Basic Information

Insect: Cyclophora punctaria
Gene Symbol: pita
Assembly: GCA_951394245.1
Location: OX596171.1:5691284-5704534[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3 2.3e+02 3.0 0.5 2 23 189 211 188 211 0.87

2 10 0.00032 0.024 15.5 2.4 2 23 217 238 216 238 0.97

3 10 0.00013 0.0098 16.7 1.1 1 23 244 267 244 267 0.97

4 10 0.024 1.8 9.6 0.1 2 23 274 295 273 295 0.96

5 10 1.9e-05 0.0014 19.3 0.4 1 23 303 326 303 326 0.95

6 10 0.00064 0.048 14.5 1.2 3 23 334 354 332 354 0.97

7 10 0.0058 0.43 11.5 9.0 1 23 360 383 360 383 0.97

8 10 0.00058 0.043 14.7 0.2 1 23 393 415 393 415 0.93

9 10 0.0025 0.18 12.7 0.0 2 23 421 442 420 442 0.97

10 10 0.0012 0.087 13.7 0.1 1 23 448 471 448 471 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3	2.3e+02	3.0	0.5	2	23	189	211	188	211	0.87
2	10	0.00032	0.024	15.5	2.4	2	23	217	238	216	238	0.97
3	10	0.00013	0.0098	16.7	1.1	1	23	244	267	244	267	0.97
4	10	0.024	1.8	9.6	0.1	2	23	274	295	273	295	0.96
5	10	1.9e-05	0.0014	19.3	0.4	1	23	303	326	303	326	0.95
6	10	0.00064	0.048	14.5	1.2	3	23	334	354	332	354	0.97
7	10	0.0058	0.43	11.5	9.0	1	23	360	383	360	383	0.97
8	10	0.00058	0.043	14.7	0.2	1	23	393	415	393	415	0.93
9	10	0.0025	0.18	12.7	0.0	2	23	421	442	420	442	0.97
10	10	0.0012	0.087	13.7	0.1	1	23	448	471	448	471	0.96

Sequence Information

Coding Sequence: ATGGATGTCAGAAAAGAAACTCTGTGTGGCTTAAAAATGTGTCGATTCTGCCTAAATCGGAATGAATCGTTATCAACGATGTACGAGGGCAGCAAAGCGCCAAAAACTGCAGTGCCATTAtctctaaaaatattatactgcATCGGACTCGAGatattcCCATCGGACAAGATGCCCCAATTCATTTGTAACCGTTGCAAATTCTTCATGGAAATCAGCTATGCATTCAAACAGATCTGCAGACAAGCCGATGAAAGATTACTTCAGTATGTTCAGCATGGATCACCGATAGAATCTATCAACTGGCCGGCAGCTCTTTCCaaaGTATTCCGAGCTATGAACAAATCAACAGAGGGAGTCGTAGAGACAGTTGTTCAGAGCGGGGAAACTAAGGTGAAGGTGACGGCTGAAGAGGTGTCCGACAGTGAGGAAGGTGAAGATGATGATGTTTATAATGTAAAGattGCTGATGGTCCTGAAGAAGGAAAACGCGTCAAGGTTGTCACTGATACCAAATGTAAAGATTCGGAAGATTCTATCGTAGCCGTGCACCAAGGGTGTTGGCCGTGCGATCAGTGTGACTGCACATATCCTCTAGAACAGCTGCTCTCGCTGCACAAAGCGCAGAAACACCGCGCCAGGAAAATCGAGTGCAGAGATTGCGATGCTAAATTCTTCACCAAATATGACTTGTGTACACATCAGCTGACCCACACGGACGATTTGCCGTTCCAATGCGTCGCCTGTGGGAGGAAATTCAAACGGCTGATACTATTGAAACGACATGAAAAGACAATGCACGCTGAATTGCCGCAGAAAATGTGCCCAGATTGTCCTGCAACATTCTTGTCTATGGAAGAACTAACTGCCCATAAACAGAGGCACGAAAAGTACACCAATCGGCCATACGTTTGTGATATTTGCGGTAAAAGGTTCCATGACAGAGTGATGCTAGTGAAGCACATTGAAAACGTGCACACCAAAAAGCCAGCGTTCGGCTGCCATTACTGTCCGGAGCAATTTTCCACGGTATCGAGGCTGACCCGGCACGTGAAAGCTCATGCAGGCGAGAGGCCGTACCCGTGCAAGCACTGCGACAAGAGCTTTTTGAAATCTCATCACTATACTAGGCATCTCCGTCTCAAGCATCGCGAGGGTGAAGTGACCGCCAGTGAGTACCGTTGTGAAGAGTGCGGCACTTCTCTCCGCTCACAAGACGAGCTCATGTACCATTCAGCGCTGCACGCGACCAGAAATCTTGTGTGTCCGCTGTGTCAAGAGAAGTTTGAAGACGTCGACACAGTCACTGCACATATTAAGAGCCATGTTACTGGTACGGAATATATGTGCGACTTCTGCGAGCTAATATTCACAACTAAGGAGAAACTTGACGCTCACATAGCGAAGGCTCATGACGATGAACTATTGGCTAATGAACAGGATATGGACGAAACATCAATGGATATGGATGCTGAGGACGATGACGATAATTCTATAAATTTGACAGAAGAAGATGGTCACATGGTTGTCCAACTTAAGAAGGCTGATGATTACATGCTCCCAAATGTAGACGAATCTGAAGACCAGATTGAAAAGGTCGACCTCGCTCAGTCGGAAGaaagTGAAGCCGAAGAAACTCTACCTAACATCACAAATGAGCTAGAGAAGTCATTGATCTCGGAATCTCCCTCCAAAGCTGCCGAGGCATTGAAGATGATCAATCAAGGCAGACGACCCTCTGTTGTCATTGAGAAGTGTATGATGCCTACACCCGCAACTGTAGCTGAAACATCGGATGTCGTATCTTGTGTTGTCGCTAAACAAGCTGATACTAGTGAGAAAacgGTatcaaacataataaagaaaccTGAGGAAGTCAAGCAGAAATTGGGTCAACTGACATCTGGTTCTAGCAATACagCTGACAAAAAGGATAAGTctaacaacaataataaagttGTTAGCAGCAGTACCCCCGGAGCGAGCGAGAAATCACTGCGTTTGTTGGAGAAAGAGCTACAGGAACTGAAGAGGACAAGTCGCCCGGAACTTAAGACGCCGTCAAAACCCGTAGAGGCTAACAAGAATAAGAGACCACAGATACACACTTCCACGCCAAAGACTAGaaGTGCAGACAAGAAAGAAGCACAAACACCGAAAACTGTTGCCGAGAAACCAGCGTTTGAGAAGAAGGTTCTAGAACGTCGCGCTGTCCCCAAAGAGAACAAGGAACCGAAGGAATTGAAACTCAGCACTGTTAAGGAGGATGAGGGCAACAACACCAAAGAAGATGAGAATACCGAGAAGAAGGAGGCGAAGGACACTTCAAAGACTTCAGTAAAGAATGGTGTGAGCGAGAAACCAAACGTGGACGATTCAGTTCGCCGATCCACGAGACCCTGCAAGATCAAGGACTATGCTAAAATGATTCGCGATGAATCATCGTCCGGCGATGAGTCCGATGAAGCACCGGAAGAAGACGACGAAGGCAATACCGAGGGGAAGACACCTAAAATGTCAAGAGGCCGTCCCCGCAAGAAGACCTTCGTACATTCGCCGACGGCGGGCGCCAAGAAACGGGGACGACCGCGCAAAGAGAAAACGCCTGTCGTACCAGCTAAAATCAAGAAGGATGATACAAGTGAGGATGAAGCGAAGCCTAAAGCCGAGCCCGCTAAAGAGGCGCCAGTTAAAGAGACTCCAGTTAAGGAGGCGCCGGTTAAAGAAACCCCGGCTAAGGCCAAGTCTGACGTGCAAATTAAACCCAAAGAAAGTACTCCTACTCCGGAAAACAAGCCGGCCCAACTGAAGCCAGCGAATGAATCCAACTCCAACATTTTGGTTTCACCGTCAGGACAGACACTGAAAAGGGTACCGATAAAATCATTGCCGCCCGGAGTGAAACCACTTCCTCTACCGAGATCAATGGGTGCCGGTGAGGTTTGCGAAATGCAGATCGGTAAGAAAGTAGTCAAAGTGCAGAAGATCGTCATGACCAAAGCTGAAGTAGAAGCTATGGCTAAGAAGGGCCTGGTTGAAATGAAGGATGGTACGATGGTGTTGAAGCAAGGTATTAAGTTGCCCACAGTAACAGATGCATCTGGATTAAAAGCAACAATGGCGGCAGAGGCAGacAAGAAGCAAGAATCTCCAAAATAG
Protein Sequence: MDVRKETLCGLKMCRFCLNRNESLSTMYEGSKAPKTAVPLSLKILYCIGLEIFPSDKMPQFICNRCKFFMEISYAFKQICRQADERLLQYVQHGSPIESINWPAALSKVFRAMNKSTEGVVETVVQSGETKVKVTAEEVSDSEEGEDDDVYNVKIADGPEEGKRVKVVTDTKCKDSEDSIVAVHQGCWPCDQCDCTYPLEQLLSLHKAQKHRARKIECRDCDAKFFTKYDLCTHQLTHTDDLPFQCVACGRKFKRLILLKRHEKTMHAELPQKMCPDCPATFLSMEELTAHKQRHEKYTNRPYVCDICGKRFHDRVMLVKHIENVHTKKPAFGCHYCPEQFSTVSRLTRHVKAHAGERPYPCKHCDKSFLKSHHYTRHLRLKHREGEVTASEYRCEECGTSLRSQDELMYHSALHATRNLVCPLCQEKFEDVDTVTAHIKSHVTGTEYMCDFCELIFTTKEKLDAHIAKAHDDELLANEQDMDETSMDMDAEDDDDNSINLTEEDGHMVVQLKKADDYMLPNVDESEDQIEKVDLAQSEESEAEETLPNITNELEKSLISESPSKAAEALKMINQGRRPSVVIEKCMMPTPATVAETSDVVSCVVAKQADTSEKTVSNIIKKPEEVKQKLGQLTSGSSNTADKKDKSNNNNKVVSSSTPGASEKSLRLLEKELQELKRTSRPELKTPSKPVEANKNKRPQIHTSTPKTRSADKKEAQTPKTVAEKPAFEKKVLERRAVPKENKEPKELKLSTVKEDEGNNTKEDENTEKKEAKDTSKTSVKNGVSEKPNVDDSVRRSTRPCKIKDYAKMIRDESSSGDESDEAPEEDDEGNTEGKTPKMSRGRPRKKTFVHSPTAGAKKRGRPRKEKTPVVPAKIKKDDTSEDEAKPKAEPAKEAPVKETPVKEAPVKETPAKAKSDVQIKPKESTPTPENKPAQLKPANESNSNILVSPSGQTLKRVPIKSLPPGVKPLPLPRSMGAGEVCEMQIGKKVVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKLPTVTDASGLKATMAAEADKKQESPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407037;
90% Identity: iTF_00407037;
80% Identity: -