Cper018517.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_951394215.1
- Location
- OX596222.1:6494333-6499790[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.19 2.7e+02 2.3 0.0 22 33 228 239 224 244 0.86 2 5 4.4e-10 6.3e-07 29.9 0.1 1 45 259 304 259 305 0.93 3 5 2.9e-10 4.2e-07 30.5 0.4 3 46 313 360 311 360 0.94 4 5 2.6e-10 3.8e-07 30.6 0.0 1 43 364 406 364 408 0.97 5 5 4.7e-08 6.8e-05 23.4 0.0 3 45 416 460 414 461 0.93
Sequence Information
- Coding Sequence
- ATGGACATGGACAGTGATGAAGACACTGAGAAGGAGATGGAGGATTTGGAACAGCTGAATGCTGTTTTAGAGGAAGCTGAAGGGGAAAACATATCACCATCTTGTGCTACTTCCAAATGTTCAGTTCAGGCCTCCTCCAGCTGTGTCCTCGGCTCCACAAGTAATGTCGAAGAATATTCTAGGATAGAAACTGCATTAGCTCTCAATAAACTGACGGATTTGAAACTTCAAAGGCTTGAAACGGTACTCAATGAGCGTTTACGACAGTGCCGAAAGAAGATCAAGGAGAATCAAACTTGGGATGTAGTTAACGAAAAGAGGATGGAAAAGTTCCGATACTTAAATTGCGGTAAACCATATTTCAAGGATGCCAACAATTTTCCCGCTCCTGACAACTGCGACACTATTTTGATGGCCAAGTCAGAGATGTATGATTTCTCGACAGTCGCATCCGTGCCTGGGTGGACTGTTAAAGATAAAAGCGAATTCGTTTCTTCCATGCTGCAGATGTCCAaagaaatcagaatcaaagaaataaattcaaaaatggCAAAGATTCGCCGTGATACAACCATTAAAGGATCTAAGCGGAACAAAGCATTGGATGCTTGTCAAAAAGAACTGAATAGCATAGGCAAAAAGACTCTTAGGTATTTAGCACTGCCTGTTGATCAGGAGTATGACTGGGATACTATAGCCAATAAATTAAATCGCAGACACAGTCCGCTTGAATACCGAGCACTCTGGAAACTTTTCTTGCATCCCAGCATTAATAAAGACAGTTGGAGCAAAACTGAACATGCACTGTTACAGCAACTGGCACATGATAATCTACAAGATTGGGATAAAATTGCTAAGGAATTAAACACTAATCGGACCGGCTATCAGTGTTTTGTTTACTTCCGAACAAATATGAGCAACACATTTACAGGGTCAAAATGGACTAAAGAAGAGGAGGAATATCTGAAAAGACTCattgaatattataaagaagacaaTTACATACCTTGGGGTAGAGTGGCCGCATCAATGGAAAATAGAACTAAAatccaaatttacaataaatatatgagACTTTTAGAGTTGAGGAAAGGCAGGTTTCTGCCTGAAGAAGATGCTGTCATTCTGAACTGTGTCGCTCATTATGGACTGGactttagaaaaattaaaacttttctaCCAGGACGTTCACATGTCCAATTACGAACACGCTATCAGCTTTTGTCAACGAAGACTTTGTCAACTGTTTGGACTATATCAGAAGACAGAGAGTTGATTCAGTTAATAGCCAATCAAGATTCATCAACAAACTATTccagtatatgtaaatatttcccGGGTAAAGATCGATCTCATATTAGATCAAGGCATCTTACACTGCTAAAGTGGTTGAAACGGAATCCCAATGTTGATATAGCTCGAGCACCAAGACGTGGCGCTAGGCGATTGTGTCATGGACAAGCTATGGCAAACATAAACAAAGctgtagaaaaattaaaaactagaaTGCAAACAGAACTTGATAGTAAAATACCTAAAAGGATCACTAAAGATTCCCCTGAAGAGGACATAGAAGATGCAATTGTGGCCCTACTGGTCACGGAACAGATTAAGGAGGAAGATAATAAAGATGCCCTTTCCAATAACATGTTGAAACTAGACGATGAAACAAAGCAGATCATTACAATAGTTCATATAAGGAAAGATATCGCCACAGACAATTGCATCATTGGCCAGCTGGTCAGCCTTCTCATTTCCTAA
- Protein Sequence
- MDMDSDEDTEKEMEDLEQLNAVLEEAEGENISPSCATSKCSVQASSSCVLGSTSNVEEYSRIETALALNKLTDLKLQRLETVLNERLRQCRKKIKENQTWDVVNEKRMEKFRYLNCGKPYFKDANNFPAPDNCDTILMAKSEMYDFSTVASVPGWTVKDKSEFVSSMLQMSKEIRIKEINSKMAKIRRDTTIKGSKRNKALDACQKELNSIGKKTLRYLALPVDQEYDWDTIANKLNRRHSPLEYRALWKLFLHPSINKDSWSKTEHALLQQLAHDNLQDWDKIAKELNTNRTGYQCFVYFRTNMSNTFTGSKWTKEEEEYLKRLIEYYKEDNYIPWGRVAASMENRTKIQIYNKYMRLLELRKGRFLPEEDAVILNCVAHYGLDFRKIKTFLPGRSHVQLRTRYQLLSTKTLSTVWTISEDRELIQLIANQDSSTNYSSICKYFPGKDRSHIRSRHLTLLKWLKRNPNVDIARAPRRGARRLCHGQAMANINKAVEKLKTRMQTELDSKIPKRITKDSPEEDIEDAIVALLVTEQIKEEDNKDALSNNMLKLDDETKQIITIVHIRKDIATDNCIIGQLVSLLIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -