Basic Information

Insect: Cydalima perspectalis
Gene Symbol: -
Assembly: GCA_951394215.1
Location: OX596201.1:3486446-3494372[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.001 0.08 13.9 3.7 1 23 204 226 204 226 0.99

2 31 0.00047 0.037 15.0 0.2 3 20 258 275 256 277 0.94

3 31 8.2e-05 0.0064 17.4 0.3 2 23 308 330 308 330 0.97

4 31 4.1 3.2e+02 2.6 0.2 3 20 350 367 349 369 0.85

5 31 0.65 51 5.1 0.1 1 23 379 402 379 402 0.93

6 31 0.02 1.6 9.9 0.1 1 23 420 442 420 442 0.96

7 31 0.00012 0.0094 16.9 2.5 2 23 484 506 483 506 0.96

8 31 0.00094 0.073 14.1 3.8 2 23 546 568 546 568 0.97

9 31 0.074 5.8 8.1 0.1 1 23 618 641 618 641 0.95

10 31 0.00046 0.036 15.0 0.1 1 23 705 727 705 727 0.97

11 31 0.00014 0.011 16.7 3.6 2 23 739 760 738 760 0.97

12 31 0.079 6.2 8.0 1.2 2 23 772 793 771 793 0.96

13 31 0.0042 0.33 12.0 1.7 1 23 803 825 803 825 0.98

14 31 0.0048 0.38 11.8 5.0 1 23 854 876 854 876 0.97

15 31 0.00088 0.068 14.2 2.7 1 23 887 909 887 909 0.98

16 31 1.9e-05 0.0014 19.4 0.7 1 23 917 939 917 939 0.97

17 31 0.00065 0.051 14.6 0.4 2 23 959 981 958 981 0.97

18 31 1.3 1e+02 4.2 0.3 1 23 999 1021 999 1021 0.89

19 31 0.86 67 4.8 3.7 1 23 1028 1050 1028 1050 0.93

20 31 0.047 3.7 8.7 2.5 2 23 1061 1083 1060 1083 0.92

21 31 0.00085 0.066 14.2 0.3 1 23 1105 1127 1105 1127 0.97

22 31 0.73 57 5.0 0.1 2 20 1131 1149 1130 1150 0.92

23 31 9.7 7.6e+02 1.4 3.9 2 23 1170 1192 1169 1192 0.94

24 31 0.0036 0.28 12.3 0.3 2 23 1208 1229 1207 1229 0.93

25 31 3 2.4e+02 3.0 5.5 5 23 1239 1257 1237 1257 0.94

26 31 0.014 1.1 10.4 0.7 2 23 1268 1290 1267 1290 0.95

27 31 1.9 1.4e+02 3.7 4.4 2 23 1307 1325 1307 1325 0.90

28 31 6.7 5.2e+02 1.9 1.8 2 20 1329 1347 1329 1348 0.90

29 31 0.18 14 6.9 0.5 2 23 1398 1419 1397 1419 0.93

30 31 0.0013 0.1 13.6 0.7 2 23 1430 1452 1429 1452 0.96

31 31 0.2 16 6.7 1.7 2 21 1490 1509 1490 1510 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.001	0.08	13.9	3.7	1	23	204	226	204	226	0.99
2	31	0.00047	0.037	15.0	0.2	3	20	258	275	256	277	0.94
3	31	8.2e-05	0.0064	17.4	0.3	2	23	308	330	308	330	0.97
4	31	4.1	3.2e+02	2.6	0.2	3	20	350	367	349	369	0.85
5	31	0.65	51	5.1	0.1	1	23	379	402	379	402	0.93
6	31	0.02	1.6	9.9	0.1	1	23	420	442	420	442	0.96
7	31	0.00012	0.0094	16.9	2.5	2	23	484	506	483	506	0.96
8	31	0.00094	0.073	14.1	3.8	2	23	546	568	546	568	0.97
9	31	0.074	5.8	8.1	0.1	1	23	618	641	618	641	0.95
10	31	0.00046	0.036	15.0	0.1	1	23	705	727	705	727	0.97
11	31	0.00014	0.011	16.7	3.6	2	23	739	760	738	760	0.97
12	31	0.079	6.2	8.0	1.2	2	23	772	793	771	793	0.96
13	31	0.0042	0.33	12.0	1.7	1	23	803	825	803	825	0.98
14	31	0.0048	0.38	11.8	5.0	1	23	854	876	854	876	0.97
15	31	0.00088	0.068	14.2	2.7	1	23	887	909	887	909	0.98
16	31	1.9e-05	0.0014	19.4	0.7	1	23	917	939	917	939	0.97
17	31	0.00065	0.051	14.6	0.4	2	23	959	981	958	981	0.97
18	31	1.3	1e+02	4.2	0.3	1	23	999	1021	999	1021	0.89
19	31	0.86	67	4.8	3.7	1	23	1028	1050	1028	1050	0.93
20	31	0.047	3.7	8.7	2.5	2	23	1061	1083	1060	1083	0.92
21	31	0.00085	0.066	14.2	0.3	1	23	1105	1127	1105	1127	0.97
22	31	0.73	57	5.0	0.1	2	20	1131	1149	1130	1150	0.92
23	31	9.7	7.6e+02	1.4	3.9	2	23	1170	1192	1169	1192	0.94
24	31	0.0036	0.28	12.3	0.3	2	23	1208	1229	1207	1229	0.93
25	31	3	2.4e+02	3.0	5.5	5	23	1239	1257	1237	1257	0.94
26	31	0.014	1.1	10.4	0.7	2	23	1268	1290	1267	1290	0.95
27	31	1.9	1.4e+02	3.7	4.4	2	23	1307	1325	1307	1325	0.90
28	31	6.7	5.2e+02	1.9	1.8	2	20	1329	1347	1329	1348	0.90
29	31	0.18	14	6.9	0.5	2	23	1398	1419	1397	1419	0.93
30	31	0.0013	0.1	13.6	0.7	2	23	1430	1452	1429	1452	0.96
31	31	0.2	16	6.7	1.7	2	21	1490	1509	1490	1510	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTGGGCAAATGCAGGCTTTGCCTGAAGCTCGGCGACTTTTACTCCATCTTCGCGGTAGACAATGCCGTACAGCTCGCCGAGATGGTTATGGATTGTGCTCGGGTGAAGATTTACGAAGGGGATGGCCTGCCGGACAAGATTTGCTCGGAGTGTGTCCAAAAGCTAAGCAGCGCGTACATCTTCAAGCAGCAGTGCGAGCGCTGCGACCAGGAGTTGCGGAGGAACTATGTGCCTCCACCAGGTTTTAGCATCACCCCACCACCGCCAAACAGGCAAAGCAGTGACTCTGCTTTCTCCACGCACACAGATATCTCGAACCAGACGAAGCCGTCGTCGTCTAACGAGGCGTACCCGGCGCCGCAGTGTGCGACGCCGGCGCACCGCAGCCGCAAGCGCAGCCGCAGCGCCGACAACACCTCCGTCAGCGACCGCTCGCACGACTACGCGCCCAGCTCCAAACGCGTCTCAGAGCTGCGCTTCTCGCAGAAGAAGAAGCGCGCCACCAACTACGAGGCAGACTCTGACTATGAGGACGATAACAGCTTCTCGCAGTACTCCGGCGGAACCGACTCGGATGAGCCGCTGGTTAAGAACAAATTCAAGTGCCAGCAGTGCGACAGATCCTTTCCTACGATGAAAAGCCGATGCGCTCACATGAAGGTTCACTCGAAAGCCCAAAGCTTAGGGAAAAACGAAGTCGTCAACATTCCGAAGAAGAACGTCAGCGAGGACGCGACAGACGAGGGAGAGAAGCTAGCCTGCGAGAAATGCGGGAAAACCTTCAAGTTGAATATTATGCTGAAGCGGCACCAAGATCTTTGTGGGGTGCAGGTCGAGGTCGCCCCGCAGAAGGAGCTGATGATCGCCCTGGAACCTATCGACGCGGTGCCCAGATACAGCAGTAAGAACGAGTGCGAAATATGCACGGCTAAGTTTAAGACGGTGGAAAATCTGCAGAAGCATCTCCGTGTGGTGCACGCGGCCGCTCTGAAGCCTGACGTGTCGCCGAGTAAACAGAAGACGGTGTCTGTCCCATGTATATACTGTAGGAAGTCATTCGATGATTACTATGTGTATACAGCGCACTTTAATAGTTGCAACAAGAAGTGTGAGCTGGCTAGTTTCGAGTGCCCGGTGTGCAAGAGGGTCATGGGCAAGCGCGCGGCGTACTTCGTGCACGTGAAGAATTTGCACTTCGAACCGCGCGCGCCCAAGGCGGAGGCGGCGGAGGGCCGCAAGGAGTCGTTCGAGTGCCGCATGTGCAACAAGCTGCTGCCGACGCAGGCGCAGCTCATCACGCACCTCGCCGCGCACATGTCCAAGATCGACAATATGCCTAACGACATGGCCGACGACGACTCCAGGGCCAGTACAATCGGCGACTCGGCGTCGATGGGGTCCGAGTACAGCTCACCGCACGTCTCCTCGGGCCCGCTCAAGTGCACGCTATGCGACAAAGCGTTCAAATACAAGAAGGCTCTCGAAACACATCACATGAAGGTCCACTCGACGGAAGTCCCGGTGAAGATCGAGCCGCCCGACAAGGACTCGAGTTTGCTCAGCGAGACGCAGGACCCCGAGCCGTCCGAGTCGGAATCTAGTCAGGAGGAGGGCGACGACAACACCTGTGATATTTGCGAGAAGCAGTTCTCGTACAAGCGGCTGCTGGTGCACCACAAGCGCACGAAGCACAACGTCAGCTCGGGCACGAAGCGCGCCAAGATCAACCTGAAGGAGTGCTCGGTGCGCTGCCTCATCTGCGACCTGGAGATGCTGGTCGGCGCCATCAACGAGCACAACCGCAAGCACATCGCGCTGGGGCTGAAGCCGCGCAACGTGTacgcgtgcgcggcgtgcggcgaCCGCTTCAACAGCTGCGCCGCGCTGGCCGCGCACATCCGCTACGCGCACCGGCTgcacgcgccgcgcgcgccgcccgccccgcccgccccgcgcgcgctgcgccgcggcGACGACCTGGCGGATTTTTGTGAAGTCGTTGTGACTAAAGCGGAACCCCTGGACCCGGTCCAGAGTCACAACGACTTTGGAGTGGTTCCGAGTGGTTccgccgacgcgcccgccgtCGACCTGGCCGGGTTCACGTGTCCGATGTGCGGCAAGACGATGCCGACGTTGATATCCCTCAAGAGGCACGTTAACTGGCATTCGAACGTCGGGAACAATTTGGAGAAAAAGGTTGAGTGCTTCGTTTGCAAAGAGACATTCCGGTTCAAAGGTCACTTTAAGTTGCACATGCGCACGCACTACCGCGACCCGAACCTGGACCCGAAGCACCTGACGTGCGGCATCTGCCACCGGCGCAGCAAGAACCTgcgcgcggcgcaggcgcacaTGAACTTCCACAAGCAGACGCGTTTCCAGAACAAGGACTACGAATGCTCCATCTGCAAGCGAGTCTTCCAGCATCGGAAGGTGTATCTCTCACACATGGCCATACATTTTAAACGCGGCGAGAGTCTCCAGAACACCATCGTGGGCGATGTGCTGCCGCAGACTGCTGACAAGACCATTTTCGACGGCACCCATACCTGCTCGCTCTGTGGAAAAGTGTGCGATTCGGAAAACTCGCTGAAGCATCATGAGAGATGGCACAAGTCTAAGTCGTCGCTCTTCGGAGCGCGCCACGAGTGCTTCGTCTGCCAGCTGGTGTTTACAAACAAGCGGCGATTAGAGATCCACACTAGGACCCACTTTGAGGATGAGAACGGACCGTTTAAGTGCACCATATGCGGCAAGGGATTCATCGATGAGAATTATTTCCGCCGACACGTCAAAGGACACAACTTTGATCATCAGGTACACAAGGACCGGATCGCCAAGTTGAGAAAGGATAAAGTCAAGTGTCCCATCTGCGCCCGCTTCTACCCAGATCTGATACATCTGATCCGACACTTGAGGAGAACTCATCCGGAGAGTAAGATGATCAAAACAGATCCCGACGCCCCCCCGCCTGACTATTACTCCTGTAAGCTGTGCGCCAAAGTCTTCCTCGATGTCCAAAGACTGCAGAAGCATGAGGAGGCCCATATGAGAAAGCCCCTGTTCTTTAAATGTAAATTCTGTGGGAAAAACACAACATCCCTGAAGGTTCACAATATCCACATCAAATCACACTTGTGTCAGAAATATCTGGACGATCCTCTGAAATGTCAATACTGTGATGAGAAGTTTTACAAAGGTTACGCTCTGCATCACCATTTGCTTGACGTCCATCAGATTAGAGAGACTTGGATAGCGGAAAAGACGGAGCAGACGCTCAATGGGCCGCTGAAGGAGTTTCAGTGTTCGGTCTGCCTCAAGGTGCTAGCCAGCAAAGGCAACTTCGAGAGGCACATTGACTACCACAACACTGTAAGGTGTAACTACTGCTTCATATACTTTAGTACTCTAAGATTTCTGGAGGGCCATCTTGCATTTAGCTGTGAAAAGAAGAAACTGATAGGCGAGACCGAGATATAtccaaagaaaattaaatgcCAGGTGTGCTACAAAGCTTTCCACTTGCAAGTGAAGCTGGATTGCCACTTGCGCACGCAGCATGGCATCAAAGTGAATAGAGAAGCCTCTTTTGGCAAGAAGGAGACAGTGTGCGACTACTGTTTCAAAGTGTTCGAGAACGAGGAAGCTTTGACCTCGCACAAAGTTTACCACCGCACGATCGGTTACTTCGGCTGTATTTACTGTAAACGGAAATTCAACACGCTCACGCTTTATAGGAAACACAAGAACCATCACTTCTCTCAGTTGAACGTGGAAAATCCGACGAAGTGTGAGCACTGCGATGAGACGTTCGTCGCGTTCCGCGAGATGATCTACCACATGCGAGACGCGCACGGCGATGACAAGGAGTGGGTCGTGATGCCGAAGGCCTCCATCGAGGAGACATGCACGATATGCAACAAGAAGTTCTTCAACCTGCACAGACACTTGGAGTACCACGAAGAGAACAGGTGCAAGAAGTGCGGCGAGTACTACTTCTCCACCGTCGACTTTGACAACCACTTGTGCCCCGTCGAAAGTGACGATGAGAGCGAGCAGAATACCGAGAACAGCTTGAGGCCAGTGtacgaggagtgccggttctgCTTCAAACCAATCTCGTCCACAAGCTCCAAGGCGAAACACGATCATATCCACAAGACGTCCGGGTCGATATCGTGCCGGTTTTGCCCTCTCAAATTCAAGACCATGGACGCGTTCAATATTCACGCGTTCTCGCACAGAAGTAGAAAGTACAATAAGAGGCCGATCAAATGCAGGAAGTGCGGCGAGAAGTTCGTCAAGTACGGGCCGTTCATGAGGCACATGAAGTCGGTGCACAAGTCGGTGAAGAAGGTGCACTACCGCGCGCAGGTGCGGCCGGAGCGCTGCGTCGTGTGCGGCGACCAGTTCCCCAACCTGCACAACCACTACCGCGCGCATCTGCTGAACCGGTGCCAGCTGTGCGCCAAGTACTTCACCTCGGCGAAGCTGTTCGCGAAGCACCAGTGCGACAAGGAGGACGCCGACCCTACGAAAGTGTTCGTGTGCGATGAGAATCTCCAGGCGCTCATCAATACGTACGCGCCCAAGGACTTGAAGGACGACGAAAAATTCTACGGGTACAGTGACGAAGAGGATGAGGAGGTGAATGGTACGGTTGACGGTCAACCGCCAGCCGTCCGTGAAGAAAAACCAAATATTGTTGACGACGATAGTCAGAGCCAAACTGGCGACCAACACGATTCCATTACCTTGTCTGAAAATCAGGACGATGCTAGTCAAGATGAGAAAAATCTACATTTCATGGTGTCATCTCCGATCATATCGGATGTTTTGTCTCTCTACCAGCAAAAGGAAGACGATAAGAAAAGCGATAAAGATGTGGTCATACTGACTGACGACGATTCAATGGATATTGATATTAATGTACCAGTGATTACTATCGattaa
Protein Sequence: MALKLGKCRLCLKLGDFYSIFAVDNAVQLAEMVMDCARVKIYEGDGLPDKICSECVQKLSSAYIFKQQCERCDQELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDISNQTKPSSSNEAYPAPQCATPAHRSRKRSRSADNTSVSDRSHDYAPSSKRVSELRFSQKKKRATNYEADSDYEDDNSFSQYSGGTDSDEPLVKNKFKCQQCDRSFPTMKSRCAHMKVHSKAQSLGKNEVVNIPKKNVSEDATDEGEKLACEKCGKTFKLNIMLKRHQDLCGVQVEVAPQKELMIALEPIDAVPRYSSKNECEICTAKFKTVENLQKHLRVVHAAALKPDVSPSKQKTVSVPCIYCRKSFDDYYVYTAHFNSCNKKCELASFECPVCKRVMGKRAAYFVHVKNLHFEPRAPKAEAAEGRKESFECRMCNKLLPTQAQLITHLAAHMSKIDNMPNDMADDDSRASTIGDSASMGSEYSSPHVSSGPLKCTLCDKAFKYKKALETHHMKVHSTEVPVKIEPPDKDSSLLSETQDPEPSESESSQEEGDDNTCDICEKQFSYKRLLVHHKRTKHNVSSGTKRAKINLKECSVRCLICDLEMLVGAINEHNRKHIALGLKPRNVYACAACGDRFNSCAALAAHIRYAHRLHAPRAPPAPPAPRALRRGDDLADFCEVVVTKAEPLDPVQSHNDFGVVPSGSADAPAVDLAGFTCPMCGKTMPTLISLKRHVNWHSNVGNNLEKKVECFVCKETFRFKGHFKLHMRTHYRDPNLDPKHLTCGICHRRSKNLRAAQAHMNFHKQTRFQNKDYECSICKRVFQHRKVYLSHMAIHFKRGESLQNTIVGDVLPQTADKTIFDGTHTCSLCGKVCDSENSLKHHERWHKSKSSLFGARHECFVCQLVFTNKRRLEIHTRTHFEDENGPFKCTICGKGFIDENYFRRHVKGHNFDHQVHKDRIAKLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPPPDYYSCKLCAKVFLDVQRLQKHEEAHMRKPLFFKCKFCGKNTTSLKVHNIHIKSHLCQKYLDDPLKCQYCDEKFYKGYALHHHLLDVHQIRETWIAEKTEQTLNGPLKEFQCSVCLKVLASKGNFERHIDYHNTVRCNYCFIYFSTLRFLEGHLAFSCEKKKLIGETEIYPKKIKCQVCYKAFHLQVKLDCHLRTQHGIKVNREASFGKKETVCDYCFKVFENEEALTSHKVYHRTIGYFGCIYCKRKFNTLTLYRKHKNHHFSQLNVENPTKCEHCDETFVAFREMIYHMRDAHGDDKEWVVMPKASIEETCTICNKKFFNLHRHLEYHEENRCKKCGEYYFSTVDFDNHLCPVESDDESEQNTENSLRPVYEECRFCFKPISSTSSKAKHDHIHKTSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVKYGPFMRHMKSVHKSVKKVHYRAQVRPERCVVCGDQFPNLHNHYRAHLLNRCQLCAKYFTSAKLFAKHQCDKEDADPTKVFVCDENLQALINTYAPKDLKDDEKFYGYSDEEDEEVNGTVDGQPPAVREEKPNIVDDDSQSQTGDQHDSITLSENQDDASQDEKNLHFMVSSPIISDVLSLYQQKEDDKKSDKDVVILTDDDSMDIDINVPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -