFAM
- PF02946
- TF Group
- Other Alpha-Helix Group
- Description
- This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0036 45 5.0 0.0 4 42 277 315 275 320 0.90 2 4 0.0038 48 4.9 0.0 4 41 321 358 317 371 0.91 3 4 0.004 50 4.8 0.0 4 41 393 430 391 443 0.91 4 4 0.0042 53 4.7 0.0 4 41 465 502 463 511 0.91
Sequence Information
- Coding Sequence
- ATGTGGACGCTGTTCATCCCGGTTATGGACTGTTGTCAGAAAGGTAAGTGTGACACAGCTTTTATAAAAGCCGACGAGTCTTACCTGGTCGGCAAAGGTCTGGCTCCCGTAGAAGCGTACCTCAGCATCCCCGAGATCATCAGGGTCGCTAAAGAGAACAATGTGGACGCTGTTCATCTCGGTTATGGACTGTTGTCAGAAAGGTGTCTCACAGCTTTTATAAAAGCCGACGAGTCATACGTGGTTGGCAAAGGTCTGGCTCCCGTAGAAGCGTACCTCAGCATCCCCGAGATCATCAGGGTTGCTAAAGAGAACAATGTGGACGCTGTTCATCCAGGTTATGGACTGTTGTCAGAAAGAACAACGTGGACCCTGTTCATCCCGGTTATGGACTGTTGTCAGAAAGGTAAGTGTCTGACAGCTTTTATAAAAGCCGACGAATCATACGTGGTCGGCAAAGGTCTGACTCCCGTAGAAGCGTACCTCAGCATCCCTGAGATCATCAGGGTCGCTAAAGAGAACAACGTGGATGCTGTTCATCCCGGTTATGGACTGTTGTCAGAAAGGTCAGATTTCGCGCAAGCCATCGTTGATGCCGGCATGCGTTTCATCGGGCCGCACCCCTCCGTGGTGCAGAGAATGGGAGACAAGGTGGCCGCCAGGAAAGCTGCCATCGAAGCTAAGGTCCCCATCGTACCGGGCACGGACGGTCCTATTACAACCAAAGAAGAGGCCGTAGACTTCTGCAAGAAACATGGTCTTCCAGTCATCTTCAAGGCGGCCTTCGGTGGCGGCGGTCGCGGTATGCGAGTAGTGCGGGACATGAACGAAGTGGAATCCGCCTTCGAGCGTGCCTCCTCGGAAGCGCTGGGCGCTTTTGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGTACGTGACATGAACGAAGTGGAATCTGCCTTCGAGCGTGCCTCCTCAGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGAAGCGTTGGGCGCTTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGTACGTGACATGAACGAAGTGGAATCTGCCTTCGAGCGTGCCTCCTCAGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGAAGCGTTGGGCGCTTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGTACGTGACATGAACGAAGTAGAATCTGCCTTCGAGCGTGCCTCCTCGGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCCTGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCATATTGAGGTCCAACTGCTTGAAGCGTTGGGCGCCTTCGGCAACGGATCCATGTTTATAGAACGCTTCATCGAACGGCCGAGGCAtattgaggtccaactgcttgGTGACAAGGCTGGCAATGTGGTACATTTGTATGAGCGCGACTGCTCCGTGCAGCGCCGGCACCAGAAGGTCGTCGAGGTGGCCCCTGCGCCCGGGCTGGACCCTGAGGTTCGCAAAAAGATGACCGACTGCGCTGTCCACCTGGCCAAGCATGTTGGCTACGAGAACGCCGGCACCGTGGAGTTCCTGCTAGACAGCAAAGGCAACTTCTACTTCATCGAGGTCAACGCTAGGTCAGTTATATCCACTGTTTGTTAG
- Protein Sequence
- MWTLFIPVMDCCQKGKCDTAFIKADESYLVGKGLAPVEAYLSIPEIIRVAKENNVDAVHLGYGLLSERCLTAFIKADESYVVGKGLAPVEAYLSIPEIIRVAKENNVDAVHPGYGLLSERTTWTLFIPVMDCCQKGKCLTAFIKADESYVVGKGLTPVEAYLSIPEIIRVAKENNVDAVHPGYGLLSERSDFAQAIVDAGMRFIGPHPSVVQRMGDKVAARKAAIEAKVPIVPGTDGPITTKEEAVDFCKKHGLPVIFKAAFGGGGRGMRVVRDMNEVESAFERASSEALGAFGNGSMFIERFIERPRHIEVQLLVRDMNEVESAFERASSEALGAFGNGSMFIERFIERPRHIEVQLLEALGAFGNGSMFIERFIERPRHIEVQLLVRDMNEVESAFERASSEALGAFGNGSMFIERFIERPRHIEVQLLEALGAFGNGSMFIERFIERPRHIEVQLLVRDMNEVESAFERASSEALGAFGNGSMFIERFIERPRHIEVQLLEALGAFGNGSMFIERFIERPRHIEVQLPEALGAFGNGSMFIERFIERPRHIEVQLLEALGAFGNGSMFIERFIERPRHIEVQLLGDKAGNVVHLYERDCSVQRRHQKVVEVAPAPGLDPEVRKKMTDCAVHLAKHVGYENAGTVEFLLDSKGNFYFIEVNARSVISTVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -