Basic Information

Insect: Cydalima perspectalis
Gene Symbol: -
Assembly: GCA_951394215.1
Location: OX596209.1:3447584-3457911[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.3 1e+02 4.2 0.4 1 23 89 112 89 112 0.90

2 19 0.52 41 5.4 0.1 3 23 117 137 115 137 0.96

3 19 0.78 61 4.9 0.1 2 23 141 163 140 163 0.94

4 19 1.7 1.3e+02 3.8 2.1 2 23 393 415 392 415 0.96

5 19 0.57 44 5.3 0.1 1 21 423 443 423 444 0.94

6 19 0.014 1.1 10.4 0.8 3 23 455 475 454 475 0.97

7 19 1.1 89 4.4 0.7 1 23 491 514 491 514 0.84

8 19 0.035 2.7 9.1 1.7 1 23 523 546 523 546 0.93

9 19 2.8 2.2e+02 3.1 1.4 1 23 557 580 557 580 0.93

10 19 0.52 40 5.4 0.3 3 23 626 647 624 647 0.83

11 19 7.3e-05 0.0057 17.6 1.1 1 23 681 703 681 703 0.97

12 19 0.00035 0.027 15.4 1.1 1 23 710 732 710 732 0.98

13 19 8.8e-05 0.0069 17.3 2.3 1 23 737 759 737 759 0.96

14 19 0.00015 0.012 16.5 0.7 1 23 765 787 765 787 0.98

15 19 3.1e-05 0.0025 18.7 1.1 1 23 793 815 793 815 0.94

16 19 5.7e-05 0.0045 17.9 1.6 2 23 822 843 822 843 0.98

17 19 0.0024 0.19 12.8 0.7 2 23 852 874 851 874 0.97

18 19 0.0029 0.23 12.5 0.5 1 23 879 901 879 901 0.97

19 19 1.7e-05 0.0013 19.5 1.9 1 23 907 930 907 930 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.3	1e+02	4.2	0.4	1	23	89	112	89	112	0.90
2	19	0.52	41	5.4	0.1	3	23	117	137	115	137	0.96
3	19	0.78	61	4.9	0.1	2	23	141	163	140	163	0.94
4	19	1.7	1.3e+02	3.8	2.1	2	23	393	415	392	415	0.96
5	19	0.57	44	5.3	0.1	1	21	423	443	423	444	0.94
6	19	0.014	1.1	10.4	0.8	3	23	455	475	454	475	0.97
7	19	1.1	89	4.4	0.7	1	23	491	514	491	514	0.84
8	19	0.035	2.7	9.1	1.7	1	23	523	546	523	546	0.93
9	19	2.8	2.2e+02	3.1	1.4	1	23	557	580	557	580	0.93
10	19	0.52	40	5.4	0.3	3	23	626	647	624	647	0.83
11	19	7.3e-05	0.0057	17.6	1.1	1	23	681	703	681	703	0.97
12	19	0.00035	0.027	15.4	1.1	1	23	710	732	710	732	0.98
13	19	8.8e-05	0.0069	17.3	2.3	1	23	737	759	737	759	0.96
14	19	0.00015	0.012	16.5	0.7	1	23	765	787	765	787	0.98
15	19	3.1e-05	0.0025	18.7	1.1	1	23	793	815	793	815	0.94
16	19	5.7e-05	0.0045	17.9	1.6	2	23	822	843	822	843	0.98
17	19	0.0024	0.19	12.8	0.7	2	23	852	874	851	874	0.97
18	19	0.0029	0.23	12.5	0.5	1	23	879	901	879	901	0.97
19	19	1.7e-05	0.0013	19.5	1.9	1	23	907	930	907	930	0.98

