Basic Information

Insect: Cyclophora punctaria
Gene Symbol: RREB1
Assembly: GCA_951394245.1
Location: OX596192.1:3627522-3632289[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.038 2.8 9.0 4.2 1 23 53 76 53 76 0.96

2 12 0.15 11 7.1 0.8 1 22 106 127 106 127 0.94

3 12 0.019 1.4 9.9 0.1 1 23 254 276 254 276 0.97

4 12 0.001 0.075 13.9 0.4 1 23 285 307 285 307 0.99

5 12 0.00062 0.046 14.6 2.0 1 23 313 336 313 336 0.97

6 12 0.0025 0.19 12.7 1.6 1 23 681 704 681 704 0.96

7 12 0.00021 0.016 16.1 1.3 2 23 898 919 897 919 0.97

8 12 0.021 1.6 9.7 5.3 1 23 925 948 925 948 0.97

9 12 0.027 2 9.4 1.4 1 23 979 1003 979 1003 0.93

10 12 0.22 17 6.5 0.1 1 23 1026 1049 1026 1049 0.89

11 12 0.0015 0.11 13.3 0.2 2 23 1089 1110 1088 1110 0.96

12 12 0.024 1.8 9.6 5.3 1 23 1116 1138 1116 1138 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.038	2.8	9.0	4.2	1	23	53	76	53	76	0.96
2	12	0.15	11	7.1	0.8	1	22	106	127	106	127	0.94
3	12	0.019	1.4	9.9	0.1	1	23	254	276	254	276	0.97
4	12	0.001	0.075	13.9	0.4	1	23	285	307	285	307	0.99
5	12	0.00062	0.046	14.6	2.0	1	23	313	336	313	336	0.97
6	12	0.0025	0.19	12.7	1.6	1	23	681	704	681	704	0.96
7	12	0.00021	0.016	16.1	1.3	2	23	898	919	897	919	0.97
8	12	0.021	1.6	9.7	5.3	1	23	925	948	925	948	0.97
9	12	0.027	2	9.4	1.4	1	23	979	1003	979	1003	0.93
10	12	0.22	17	6.5	0.1	1	23	1026	1049	1026	1049	0.89
11	12	0.0015	0.11	13.3	0.2	2	23	1089	1110	1088	1110	0.96
12	12	0.024	1.8	9.6	5.3	1	23	1116	1138	1116	1138	0.97

