Basic Information

Insect: Cydia amplana
Gene Symbol: Nup98-96
Assembly: GCA_948474715.1
Location: OX419680.1:4976689-4985829[+]

Transcription Factor Domain

TF Family: GTF2I
Domain: GTF2I domain
PFAM: PF02946
TF Group: Other Alpha-Helix Group
Description: This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.011 1.4e+02 3.4 0.0 43 65 12 34 10 41 0.86

2 7 0.01 1.3e+02 3.5 0.0 43 65 70 92 67 99 0.86

3 7 0.01 1.3e+02 3.5 0.0 43 65 128 150 125 157 0.86

4 7 0.01 1.3e+02 3.5 0.0 43 65 186 208 183 215 0.86

5 7 0.01 1.3e+02 3.5 0.0 43 65 244 266 241 273 0.86

6 7 0.01 1.3e+02 3.5 0.0 43 65 302 324 299 331 0.86

7 7 0.015 1.9e+02 3.0 0.0 43 63 360 380 357 384 0.91

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.011	1.4e+02	3.4	43	65	12	34	10	41	0.86
2	7	0.01	1.3e+02	3.5	43	65	70	92	67	99	0.86
3	7	0.01	1.3e+02	3.5	43	65	128	150	125	157	0.86
4	7	0.01	1.3e+02	3.5	43	65	186	208	183	215	0.86
5	7	0.01	1.3e+02	3.5	43	65	244	266	241	273	0.86
6	7	0.01	1.3e+02	3.5	43	65	302	324	299	331	0.86
7	7	0.015	1.9e+02	3.0	43	63	360	380	357	384	0.91

Sequence Information

Coding Sequence: ATGACGCGAGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGCGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGTGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGCGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGCGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGCGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGGTAAGTGTCGCCTTATACAGTGTTCTAGGGCTCCCGTTCTGTCGTGGGGTACAGAATACTCCACCAGACTCCACCACATGACCCGCGAGCCACCGCCGGCCGCGCCGCACCCGGCAGGCGTGAAGCTGACCAGACCCGGGTACTACACCATACCCTCACTAGAAGAGATGGTCGCATACATGCGTCCGGATGGGTCGTGCGTGGTGCCACACCTGACTATTGGTCGAAAGAACTACGGAAACGTGTTTTACGATTGCGAGGTCGACGTTGCCAACCTTGATCTCGACGCGTTAGTACACTTCCTAAACAAGGAGGTAATAGTGTACCCCGAGGACTCCGACAAGCCGCCGGTAGGCCAGGGTCTGAACCGGCGCGCCGTGGTCACGCTCGACCGCATCTGGCCCAGGGACAAGACGGAGAAGACCCCCATCACGGACCCGGAGAGGTACAGTACACAATTATGTTATTTTTCAGTACACTTCCTAAACAAGGAATTAATAGTGTACCCCGAGGACTCCGACAAGCCGCCAGTAGGCCAGGGTCTGAACCGGCGCGCCGTGGTCACGCTCGACCGCATCTGGCCCAGGGACAAGACGGAAAAGACCCCCATCACGGACCCGGAGAGTACACTTCCTAAACAAGGTGATAGTGTACCCCGAGGACTCCGACAAGCCGCCAGTAGGCCAGGGTCTGACCGGCGCGCCGTGGTCACGCTCGACCGCATCTGGCCCAGGGACAAGACGGAAAAGACCCCCATCACGGACCCTGAGAGATTACTAACAATGGACTACGAGGGTAAGCTGCGTCGTGTGTGCGACAAACACGACACGAAATTCATCGAATACCGCCCGCAGACCGGCAGTTGGGTCTTCCGGGTGGAGCATTTCAGCAAGTACGGGTTGACAGACTCCGACGAGGAGGATGACCCCACGCCGACGGTTCTCAAGCGGCAGCTGGTCGACGAGAATTTGCAGAAAAACGCCGCCCCAGCTCAAATACCACCAGTATCAGCAGCGCCCGGCCTCGGAGGCCTCAGCAGCCTCGCCGGCCCCGGGCTGGGCGGCCTCGGCCTCAGCGGGCCCGGCCTCGGCGGCCTCGGGGCGCCAGGATTGGGAGATGACAGCTTGTATGCCATGCAGCATACGTCACTCGATCTGCTGGGTCAGGCTGGGAAAGCCTTTGAGATGGACACGACAGAAGACAACGGCGAGTCTCAGAGCCTTTACGACTCTACCAGAGGATTTGGAGTGAAGAGTCCGACTGCAGAACTGGCCCGCTTGGAGAACAGACAGAGCCACCATGTGCAATTGATGAAGGCATCTATTTATGCTGATGACATGGATATGGACGACGGTACGTCCACCTCGACGGGCGACCAGCAGGTGCCCGCGCCGCGGAGCGTGTTCCGTCTCGCCCCGCGCGACAACCTGCCTCGCGTCGTGGAGGCCGGGGCGTTAGTGCACCTGCCCGACATCCAGGCTGGCGTGGGTAAGACCAACAAATAG
Protein Sequence: MTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVGKCRLIQCSRAPVLSWGTEYSTRLHHMTREPPPAAPHPAGVKLTRPGYYTIPSLEEMVAYMRPDGSCVVPHLTIGRKNYGNVFYDCEVDVANLDLDALVHFLNKEVIVYPEDSDKPPVGQGLNRRAVVTLDRIWPRDKTEKTPITDPERYSTQLCYFSVHFLNKELIVYPEDSDKPPVGQGLNRRAVVTLDRIWPRDKTEKTPITDPESTLPKQGDSVPRGLRQAASRPGSDRRAVVTLDRIWPRDKTEKTPITDPERLLTMDYEGKLRRVCDKHDTKFIEYRPQTGSWVFRVEHFSKYGLTDSDEEDDPTPTVLKRQLVDENLQKNAAPAQIPPVSAAPGLGGLSSLAGPGLGGLGLSGPGLGGLGAPGLGDDSLYAMQHTSLDLLGQAGKAFEMDTTEDNGESQSLYDSTRGFGVKSPTAELARLENRQSHHVQLMKASIYADDMDMDDGTSTSTGDQQVPAPRSVFRLAPRDNLPRVVEAGALVHLPDIQAGVGKTNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -