Basic Information

Insect: Cydalima perspectalis
Gene Symbol: -
Assembly: GCA_951394215.1
Location: OX596229.1:3594339-3601023[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.02 1.5 9.9 6.6 1 23 42 64 42 64 0.98

2 35 0.00079 0.062 14.3 1.1 2 23 135 157 134 157 0.90

3 35 0.063 4.9 8.3 0.1 1 23 162 185 162 185 0.95

4 35 8.4 6.6e+02 1.6 0.1 3 23 273 294 271 294 0.91

5 35 0.00054 0.042 14.8 1.2 1 23 318 341 318 341 0.94

6 35 2 1.6e+02 3.6 0.4 3 23 350 370 349 370 0.83

7 35 9.6e-06 0.00075 20.3 0.4 2 23 375 397 374 397 0.93

8 35 1.8 1.4e+02 3.8 0.2 1 23 462 484 462 484 0.95

9 35 1.4 1.1e+02 4.0 0.8 2 17 512 527 511 534 0.77

10 35 0.13 10 7.3 1.1 2 23 556 578 555 578 0.94

11 35 1.6e-05 0.0012 19.6 3.8 1 23 583 605 583 606 0.96

12 35 0.0058 0.46 11.6 0.1 1 23 610 633 610 633 0.94

13 35 0.1 8.1 7.6 0.4 3 23 637 658 636 658 0.97

14 35 8.8 6.9e+02 1.6 0.0 2 19 668 685 667 687 0.92

15 35 0.0044 0.35 11.9 1.4 1 23 736 759 736 759 0.94

16 35 1.2 91 4.3 0.1 2 23 788 810 787 810 0.91

17 35 0.00014 0.011 16.7 0.1 3 23 862 883 860 883 0.93

18 35 0.0022 0.17 12.9 0.4 1 23 888 911 888 911 0.90

19 35 0.00051 0.04 14.9 0.7 2 23 917 939 917 939 0.93

20 35 0.0023 0.18 12.9 2.5 1 23 977 999 977 999 0.94

21 35 0.0033 0.26 12.3 0.0 2 23 1027 1049 1026 1049 0.96

22 35 0.013 1 10.5 0.3 3 23 1071 1092 1071 1092 0.94

23 35 0.0079 0.62 11.2 2.4 2 23 1098 1119 1097 1120 0.92

24 35 0.002 0.16 13.0 0.8 1 23 1125 1148 1125 1148 0.98

25 35 0.0038 0.3 12.2 1.0 2 23 1151 1173 1151 1173 0.95

26 35 8 6.2e+02 1.7 3.3 2 20 1180 1198 1179 1200 0.91

27 35 0.0085 0.66 11.1 1.8 1 23 1254 1277 1254 1277 0.95

28 35 0.95 74 4.6 0.2 2 23 1305 1327 1304 1327 0.94

29 35 1.5 1.2e+02 4.0 0.1 2 23 1350 1373 1349 1373 0.94

30 35 0.00037 0.029 15.3 0.1 3 23 1380 1401 1379 1401 0.94

31 35 0.086 6.7 7.9 6.4 2 23 1406 1428 1405 1428 0.94

32 35 0.0017 0.13 13.3 3.4 1 23 1433 1456 1433 1456 0.97

33 35 3.6e-05 0.0028 18.5 5.3 1 23 1460 1483 1460 1483 0.97

34 35 0.0037 0.29 12.2 0.1 2 23 1490 1511 1489 1511 0.96