Sequence Information

Coding Sequence: ATGTCTTCTGATGATTCTGACGACGAACCTTTGTCGGTCTTAGCTGCCGCTAAAAAACTGAATCCCGAAAAATTTAAGTTCCTTGATCCTTCAGCTATTGAGATCATCCCTGTCCGTAAACGAAAGAAAAGGAAGCTGCTTTTGGAGCCTGAAAGCTTGTCTCTCACGATAAAGCTATGTAGAAGTAGGCCAGGAGATGTAAGAATAGTGGATAGGCCCACGGATGTCTGGATGTACTTGAAAGACATGAACCCGACGGGACCATATAGCTGTTTGATGTGCTCATATTGGTTCATAAACAGAACAAAACTCATAATACACTATGTATTAAACCATAAAAAGGATTTCTGTGGTATCTGCAGGTATTTTGTGGCTGATAGAGAAGATTGGATTAATCACTTGAAGTTTCATACACCCTGGCCCTGTTCCCAGTGCAACAATACATATCCAACAGAATTGGAAGCACGGAAACATCTTAGTTCTGTTCACAATCTTGTCCATTGCCGTTTGTGTCACTTTAGAACAACTGACGATGAACAGTATGACAATCATCTCTTCCAGAAGCATAATGTCACAAATGTATCTAGTAAAGACTCTGAACACATTTGGGAACTTCAGTTTGATGGGGAACAAAAGTTCCTGTGTCTACTTTGCGCTAAAGgaaataatttatcatcaaCATTCTTCAGCCATTACATGGGCTTTCATCACTTCACCCTTAAATGTCTCACCAGTATTATTTCTGGGGCTGATCCTCCTTTTTTGGTTGAAGGTGCTAATGTGACAAGTGATTTTATTGAAGGTCAGTTAAAGAACCAAGAGAGAGTTGGCTATGTAGATTCTGGTAAGAAGTTAGAACCAGAAACGGAAGAGGAAAATGCGGAATCCTCAACAATAGTTTTGGTACCAGAAATCAAGCAGGAAATGCTTAGTGACAATGAGATGAAtgaagtagatataaataccAACATGTCTGCTAAGGCTGAAGATCCATTGACTTTGACTGCTTATAAAGGGGAAATAGACTTTGATGTTACATTAGTAGAGTTGGTTGTTCTACAGAAAAGCTATTTTGATTATGTCAATTGGACCCTTAGTCATATAAATTCGAATACATTACCTGAAGAGTCTGTGCTTGATTATAGGACTCTAAAGAAGGATTTACCAGTTGACGTCACTTGTACACTGTGTAAAACGAAGATTAATTCTGTGCACACATTTGTTACTCATATGTCAAAGATACATTCGGTTAAATCAGTGCCGATGTATTCATGTAGAGTATGCGCTACAACATTTGATGCACGCAATGAGTTTGAAAGTCATTTGATGGAGGAGTTTAGTGAATTTGATGACTTGTGGCTGTGCCAGTTCTGTGATAAGGAATTTGATAATAGAGTGGCGACAAGAAAACATTTGAATGAACATTGGGATGTTATTGAGTATGATAACTGCTTCAGTCCCCACTTGGGGttcaaatgtaaatattgtCCTACGCTTTTTTGGAAtgagacagacagagagactcATCAAGTTAGAGTGCACTATGTCAACCATAAAAATCAGTTTTATAAATGTCAAACTTGTTTAGAAATATTTAGTGATAAgATATGGTTTATTCATCATTATTTAGACAGACACCAAACAGAAAAAAATGGGACGAAATTCCTTTTCAAGTGTAACCTCTGCAGTCTGGCCTTGCACACTATGGATGAGATGAGAAGCCACTTCACAATGGAGCATCCAGAAGCGAGGAAGATATTCTGTACTCTCGGGTCTTGCCTGTACAGGCCTCTTAGTCAGCGCAAGTCATTCAAACTCCATGTTAAGACGTTCCATGCAAACGCTGGCCGCGGTCCGAACGAGAACGCGACTAACTGTCCCCTGTGCGGGCGCGAGTtcggcagcgcgcgcgcgtgcggcgcgcaCATGTCGCAGGCGCACGGCACCGGCAAGTTCAAGTGCAAGCTGTGCCGGGACGTCATGAGCACCATGGACGAGAGGAAGCTCCACTACCTGATCCGGCACCCGGGGCGGCACCCGTTCGAGTGCGCAGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCAGGAGCACTCGCCCAACAAGCAGAGCTACACCTGCAGCTACTGCGCGAAGGTGTTCATGAAAAAAGATTCATACCGAGAACACGTCCAGATTCACGAGGGTCCACGCCATGCGTGCTCGTACTGCCCGATGCGTTTCGTACAACGCTCGAATATGCTGCGGCACGAGCGGCGGCACACGGGCGAACGGCCCTACGCGTGCCCGCAGTGCCCGCGCACCTTCGCCGACAAGGGCGCCTGCACCTCGCACCTCAGAACACACTCGAAGGACAGATCCTACGCCTGCATTTACTGTGGGCAGACATTTGTTCAAAAGTCGAAATTGACATATCATATCAGGAAGCATACTGGAGAaaACCTGGAGACGTGTCCGGTGTGCTCGAAGCTGTTCACGAGCGCGTGTTCGCTGCGCGAGCACATGCGCATACACGACCGGTCGCAGATGGAGTCGGTGCAGTGTCCTTTGTGCGATCGCAAGTACCAGAACGGGCGGTACATGATGAGGCACCTGCGCACGATGCACAACAAGGAGCGGTTCTCGTGCCCGCTGTGCCGCAAGTCGCTCACCAGCGTGGCGGGGCTGCGCCACCACGTCGTCACGCACGGACGCGCCAACATGTACAAGTGCAAGGTTTGCCCTAAGACCTACGCCGTAAGGAGAACCCTCATGAAGCACCTTCGCAAACGACACGGCATCAAAACTTCAGACATTAACGTGAAGGACTACTTTCAACGCCTCGACCCCCGCGAATGCAAACTGCCTTTGGACGAGGAAGCCATCACTAAAATATTCGGCCCGCCTCCGAAGAAAACTAACAACGATATTCTTATTGGTGACTTCGTTACTTTCACAAAGACACTCAAGATGGCTGCTAATTTGGACCATGttaaagatgatgataatgatgaagaCGATGAGGATGATGAGGAGCAGGAGAAGGAGTCCGGCGAGGAGAGTGAAGGAGAGTTCAGCAAGGACAAGAATAATGAGCTACAGGAAGAAGGGGAGTTGGAGCCGACGGACTTCGTCAGCGTCAAGATTGAACATGTTGATGAAGGGATAGAAGAAGAAGATTGA
Protein Sequence: MSSDDSDDEPLSVLAAAKKLNPEKFKFLDPSAIEIIPVRKRKKRKLLLEPESLSLTIKLCRSRPGDVRIVDRPTDVWMYLKDMNPTGPYSCLMCSYWFINRTKLIIHYVLNHKKDFCGICRYFVADREDWINHLKFHTPWPCSQCNNTYPTELEARKHLSSVHNLVHCRLCHFRTTDDEQYDNHLFQKHNVTNVSSKDSEHIWELQFDGEQKFLCLLCAKGNNLSSTFFSHYMGFHHFTLKCLTSIISGADPPFLVEGANVTSDFIEGQLKNQERVGYVDSGKKLEPETEEENAESSTIVLVPEIKQEMLSDNEMNEVDINTNMSAKAEDPLTLTAYKGEIDFDVTLVELVVLQKSYFDYVNWTLSHINSNTLPEESVLDYRTLKKDLPVDVTCTLCKTKINSVHTFVTHMSKIHSVKSVPMYSCRVCATTFDARNEFESHLMEEFSEFDDLWLCQFCDKEFDNRVATRKHLNEHWDVIEYDNCFSPHLGFKCKYCPTLFWNETDRETHQVRVHYVNHKNQFYKCQTCLEIFSDKIWFIHHYLDRHQTEKNGTKFLFKCNLCSLALHTMDEMRSHFTMEHPEARKIFCTLGSCLYRPLSQRKSFKLHVKTFHANAGRGPNENATNCPLCGREFGSARACGAHMSQAHGTGKFKCKLCRDVMSTMDERKLHYLIRHPGRHPFECAECGKSFQYKSSLYMHKQEHSPNKQSYTCSYCAKVFMKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPQCPRTFADKGACTSHLRTHSKDRSYACIYCGQTFVQKSKLTYHIRKHTGENLETCPVCSKLFTSACSLREHMRIHDRSQMESVQCPLCDRKYQNGRYMMRHLRTMHNKERFSCPLCRKSLTSVAGLRHHVVTHGRANMYKCKVCPKTYAVRRTLMKHLRKRHGIKTSDINVKDYFQRLDPRECKLPLDEEAITKIFGPPPKKTNNDILIGDFVTFTKTLKMAANLDHVKDDDNDEDDEDDEEQEKESGEESEGEFSKDKNNELQEEGELEPTDFVSVKIEHVDEGIEEED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365136;
90% Identity: -
80% Identity: -