Sequence Information

Coding Sequence: ATGAAGGTGGAACCGGAGTTCAGAGGAACCAGGACCATGAGCATAGACAGCGACAACCGGTCGGACAGGAGCGAGGAGGAGGACCATAGACGAGCGCGGAAGCGAGCCGCGTCGACCTCCCCCTCCCCTCTCCCTCTAGACAAGAGAACAGCCCGCTTTGAATGCCACAAATGCCACGAGAGGTTCGACACAGCCAACGCGTACGACGTCCATCGCTTCACAACCCACGGCGATGAATCGCGATCAGGCTACGATGAACTCGTCGACTTCTCGAACAAAAAGTTCCCGGACATCAGTCGGGGGTTGGACCGCCTTTTCAGATGTGACTTCTGTACGAGAGACTTCCCTAACGCTCACGTCTTAGACCTGCATAGGAAGACCTGCAGTCCGACCAACAGAATACCCACCCCTGAAAGAGAGAGAAGAGAAGACTTCTTCGCCAAGCTCGATCTGACGAATAGAGCGTTCGGTATCCCCGGTACCCTAACCCCGCCCATGGAACGCTTCCCGCCCAAGTTCGACGATGGACATATCGGCAACGGAATCAGACATATTGACGCTGCTCGAGACTTGGCCGATATACAATCGATACTCAACGTCACGTCCACTGGCAGCCTTCTAGAGAGACTCACTGGTACTAGGGTTGCGCTAGAAAGTTCCATCCTGACCCCACCTGATACAATCGGTAAGGAAAGAGAGCCGGAAGAAACTCAGGATAACTTTGCAGCGGAGTTTAGAAGGATGAAGCTTCGTGGGGAGTTTCCGTGCCGATTGTGTCCCGCCAAGTTTCCTAATCTTCGGGCCCTGAAAGGACATAACAGGGTCCACTTAAGCGGAACTGGTCCCGGCCCTTATCAATGCAACATGTGTCCCCATGCATCTTTAGACAAGGCAGCGTTGGTGAGACATATGCGAACGCACAACGGCGACCGCCCTTACGAATGCGCGGTCTGCAACTACGCTTTCACTACCAAAGCTAACTGTGAAAGACATTTGAGAAATAGACACGCTAAAGTTACACGAGAAGACGTAAAGCGGTCTATTATTTACCACCCGTCAGAAGACCCTAATAATGATGAGGTCAATTCTAAACTGGCCCGTGATGAAGTGAAAAGGTCTTTGGCGTTCCATACTCCTGCTGACATCGACAGGAGGAATGAAAGCACTGGTCGTGACACTCCTTTAACTCACTTCACTCCGAGCTTCATCACCGAAAGACATCCAGTAGCTTCACTCGCAGCCAAACCCATATCAGAAGTGCCTTTACCCCCGCGCGAGCCCGAGCAGATTACGCCGAAAATTAAGGTGAAGGGAATAGGACAGCTCACACAGATTCCCGAGTTCAGACTGCCAGAGATTTCGTACAAGACCAACGAAGTCCAGACGGAGAGTTATGATGAGGAGTCTCCGGTGGACCTGAGCACGAGTGACAATAACAACTGTGATGTGCTTGATCTGAGCAAGAAAAAACGCGATAGTGACAGCGATGAGCCCAAAGCCCCGCTGCGTCCTTCGTTTGAGCCCGACCCAGCTTCTGTCGCCGCATCTGCCTTCGAAAAGACAAGATTCCTCGCCTTAGCCCAGCAAAGACTTTTCGAAAACTCTCTACCAAAGATAGACCCAGCTTACTACGCTACTCAGCTGTCGCAGCTGTACGCTGGAGCAGTCCCAGGGCTGCCCAGCCTCCCTCTACCACCTTCCTTTCCATACTTTCTCCAACCTTCGTTTTTTCCGCATCCAACCGACTCCCAGGAACTGGCGGAGATAAAGCAACGTATTCAGAAGGAGATCATCCGTGGACTCAGCATGTCTGGTGGAAGATTGGTAGATGATCAACAGGCTCAGCCAAAGGTAGAGCCGGAACTTGAAGAAGAGAAGCCAATCCCTCAGGTTATTTCACCAGCTCCATCTCCGATCCCTGAATCTCCTCACCCGATCACTAACAACGTGATGCCTCAATCAGACTCTGTGAAGATGGTCATAAAGAATGGTATTCTGATGCCGAAGCAGAAGCAAAGACGCTACCGTACTGAGAGACCGTTTTCCTGCTCGCAATGCTCAGCTCGCTTCACTCTTCGTTCGAACATGGAACGTCACGTGAAACAGCAACACCCTCAGCACTGGAGCGTCCGGCGTCCTTCCCCGAGGGCTCCTCCTCCATACCCAACTTCAGACTCCTTGGCCGACCGCGTGAAGTTCGCGCTATTGGCGCGTCACCTCGAGCGTCCGTTACACCAATCAGAGCGCTCCCCAATCCGCCGCGATTCAGACGAAGTCGCTGACAACGAAGAAGATGAAGATGATACTTTAGTTATTGATGAAGAACCAGAAGACCAGAAGCCTGAAGAACATTCTGGTGCTAAACGAGCAGCTGCTGAGATCCTCATGGCTTCGTGTCAACAGGAACTTAACAAGGACTTTGACTTGAAAATTGCTGGCAACCTGATTAACAAGCCGATTCCTATCGTTGCTGATAAACATGACAATGGAACTGAGCCGATGTCGCTGACGGTACAGGATCCGCTGCCGATCCCTGTGGTGCCTCGCAGTGATGAAGAGGAAGACGAAGAAGGGCTGGTGGCTTCTACAAGCGAGGGGAATAACTCTGGAAGCGatgaaaataaGTCTGAATCCGACTCAACTCAACCACCGAAAAAGAAGTCGGCCTACAGCCTGGCCCCGAACCGCGTCTCCTGCCCCTACTGCCACCGCAAGTTCCCGTGGTCCTCCTCTCTCCGCCGCCACGTCTTGACCCACACCGGCCAGAAGCCCTTCAAATGCCCCCACTGCCCTCTACTCTTCACAACCAAGTCCAACTGCGACCGCCATCTGTTGAGAAAACATGGCGGATCAGCCAGAGCTATACTAGCTGAGCCTATCAACGATACTCCAGCGCCACCAGCCAATGACTTAAGGACAGTCCCAGAAAGGCCTTTCAAGTGCGCTACTTGCCCTACCAGCACATTCTCTTCTTTGGAAACCTTGAAGAAGCACATGTCTTCGAGACATGGCTCGGATTCCCAGCCTGGGTCTCCTAACCCTGAAAATCATGAGGATAATGCTGAAGGTCTGGTGTTTAAGTGCCATTTGTGTGAGGCTTCGTTCGGGGAGCGCAGTGGGGCGTTGAATCACCTGGCTGCAGCTCATGCTTCGGAGTATGAACAGCTGGTGAGCAAGGGCGCGCTGGACGCGGCGAGTGACCGCAGCGAGAGCGCTGATGACGACGAGAGGGGAAAGTTTCCGGATCATGCTAACAGAAAGGTGGTATGCGCGTTCTGCGTGCGTCGCTTCTGGTCGGCGGAGGACCTGCGCCGCCACATGCGCACGCACTCCGGCGAGCGGCCCTTCGCCTGCGACCTGTGCCGCCGCCGCTTCACCCTCAAGCACAGCATGCTGCGCCACCGCAAGAAGCATCGTGAAGAAGTCACTGATGATGAAGACGCCTCGCCTCCTACTACTCCCGATGAGAAGGTCAATGGATACCGTTACCAAGACGATGACTCCGGCAACGAGATCCCGAGCAACGTAAACAACAACAACTCGCCGCCAGCCGCGCCCTTCGACAAGAAGATCAAACTCGACATGACCTCAAGGAAATACTCCTCAGAAGCCGAAACAGACATAGACAACGGATCAGACCTCATCGGGAAACTTCTAGGAATACCAGACAAGACCATAAACAAGCTACTCTCCTCCGCCGATGAAGCAGCCAAGATATTGGGCGTAAATAAATGA
Protein Sequence: MKVEPEFRGTRTMSIDSDNRSDRSEEEDHRRARKRAASTSPSPLPLDKRTARFECHKCHERFDTANAYDVHRFTTHGDESRSGYDELVDFSNKKFPDISRGLDRLFRCDFCTRDFPNAHVLDLHRKTCSPTNRIPTPERERREDFFAKLDLTNRAFGIPGTLTPPMERFPPKFDDGHIGNGIRHIDAARDLADIQSILNVTSTGSLLERLTGTRVALESSILTPPDTIGKEREPEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPADIDRRNESTGRDTPLTHFTPSFITERHPVASLAAKPISEVPLPPREPEQITPKIKVKGIGQLTQIPEFRLPEISYKTNEVQTESYDEESPVDLSTSDNNNCDVLDLSKKKRDSDSDEPKAPLRPSFEPDPASVAASAFEKTRFLALAQQRLFENSLPKIDPAYYATQLSQLYAGAVPGLPSLPLPPSFPYFLQPSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVDDQQAQPKVEPELEEEKPIPQVISPAPSPIPESPHPITNNVMPQSDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPSPRAPPPYPTSDSLADRVKFALLARHLERPLHQSERSPIRRDSDEVADNEEDEDDTLVIDEEPEDQKPEEHSGAKRAAAEILMASCQQELNKDFDLKIAGNLINKPIPIVADKHDNGTEPMSLTVQDPLPIPVVPRSDEEEDEEGLVASTSEGNNSGSDENKSESDSTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPINDTPAPPANDLRTVPERPFKCATCPTSTFSSLETLKKHMSSRHGSDSQPGSPNPENHEDNAEGLVFKCHLCEASFGERSGALNHLAAAHASEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEVTDDEDASPPTTPDEKVNGYRYQDDDSGNEIPSNVNNNNSPPAAPFDKKIKLDMTSRKYSSEAETDIDNGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00407067;
80% Identity: -