35 35 0.00021 0.017 16.1 4.2 1 23 1517 1539 1517 1539 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.02	1.5	9.9	6.6	1	23	42	64	42	64	0.98
2	35	0.00079	0.062	14.3	1.1	2	23	135	157	134	157	0.90
3	35	0.063	4.9	8.3	0.1	1	23	162	185	162	185	0.95
4	35	8.4	6.6e+02	1.6	0.1	3	23	273	294	271	294	0.91
5	35	0.00054	0.042	14.8	1.2	1	23	318	341	318	341	0.94
6	35	2	1.6e+02	3.6	0.4	3	23	350	370	349	370	0.83
7	35	9.6e-06	0.00075	20.3	0.4	2	23	375	397	374	397	0.93
8	35	1.8	1.4e+02	3.8	0.2	1	23	462	484	462	484	0.95
9	35	1.4	1.1e+02	4.0	0.8	2	17	512	527	511	534	0.77
10	35	0.13	10	7.3	1.1	2	23	556	578	555	578	0.94
11	35	1.6e-05	0.0012	19.6	3.8	1	23	583	605	583	606	0.96
12	35	0.0058	0.46	11.6	0.1	1	23	610	633	610	633	0.94
13	35	0.1	8.1	7.6	0.4	3	23	637	658	636	658	0.97
14	35	8.8	6.9e+02	1.6	0.0	2	19	668	685	667	687	0.92
15	35	0.0044	0.35	11.9	1.4	1	23	736	759	736	759	0.94
16	35	1.2	91	4.3	0.1	2	23	788	810	787	810	0.91
17	35	0.00014	0.011	16.7	0.1	3	23	862	883	860	883	0.93
18	35	0.0022	0.17	12.9	0.4	1	23	888	911	888	911	0.90
19	35	0.00051	0.04	14.9	0.7	2	23	917	939	917	939	0.93
20	35	0.0023	0.18	12.9	2.5	1	23	977	999	977	999	0.94
21	35	0.0033	0.26	12.3	0.0	2	23	1027	1049	1026	1049	0.96
22	35	0.013	1	10.5	0.3	3	23	1071	1092	1071	1092	0.94
23	35	0.0079	0.62	11.2	2.4	2	23	1098	1119	1097	1120	0.92
24	35	0.002	0.16	13.0	0.8	1	23	1125	1148	1125	1148	0.98
25	35	0.0038	0.3	12.2	1.0	2	23	1151	1173	1151	1173	0.95
26	35	8	6.2e+02	1.7	3.3	2	20	1180	1198	1179	1200	0.91
27	35	0.0085	0.66	11.1	1.8	1	23	1254	1277	1254	1277	0.95
28	35	0.95	74	4.6	0.2	2	23	1305	1327	1304	1327	0.94
29	35	1.5	1.2e+02	4.0	0.1	2	23	1350	1373	1349	1373	0.94
30	35	0.00037	0.029	15.3	0.1	3	23	1380	1401	1379	1401	0.94
31	35	0.086	6.7	7.9	6.4	2	23	1406	1428	1405	1428	0.94
32	35	0.0017	0.13	13.3	3.4	1	23	1433	1456	1433	1456	0.97
33	35	3.6e-05	0.0028	18.5	5.3	1	23	1460	1483	1460	1483	0.97
34	35	0.0037	0.29	12.2	0.1	2	23	1490	1511	1489	1511	0.96
35	35	0.00021	0.017	16.1	4.2	1	23	1517	1539	1517	1539	0.97

Sequence Information

Coding Sequence: ATGAACAGTGAACGTCAGAAAAGCAAGAACCAATCCGTCGCGTTCACGGCGGCGCGCCGCCGCACCAACTTGCAGATTCTGTTGAATAACACGGGCATAATTCCGTTTAAGTGGAAGAATTTGTTCATGTGCTTCTACTGCGGGAAGCACACGACCGAATTCTCAGATCTGAGGAACCACACTCACACCCACGGGATGTGTACACTCAATGAGTATTCCGTTAGAAAACTGCGCGCGTCCCAAGTGGAAATTAAGCTGGACGTCTCCGACCTGTCGTGCAAGCTCTGCAGAGTGTGTTTCTTGAGTCTCGACGAGATTATCGACCACCTGATCAGCGAGCATGGGTCTAATTACGATAAGAGAGTCTGCATGTACATTCAGCAGTACAACCTGTCGAAGTCCACTTGTCCAGAGTGCTCAAAGAGCTTTGTCTACTCCTCGTTCCTGATAAACCACGTCGATGAATGCCACCCTATATGCTCTTTTCCGTGCGACAACTGTCCAGACCAGTTTAGCTCCCAGGAATACTTGGACGAACACTTAGCGTCTGTTCACGACGTATATAAACGGTTCTCTTCGGAGTCCAGATCGCCGTCCCCGCAACCTCACGATACGACATTGGATGGGGTCGTGAATCTCTTGAAAATGTCCAAtgcttttctttttaaatacgcgaACGGCCTTAAATGCTACTTTTGCTATAATAGTTTTGGCGATTTCAATGTGCTGCGTGAACACGTGGCTGAATATCATTCTGATGCTGATTTAAGTAAGATTGACTTAGATGACGTCAAGGTACTTATCGATGATCTCGCCTGCAGACAGTGTTCAAAGACGTTAGGAAATCTGGAATCTGCGATAGACCATTTGAGCTCGGCGCACGATGTTAACATAGACAAGGTCTCGTTGCAATACGTAAGCCCGTTTAAAATCGATGAAAGCTCGGAAAATTTTCAATGCCAACTATGCGATGAAACCTTTCCGTCATTTGCGCATTTATTGAAGCACGCGAAGGCAAAGCATATTTCTCCGTCGGCGTCGGCGCTTTGCCCGAAGTGCGGATTGAGTGTAAAACGCACTGCACTCAATAATCACTTTGTTAGGTATCATAAGAATGCGCAGGAATGTCCCACCTGCGGCAAAGAGTTCTCTACTAAGAACCAGTTGGCCAGACACGTGCAATTCATTCATAATGACTTATGGAATGACAGTGAAGATGATAGTGATGACACACATGTTAAAAAGAGAAAGAAGAATAAAGGACAACGCAAATTACATGAATATGTGCCGGGGACTGTGCACAATGCTAATAAAGTCAGGCGGAGGAACCTGGCAATATTGTTCAACAACACCACGGTCATACCGTTTAAGTGGCGTGGCAAATACATTTGCTTCTACTGCGGGGACGACGCGGACTCGTACCGAGAGCTCAGAGACCATACAAGGGCTCACGGCAACTGCTCCGTCCTAGATAGGGCCATCAGACTAGTCAGAGGCAAAGACTCTGAAGTCAAAATAGACATATCGGATATGACCTGCACGATTTGCAGCGAAACATTCAATCACTTCGACGATATACTCTTCCATTTGATCAGTAAACACAAACTCCAGTATAACAAAAACGTCGATTTAACTGTCGTCACCATATACAGGCTGGTCGATCTCAAATGTGTATTCTGCGACGATAGCTTCAACTACTTCAGCAAACTCATCAAACATGTTAATCTCAAACACCCCGTCAACTGTTTCACTTGCGATAACTGCGATCAGAAGTTCAACAAAAAGAGGGACTTGGAGTCACACATACGTACACATCACAGGTCTACGTATGTCTGTCCAAAATGCTTGCTGATCTTTCCCACGTACGCTGCGTTGCAGAAACACAAGTCTAACGCCCACGCCTCAGCCTGTAATGTATGTTTTGAACCGTTTTCGTCTGACGGAAAAAGGCTGAAACACATGAAAAAGGCACATCTTCTCGGAAACGATAGCGACAATTTACAATGCGGATTTTGCCTCAAAACTCTCGCGACTAAAATTGCATTCCTCAATCACGCGGCGCAATGTAACGTCAATGACACGTCGAAATTTTACAGCGAATCAGTTGACTCGGATAAGAAATCTAACGTCGTTCAGATAAGGAATAATATTGCGTGCATAGTAAACATGTCCACCGCACTgccttttaaatactttatgaaTAAATTTCGATGTTTTTACTGTCCGAAAGACTTTATTGAATGCGACGATTTGAAGGAACACACTGTTATGGAGCATCCTGTGTGCGATAGCAAGCTGAAGGCTATGAGGCTTCGCAATAGAGAGCATGGACTCAAAATAAAACTCGATATAGCTCTTCTGACTTGCAAACTATGTTTCAAGCCTATGGAAGACTTGGATACGTTAATTAACCATCTAATAGCGGAACATAATGCGCAATACGATAAGACGGTCGATAATAATGTCCAGCCGTTCAAGCTGGTTAAAGACAATTTCGCGTGTCCCTTTTGTTGCGAATGGTTCAGATACTTTAGCAGTCTTCTAAAGCACGTCAGTCAATCCcatacggataacagaatcattTGTGTATACTGTGGTAAAAGCTTCAGGACAGATCCCAGTCTTAGAGCCCATATATCACTCAGACACAAGCCTAATGGATACAAATGTAGTGTATGCGAACTAGATTTCACAACTAAAACGGCTTTGAGGGAACATTCGGGGAAAGCGCATGGCAGTAAAGTCGCCCAGTGCATGGAGTGTACGGAGAAGTTTACGTCACAATACTCGATGCAGAGGCACATGATTGACGTGCACGATGAAAAAGCACGGGCCCCTTACGAAGGCTGCGCCTCAGAGCGCCGGAGAAAGAACTTGAAAATACTTTTCAACTACACCTCAATAATACCTTTTAAATGGCGAGGCCGGTTTCTTTGTTTCTACTGCCCCAAAAATTTCACAGACTACACAGAGTTCAAAAGCCATACAAAAGAGCACGGCACTTGCACCACCAAAGATTATTCTTTGCGAGCTATCAAAGGCAGTCACGTTGAAATTAAGATTGACGTGTCAGAAGTTGTTTGTCAGATTTGTACGGAGCCTTTTAGCGATTGGTCGGAGATCGTGGACCATTTGACGACGAAACACGAGATGGAGTATGACAAGACAGTAGAAGTGCCTCTCCAGGCGTATAGGCTGTCAGATATGGGGTGTCTGTTCTGTGGGGAGCGATTCAGTTATTTCGGGAACTTGATCAGCCACGTCAATGCGACTCATCCGCAGAACAAATTGATCTGTGACGATTGCGGGGTCTCTTTCAACAAGAAGAGGGATTTAGCTGTCCATTGTAGATACCACCATCGCAAAGGCGGGTATCCATGCGAACAGTGCGCTCAGACGTTCGAAAACTTCTACACTTTACGTTCGCACAAAAACACGGCTCACTTTAGGAAATGTTCGAGCTGTAATCTTCGTTTTAGCACCATGACCCTCTTGCAGAAGCATATTTTGTTAGAGCACCCAGATAATGGAAACTTGACGTGCGAATATTGCTCCAAGCTCTGTCACACTCTTCAAGGTTTGCGACAGCATAAAAGCAAGTGTAGAGTCAAGATGATTTGCACAACGGACGACGCAGATTCATCGTTAGCTATCTATAACGTTCAGCCTACGAAAAGACAAAACATTAAACAGATTAGGCAgaatatacaatgcatattAAATATGTCGACCGCGGTACCTTTCAAGTTCTTCTCAAAGTACTCCTGTTTTTATTGCTCGAAGAAATTCTTTGAGTTCGATGATCTTAAGCAGCATACTGCGGTGGAGCATCCAGTATGCGATCTTGAGTCTAAATATATGAGGAAATGCAAAGGAGAACGCATTAATGTGAAAATAGATGTATCTTGTTTAACGTGCAAAATTTGCCACCAACCTATGGACGAATTGAGCACTCTCATTGATCATTTGATCTCTGAACACAAGGCGAATTACGATAAGTCGGCAGCTAGGTGTTTAGACCCGTACAAGGTTATAAAAGACAACATCCCCTGTCCGATGTGTCCGGACCGGACGTTCAGATATTTCGGGATCTTGCTTCGGCACATAAATTCCGATCatagcaataataataagatctgTGATTTTTGCGGTCGTGCTTTTAGGAATGTTGTTAATCTAAATGTTCATATATCGTACGCCCACGCTGGTACGTGTACGTGCGATGTTTGCGGTATGAAATGTAAGAACCAGTGGTGTCTCGCAAGGCACCGTGCTAAGACCCATGATGCAAAAGACTATAAATGTCCCAAATGCCCTGAACAGTTTCAGTCTCAATACCACAAGCAGAAGCATTTGATCAAAATGCATGATGTGGGTCACAAGTGCGTGCACTGTGGGAAGATGTTCACACGAAATTCTTTCATGAAAGACCACATACGGAGAATACATTTGAAGGAGAAGAATGTGCCGTGTCCGCTCTGCGCTGAAAGGTTCTTTGATAACTATCTCCTTAAGATGCATATGGTGAAACATGAAGGAGAGAGGAGGTTCTGTTGCACTGTGTGCGGGAAGGCATTCCTGCGCAGGAGCAACCTTCATTCCCACATGGAAATGCATAAGAAGTACGGACACGCGGGAGGGACGATACAGGATATTATGAATTAG
Protein Sequence: MNSERQKSKNQSVAFTAARRRTNLQILLNNTGIIPFKWKNLFMCFYCGKHTTEFSDLRNHTHTHGMCTLNEYSVRKLRASQVEIKLDVSDLSCKLCRVCFLSLDEIIDHLISEHGSNYDKRVCMYIQQYNLSKSTCPECSKSFVYSSFLINHVDECHPICSFPCDNCPDQFSSQEYLDEHLASVHDVYKRFSSESRSPSPQPHDTTLDGVVNLLKMSNAFLFKYANGLKCYFCYNSFGDFNVLREHVAEYHSDADLSKIDLDDVKVLIDDLACRQCSKTLGNLESAIDHLSSAHDVNIDKVSLQYVSPFKIDESSENFQCQLCDETFPSFAHLLKHAKAKHISPSASALCPKCGLSVKRTALNNHFVRYHKNAQECPTCGKEFSTKNQLARHVQFIHNDLWNDSEDDSDDTHVKKRKKNKGQRKLHEYVPGTVHNANKVRRRNLAILFNNTTVIPFKWRGKYICFYCGDDADSYRELRDHTRAHGNCSVLDRAIRLVRGKDSEVKIDISDMTCTICSETFNHFDDILFHLISKHKLQYNKNVDLTVVTIYRLVDLKCVFCDDSFNYFSKLIKHVNLKHPVNCFTCDNCDQKFNKKRDLESHIRTHHRSTYVCPKCLLIFPTYAALQKHKSNAHASACNVCFEPFSSDGKRLKHMKKAHLLGNDSDNLQCGFCLKTLATKIAFLNHAAQCNVNDTSKFYSESVDSDKKSNVVQIRNNIACIVNMSTALPFKYFMNKFRCFYCPKDFIECDDLKEHTVMEHPVCDSKLKAMRLRNREHGLKIKLDIALLTCKLCFKPMEDLDTLINHLIAEHNAQYDKTVDNNVQPFKLVKDNFACPFCCEWFRYFSSLLKHVSQSHTDNRIICVYCGKSFRTDPSLRAHISLRHKPNGYKCSVCELDFTTKTALREHSGKAHGSKVAQCMECTEKFTSQYSMQRHMIDVHDEKARAPYEGCASERRRKNLKILFNYTSIIPFKWRGRFLCFYCPKNFTDYTEFKSHTKEHGTCTTKDYSLRAIKGSHVEIKIDVSEVVCQICTEPFSDWSEIVDHLTTKHEMEYDKTVEVPLQAYRLSDMGCLFCGERFSYFGNLISHVNATHPQNKLICDDCGVSFNKKRDLAVHCRYHHRKGGYPCEQCAQTFENFYTLRSHKNTAHFRKCSSCNLRFSTMTLLQKHILLEHPDNGNLTCEYCSKLCHTLQGLRQHKSKCRVKMICTTDDADSSLAIYNVQPTKRQNIKQIRQNIQCILNMSTAVPFKFFSKYSCFYCSKKFFEFDDLKQHTAVEHPVCDLESKYMRKCKGERINVKIDVSCLTCKICHQPMDELSTLIDHLISEHKANYDKSAARCLDPYKVIKDNIPCPMCPDRTFRYFGILLRHINSDHSNNNKICDFCGRAFRNVVNLNVHISYAHAGTCTCDVCGMKCKNQWCLARHRAKTHDAKDYKCPKCPEQFQSQYHKQKHLIKMHDVGHKCVHCGKMFTRNSFMKDHIRRIHLKEKNVPCPLCAERFFDNYLLKMHMVKHEGERRFCCTVCGKAFLRRSNLHSHMEMHKKYGHAGGTIQDIMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -