Cper015418.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- retn
- Assembly
- GCA_951394215.1
- Location
- OX596217.1:9924684-9935573[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-20 3.8e-17 63.0 0.0 16 89 30 101 22 101 0.94 2 2 3.6 1e+04 -2.5 0.0 25 38 234 247 195 248 0.58
Sequence Information
- Coding Sequence
- ATGGGCTGCCGGCATTCGCCAGCGCTCGCCTCCCATTGGCCGGCCGCGGGGTTGCGGCCGCAAAGGGCCTTGATACAACTCTCGATAAGAGGAACTCCAATAAACCGGCTGCCGATCATGGCCAAGTCTGTTCTTGACCTATACGAGCTGTACAACCTGGTGATTGCCCGCGGCGGTCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCCTCAATCACGTCTGCCGCGTTCACCTTACGTACACAATACATGAAGTACTTGTATGACTACGAGTGTGAGAAGAAGAACCTGTCTACTCGGAGCGAGCTAGACGCAGCCATTGAGGGCAACAAGAGGGAGGGCAGGCGCGCCTCCGGCCAGTACGATGCGCAAGCGGCGCTTGCTATGCCGCCCCTTAGCCGCGGCGTGCCGGCGTCGCTTGCGCAGCTCTCGCAGCACATGCAGCCGCTGTCGCTCTCGCTGGGCGGCAGCGTGGGGGGCGTCCCTCGGCTGCCACCGCtgccgccgcacgcgccgcacatCTCGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATTCAGCAGCAGCGGGAGATGATGAGGAACGGGTCCGAATCGCCCCCAGGCTCAAATGGGCCGGCGCCCATCATGTCTCCGCGCGACGCGGCCGCACTCAGTGCCATCGACGTATCCCGGCTGACGCTGTGGTCGCtgtacaacaacaacaacaacagcccGCAACCAGACCTGGAGCCACAACGCACAGGAGACCAGCAATTGGTCGTGTCGATAGAACTCAACGGTGTCACATACGAAGGCGTTCTGTTCCCATCACAGAATGGCAACGGACAGAACGGCCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MGCRHSPALASHWPAAGLRPQRALIQLSIRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGSVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQREMMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQRTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -