Basic Information

Insect: Cydia amplana
Gene Symbol: -
Assembly: GCA_948474715.1
Location: OX419679.1:7841898-7868636[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.081 2.9e+02 2.4 0.0 3 23 589 609 587 635 0.76

2 6 0.15 5.4e+02 1.5 0.0 4 23 653 672 651 697 0.77

3 6 0.15 5.4e+02 1.5 0.0 4 23 716 735 714 760 0.77

4 6 0.16 5.7e+02 1.5 0.0 4 22 779 797 777 820 0.77

5 6 0.15 5.4e+02 1.5 0.0 4 23 842 861 840 886 0.77

6 6 1.8e-12 6.4e-09 36.6 0.0 4 89 905 977 903 977 0.89

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.081	2.9e+02	2.4	3	23	589	609	587	635	0.76
2	6	0.15	5.4e+02	1.5	4	23	653	672	651	697	0.77
3	6	0.15	5.4e+02	1.5	4	23	716	735	714	760	0.77
4	6	0.16	5.7e+02	1.5	4	22	779	797	777	820	0.77
5	6	0.15	5.4e+02	1.5	4	23	842	861	840	886	0.77
6	6	1.8e-12	6.4e-09	36.6	4	89	905	977	903	977	0.89

Sequence Information

Coding Sequence: ATGAAAGGGCAGATTACTTCTTGCTGTGGTGTTATAAATGGACAAAATAGGCTACTTACATATCAGAGTAGATGTCTTCAAAAAATCTTGGGCACTCTCACAAACACTAATATAGATCTGCCCTTGACTAGTACACAAGAAGCACTAAATCAGTCCGGTCCGGAAGGATTGATATTTCTTCAAGATGATTTGCCGCTGGATATCCAAAATGAAGAACTGATATCATCACCAGCACCACCTCCAACCCAGCCTGTCTCTGTTGCCATGACCCCTGGGCATGAGAGCCCTATCCTTCCAGTTCCGAAGCCAGCAGATCCAGAGCCGTCGGTGAAGTCTAGTGCTCAACAGCCAGATCCAGCGCCCACAAATCCTGACCATCTGACTGAGACGCGCCGATCTCGACCGCGTCGTGGAGTTGTTTCGGCCCAAAGTAGGACGTGCGCCACAAAAAAAGATGACTGTCTTCCAACGGCCCCTGCTGACGAGGTGCTGGCCATAAACGACAAGGTGGTGCTGAAGGCCGAGGACCTGCTGTCGTGGGTGTGCGGCGGCGAGGAGTGGCGCTGGGGGCTCCGCGCCGTGTGGCGCGGCGACTGCGCCCCGCCCGCGCAGCCGCGCCGCTCGCAGCCGCTCCACCACACCCGGCTCGACTTTAGCGACGTCGACAAGGAGAAAAACGCCATCAACGAGGACTCGGACAGCCCCGGCGTGGTAGTTTTCTCATACCCTCGCTACTGCCGCTACCGGGCGCTCCTCTCCCGGCTCGAGGGCCTCCAGGGGGACTGGCTCAGGGACAGCCTGGTGTGCGCGCTCGGGGGCTACGCGGCGCCCACCAAGAACACCAGGATACTCTACTGCAAGGACACATTCGAGTACCCAGAGCTGGAAGGCCACGAGTTCGTCTGCAACCAGCTCGCGCCGAAGCTGAAGGGGCGACCACGGGGTCGGCGCCGGAAACGAGCATCCAACCACTCTCCGTCCCTCTCCGACAGATCTAGTGACAGCGACTCGCAGAAACGCGTCGAGCAACCTGCTGAGGTGAGTCACAGACACCTCGTGAGGCGCTCACGAAGAGGAGTTAGGCTACAACCAGCTCGCGCCGAAGCTGAAGGGGCGACCGCGGGGTCGGCGTCGGAAACGAGCCTCCAACCACTCTCCCTCGCGCCGAAGCTGAAGGGGCGACCGCGGGGTCGGCGTCGGAAACGAGCCTCCAACCACTCTCCGTCCCTCTCCGACAGATCTAGTGACAGCGACTCGCAGAAACGCGTCGAGCAACCTGCTGAGCTCGCGCCGAAGCTGAAGGGGCGACCGCGGGGTCGGCGTCGGAAACGAGCCTCCAACCACTCTCCGTCCCTCTCCGACAGATCTAGTGACAGCGACTCGCAGAAACGCGTCGAGCAACCTGCTGAGCTCGCGCCGAAGCTGAAGGGGCGACCGCGGGGTCGGCGTCGGAAACGAGCCTCCAACCACTCTCCGTCCCTCTCCGACAGATCTAGTGACAGCGACTCGCAGAAACGCGTCGAGCAACCTGCTGAGGAGTTAGGCTACAACCAGCTCGCGCCGAAACTGAAGGGGCGACCGCGGGGTCGGCGTCGGAAACGAGCCTCCAACCACTCCCCGTCCCTCTCCGACAGATCTAGTGACAGCGACTCGCAGAAACGCGTCGAGCAACCTGCTGAGCTTCAGCCCCCGCGGCGGCTGTCGCTCCGCAACGGCGCGCCCAAATACAGCGAGGAAGATGACAAGGAAACCAGCGCCGAGGACAGAGCCTTCATCGGCCATCTCAAGCAGTTCTACAAGCAGAGGGGGGAAGCCTTCAAGCCTGCACACTCGCTCAAAGAGCGTGAGTATTTAAATTACTGGTTAAAAGTGGCCGCCATTTTGAATGGCTTACTTACTAAGTTGCGAACGTGTATAAAGTATGGTGAGGATGAGGACAGAGACTATGGAGATGGAACCTTCATCGGACACCTCAAGCAGTTCTACAAGCAGAGGGGGGAAGCCTTCAAGCCTGCACACTCGCTCAAAGAGCGTGAGTATTTAAATTACTGGTTAAAAGTGGCCGCCATTTTGAATGGCTTACTTACTAAGTTGCGAACGTGTATAAAGTATGGTGAGGATGAGGACAGAGACTATGGAGATGGAACCTTCATCGGACACCTCAAGCAGTTCTACAAGCAGAGGGGGGAAGCCTTCAAGCCTGCACACTCGCTCAAAGAGCGTGAGTATTTAAATTACTGGTTAAAAGTGGCCGCCATTTTGAATGGCTTACTTACTAAGTTGCGAACGTGTATAAAGTATGGTGAGGATGAGGACAGAGACTATGGAGATGGAACCTTCATCGGACACCTCAAGCAGTTCTACAAACAGAGGGGGGAAGCCTTCAAGCCTGCACACTCGCTCAAAGAGCGTGAGTATTTAAATTACTGGTTAAAAGTGGCCGCCATTTTGAATGGCTTACGTACTAAGTTGCGAACGTGTATAAAGTATGGTGAGGATGAGGACAGAGACTATGGAGATGGAACCTTCATCGGACACCTCAAGCAGTTCTACAAGCAGAGGGGGGAAGCCTTCAAGCCTGCACACTCGCTCAAAGAGCGTGAGTATTTAAATTACTGGTTAAAAGTGGCCGCCATTTTGAATGGCTTACTTACTAAGTTGCGAACGTGTATAAAGTATGGTGAGGATGAGGACAGAGACTATGGAGATGGAGCCTTCATCGGCCATCTCAAGCAGTTCTACAAGCAGAGGGGGGAGGCGTTCAAGCCTGCACACTCGCTCAAAGAGCTGTCGCTGAGAGCGCTGTACCACTCCGTGACAAACGCTGGCGGCTACGAATCGGCCTGCAGGCACAAATTGTGGCGACAGATCCACCCCCCTCAGCCCAATACTGCGCGACGACACTACGAGAGATTCCTGCTGCCCCTAGAAAAGCACGAAGTGTCCACCGGACTCCGAACGCTACCCAAACTGAACGGCGCCGTCGAACCACCCACAGTCACCATAGAGCTGGCTGACAGTCGTGAACCCAGTCCCGTGCCCAAAGAAGAAGCGAAGGACTTCAGCGTCACTTCCAAACCTGCTGAGGAACTGAACAGGGAGTTCCTAGACTCCTTACCACCGAAGGAAGAAAATAAAGTAAGATTATTGACATAA
Protein Sequence: MKGQITSCCGVINGQNRLLTYQSRCLQKILGTLTNTNIDLPLTSTQEALNQSGPEGLIFLQDDLPLDIQNEELISSPAPPPTQPVSVAMTPGHESPILPVPKPADPEPSVKSSAQQPDPAPTNPDHLTETRRSRPRRGVVSAQSRTCATKKDDCLPTAPADEVLAINDKVVLKAEDLLSWVCGGEEWRWGLRAVWRGDCAPPAQPRRSQPLHHTRLDFSDVDKEKNAINEDSDSPGVVVFSYPRYCRYRALLSRLEGLQGDWLRDSLVCALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNQLAPKLKGRPRGRRRKRASNHSPSLSDRSSDSDSQKRVEQPAEVSHRHLVRRSRRGVRLQPARAEAEGATAGSASETSLQPLSLAPKLKGRPRGRRRKRASNHSPSLSDRSSDSDSQKRVEQPAELAPKLKGRPRGRRRKRASNHSPSLSDRSSDSDSQKRVEQPAELAPKLKGRPRGRRRKRASNHSPSLSDRSSDSDSQKRVEQPAEELGYNQLAPKLKGRPRGRRRKRASNHSPSLSDRSSDSDSQKRVEQPAELQPPRRLSLRNGAPKYSEEDDKETSAEDRAFIGHLKQFYKQRGEAFKPAHSLKEREYLNYWLKVAAILNGLLTKLRTCIKYGEDEDRDYGDGTFIGHLKQFYKQRGEAFKPAHSLKEREYLNYWLKVAAILNGLLTKLRTCIKYGEDEDRDYGDGTFIGHLKQFYKQRGEAFKPAHSLKEREYLNYWLKVAAILNGLLTKLRTCIKYGEDEDRDYGDGTFIGHLKQFYKQRGEAFKPAHSLKEREYLNYWLKVAAILNGLRTKLRTCIKYGEDEDRDYGDGTFIGHLKQFYKQRGEAFKPAHSLKEREYLNYWLKVAAILNGLLTKLRTCIKYGEDEDRDYGDGAFIGHLKQFYKQRGEAFKPAHSLKELSLRALYHSVTNAGGYESACRHKLWRQIHPPQPNTARRHYERFLLPLEKHEVSTGLRTLPKLNGAVEPPTVTIELADSREPSPVPKEEAKDFSVTSKPAEELNREFLDSLPPKEENKVRLLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -