Basic Information

Insect: Cyclophora punctaria
Gene Symbol: -
Assembly: GCA_951394245.1
Location: OX596181.1:2646881-2654354[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.031 2.3 9.2 2.4 3 19 561 577 560 582 0.91

2 7 0.00023 0.017 15.9 0.7 3 23 602 622 601 622 0.99

3 7 2.5e-05 0.0019 19.0 1.1 2 23 634 655 633 655 0.98

4 7 1.2e-05 0.00086 20.0 1.7 1 23 665 687 665 687 0.97

5 7 3.9e-05 0.0029 18.4 0.5 2 23 694 715 693 715 0.96

6 7 3 2.2e+02 3.0 3.9 3 23 723 744 721 744 0.95

7 7 0.00019 0.014 16.2 1.0 1 21 750 770 750 771 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.031	2.3	9.2	2.4	3	19	561	577	560	582	0.91
2	7	0.00023	0.017	15.9	0.7	3	23	602	622	601	622	0.99
3	7	2.5e-05	0.0019	19.0	1.1	2	23	634	655	633	655	0.98
4	7	1.2e-05	0.00086	20.0	1.7	1	23	665	687	665	687	0.97
5	7	3.9e-05	0.0029	18.4	0.5	2	23	694	715	693	715	0.96
6	7	3	2.2e+02	3.0	3.9	3	23	723	744	721	744	0.95
7	7	0.00019	0.014	16.2	1.0	1	21	750	770	750	771	0.94

Sequence Information

Coding Sequence: ATGGAAGGCTTATGTAGAGGATGTTTACAAAAATTTCATGAGCCTACAGACCTTACACCGTACAACGAAAAGAATAGGAGATTGTTCGTTTACTCCACCGGTTTGCAGGTGAAAAAGACAGATACGTTCACATTCCAACTATGCAAAGATTGTTATTTGAACTTGAAGCAGGCTTGCAAGTTCAAGAAACAATGTCGCACGTCGGACAAGAAGTTCAAGAGCTATATGACGTTAAGGGAATATGGAGATAACTTGGATTTTGAGACGTTTCTGAAGAACAATGAGGAGTCTTTGATGTTGAGAATTCCTTTACCAAGCGGCAACAGCACTCCGGCACATCAGAAGCAAAAAGATGATGACAATGACTCCACATGCACAAGTATCCGTAACTTCATGTCAGACATACTCCAAGGAGAAGAGGTACCTCCCACTGAGGCTCGCATCATTAGAGAGCTGATTGAGGAGGAAGCAGACGTGCTGGATGACTCGTTGGACAGTCACTGGCTGCAGGATGATATGTCTATAGATACCGACTTTAGGATGGACTTTGGTTTCAGCCCATTTTCGACTCCACGCTCAGTTAATTACGACCACTGCTACACTCCCAGAAAACTAGAAGATGAAAAGCAACACAAATACTTATCACCTAACAAACATCATTCCTTCGATATGCCTATCCTTGATATGGAAACCGATATCCAAGAAAATATAGAACAATGTAACGAAAATAACGAAGAAGTAACTCAAAATGATAAggaaaattttataatagaaGATCAGGAGAATGATACAGAATTGTATGCAAATATCACTGATATGGAAGTAATAACAGATCACTTTATAACGGATAACGGTATGGTAATGGAAAATAACGATAACTTTGTATCCAGTACCACTAATATAACAGATGAAAATAACGCTGACTTTATACCAAGTATTTGTAATGTTACGGTAAATAACGATAACGTTATACCAAGCAAAGGAAAATTAAAAGGAAATAACTATTTAACTACAGCTAAAATTCTAGATATTAACGAACAAATTTCAGAGTTCGTAGCCCcgactacaaacgaaaatgaTCTTTATGCAGTACAAAATAAGATGGAAATTTCGCCATTAAACGACttagaatattatattaataaagctGAGGTTAAAAAGAATGAGAGAGAGAAAGATAGGATATGTACAATTGATAAGAATTTGGAACGGGCTCTAGAAAATGTTGAGAATAAGGAATATGCGCTTGAACAGTTGCTGGCTTCTCCTAGAGTAATCATCAGATCCGGTGCCTCAACGCCTACAATCAAAAACATACTCTTTGGAGACCTCGATACAGATTCACAAACATTCGGAACAACGATTGAAAAGTACCAAAATGTCGAAGgacaaaacaacattttggACGACTTTTTAAAGGATTCTATCACAGTCACAAACAAAACGTTCCCACTGATCGAAGAAGAAAGTCCTACACAAAATGAtgtccaaaataaaaatactataaaactTATAGATATAGAGGAGAATGAACCTGATATAAATCAAGAATCAATTTTagatacattattaaaaacagctgatgaaaatattaaaatggaaCCAATTGAATTTGATGATAGCTTGTTCAAAAGACCATTCTCACCTCCTTACGACAAATATGATTTAGATAAATTACTTTGTAATATTTGCAACTCAACATTTTCAACGAAAAGAGGTCTCAAAGTACATTGTGCTAAATTGCACAATATAGTGGTAAATTATGAAacatcatataaaaataaatatacagaaGACTTGCTTTGCAAAATTTGTGGTAAGATTTATAAAGGGATTACTACACTGAACAATCATTTGCGGAAACATGAGGATGAGAAGAAAAACGATAATACTCCAGTGAAATGTGACACATGTCAGCTGATATTTTCAACGCAAGCGTCCCtcaataaacataaaagaaTGCACAATACAgattataaaactataaagAGACATGTGTGCAGTATTTGTGGGAAAACATTTTCTTCATTAGGCAATCGAAAAGTACACGAGAGACGGCATACAAAGGATTACAGACTCCATTGTAAAGTCTGCGGGTTGGGATTCTATAGGAATGCTGATTTGGATGTACATATGAGAAGCCACACCAACGAAAAGCCGCTTGCGTGTCATTATTGTTGTTACTCGGCGAAGCGGCAACTTGTGTTGAACAATCACATCCGGAGACGACATTTAGatCTACTAAATTACAGCTGCGATGTCTGCAAGGCCAGGTTCATATCAAAATCTGATTTACGGAAACATTTCAAAAGAAAATGCGAGCCAAGAATTAGGATCGTTATATCTAAAGCGAAAATAAGGGAAGCTGTATCGCTAAAGAATTGTGAAGAAGAACATGAAACTTCAGATATAGAAAGTACAGAATCCTTTGTACAAAATGAgccataa
Protein Sequence: MEGLCRGCLQKFHEPTDLTPYNEKNRRLFVYSTGLQVKKTDTFTFQLCKDCYLNLKQACKFKKQCRTSDKKFKSYMTLREYGDNLDFETFLKNNEESLMLRIPLPSGNSTPAHQKQKDDDNDSTCTSIRNFMSDILQGEEVPPTEARIIRELIEEEADVLDDSLDSHWLQDDMSIDTDFRMDFGFSPFSTPRSVNYDHCYTPRKLEDEKQHKYLSPNKHHSFDMPILDMETDIQENIEQCNENNEEVTQNDKENFIIEDQENDTELYANITDMEVITDHFITDNGMVMENNDNFVSSTTNITDENNADFIPSICNVTVNNDNVIPSKGKLKGNNYLTTAKILDINEQISEFVAPTTNENDLYAVQNKMEISPLNDLEYYINKAEVKKNEREKDRICTIDKNLERALENVENKEYALEQLLASPRVIIRSGASTPTIKNILFGDLDTDSQTFGTTIEKYQNVEGQNNILDDFLKDSITVTNKTFPLIEEESPTQNDVQNKNTIKLIDIEENEPDINQESILDTLLKTADENIKMEPIEFDDSLFKRPFSPPYDKYDLDKLLCNICNSTFSTKRGLKVHCAKLHNIVVNYETSYKNKYTEDLLCKICGKIYKGITTLNNHLRKHEDEKKNDNTPVKCDTCQLIFSTQASLNKHKRMHNTDYKTIKRHVCSICGKTFSSLGNRKVHERRHTKDYRLHCKVCGLGFYRNADLDVHMRSHTNEKPLACHYCCYSAKRQLVLNNHIRRRHLDLLNYSCDVCKARFISKSDLRKHFKRKCEPRIRIVISKAKIREAVSLKNCEEEHETSDIESTESFVQNEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407115;
90% Identity: -
80% Identity: -