Basic Information

Insect: Cyclophora punctaria
Gene Symbol: Sall1
Assembly: GCA_951394245.1
Location: OX596176.1:8500042-8507732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.4 1.1e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 13 0.0077 0.57 11.1 0.3 1 23 1015 1038 1015 1038 0.94

3 13 2.3e-05 0.0017 19.1 2.5 2 23 1153 1174 1152 1174 0.97

4 13 0.00018 0.013 16.3 1.9 1 23 1180 1202 1180 1202 0.98

5 13 0.016 1.2 10.2 3.2 2 23 1209 1230 1208 1231 0.94

6 13 0.28 21 6.2 0.3 5 23 1244 1262 1243 1262 0.96

7 13 0.021 1.6 9.8 1.9 2 23 1268 1290 1267 1290 0.96

8 13 0.13 9.4 7.3 0.1 2 23 1307 1327 1306 1327 0.96

9 13 0.0001 0.0074 17.1 0.8 1 20 1333 1352 1333 1355 0.92

10 13 0.0011 0.079 13.8 0.9 1 23 1363 1385 1363 1385 0.99

11 13 0.0053 0.39 11.6 7.2 1 23 1391 1413 1391 1413 0.98

12 13 3.8e-06 0.00028 21.5 1.7 1 23 1419 1443 1419 1443 0.98

13 13 0.0013 0.099 13.5 5.2 1 23 1449 1471 1449 1472 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.4	1.1e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	13	0.0077	0.57	11.1	0.3	1	23	1015	1038	1015	1038	0.94
3	13	2.3e-05	0.0017	19.1	2.5	2	23	1153	1174	1152	1174	0.97
4	13	0.00018	0.013	16.3	1.9	1	23	1180	1202	1180	1202	0.98
5	13	0.016	1.2	10.2	3.2	2	23	1209	1230	1208	1231	0.94
6	13	0.28	21	6.2	0.3	5	23	1244	1262	1243	1262	0.96
7	13	0.021	1.6	9.8	1.9	2	23	1268	1290	1267	1290	0.96
8	13	0.13	9.4	7.3	0.1	2	23	1307	1327	1306	1327	0.96
9	13	0.0001	0.0074	17.1	0.8	1	20	1333	1352	1333	1355	0.92
10	13	0.0011	0.079	13.8	0.9	1	23	1363	1385	1363	1385	0.99
11	13	0.0053	0.39	11.6	7.2	1	23	1391	1413	1391	1413	0.98
12	13	3.8e-06	0.00028	21.5	1.7	1	23	1419	1443	1419	1443	0.98
13	13	0.0013	0.099	13.5	5.2	1	23	1449	1471	1449	1472	0.95

Sequence Information

Coding Sequence: ATGGATCAACTAGTCCAGTGCCCAGTGTGCACTCTATTCCTCCACAATGGAATGTCATTGGAGTCTCACCTTGACACACATCCCAAAGATCAGGTTATCAAAGCCCTCTGCAGCATTGCCAACAAAAGTTCAAGCTGTGCCAGTAGTAGAACATCAACTCCTGCTAACTCAGAGAGATCCTACAGAAGCAGGTCTCGTACGCCTGCAACTGAAGACAGTGGTCGGTGGAATGGAACCAACAGGAGTTCAGACCCAGATAGGTATTGGGGCCGGACCCCTAGTGGGCACTCCAGTAGAGGGCAGAGTGGGGCTTCCAGCCGAACACCAAGTAGGGCACCAAGCAGAACTCCCAGTAGAACACCAAGTAGGGCTGCTCGGTCCAATTCATCAGTCAATATATCAAGGAACTGTACTCCTGACATGAGGTTAGTGGACAACCTGACATTCGAATCAACAACAGTGAGTAGTGGGTCACAAAGCTCGATACCTATACAATTAAGTAAAGCAGACAAAATGCAGCAAACTTACCCAACACCAATATCTGAGTTTGATCAACAGTACATGTACTATATGGACCAATCAGAGGACCGAGAAGTGAAGTACTCCCGCAGTGCAGAGTACAATGCATTAGATGCTAACAACATGTTGAACTGCAACATACCCACAATGCCAACATGCCAAGTTGAGCACAAATTCCATCCCCACCATCAATCAAGTGCAGTTCCTAGGAAAAGAAATGATCCTGTGAAAATACTGCCGAAACCAAATAAATTACTGAACTTGATGAAATCTAACATCAGTGGGATGCAGTACATGGCACCTGGAGTGAAACCTATGCATGTGATGGTGCCCACTGCTCCAACATTTGTGCAGAAGAATGTTCAGAACAGCATGATCATGACTGGCACATTGCCAAATGCTCAAGCTCAAATGGAGAAATCTGTCCCTCCATTAGTCCAGAATCATTTCAACCAGCTCACGTCAAACACCTTCACTCCGGGCACTACAGTTGTGACACAAAACTCTCAATACTTTTATCAGGAAATGGTTCAGAACATTGATCCTAAATCTATTATTCCGAGCATACCTGCTATGTTCACTGGTCATGAGAATGTAACAAATGTAGCGCAGACTAGTTCAATGTACCAGAATGTGATGCTTGTAGATCAGTTTGGCAACACCTCATGCATGTACGCCACTCCTCAACAAATGTTACCTAAACCGTGTCCTCCATTGTTCGGAGAAACGTCAATTTTACCAAACGCCCATACGGATAAATCTGGATCTTTGATGAATGATcctaataaaactttaataatagaAGTCAGTCCAATGGTGCCACCTGCTTCGGTGAGCTCCTGTAGTGTTACCAGAAGCACTGGAGTGCCATCTGGCAGTAGCATGAATCTTAATAACTTTACCTCAACTAAGCCTAAAACTTCACTTTCTATACCTAAAGTTGAAGCCAAAACTGAAATTCAAACCACCGCAACTAAGGGTCTAAAGATATTGAGCAATATAAAAGTAGAAGTTCCTGTGCAGCACAGTAAGAACATGATCAACACAGTGATGGACCTCACTTGTTCCAATGATTCAGAGTACCCTGACAGATCAGTCTCTCCTGAGAAAATATTGCCGGATCTGGAAGAACACAATCAATTGAGTTCCGATGACTTCACTCAACCCTCTACCAGCAGTGGGGAGAACTCCAATTCGTTTGCTGAACTGAAGAAGATCACAAGTCCTACCTCAAATAAAGACTTGACTAGTAAGACTAGCAATGTAGATAATAAATTAGATACTGAGTTTGGTGATAGCTGTCCTGTGCCAGATTTGATATGTAACGAGAAGCCTTCCATTTCCCCTTGTAGCGAACTGTCGGAGAGTGGCGACAACTCCACCGACCGCACTTCAATCTCACCAAAGCCAGAAACTAGTGGTACAAGTAAAAGTGTAGTAGATAGTAAAGATAACAAATTTCATTTGCCaattaaaccatttaaaagcAATCCATTAAGACTGAATAACATTTTTGTgaagaaaagtaaaaaagtattacaaataaaaaatgctaAGTTATTACCCGGTCGTTCTAGAAACGAGCCCGTCCCGATGCCGTGCAGTTCTTCCAGTTTGATACCGATCAAATTCGCGACTAGTAAAAGTCCTAAGATGGCGAAACTAGAAATATCTACATTGAAGACTATATCTATTGAGGAGATCAAGGAGAAGATCGAGTTGCCTTATGAAATGAATGAGGCGGAGGCGAGAGAGAACGATGCGGGGGAAGAGGCGCCGGGCGGCGTGCGGGTGAAGGAGGAGATTAGCACGAGCAACGAGGGTGGGTTCAGTAACGAGGCGCGGCACGAGGACGCCGCGCTCGACCCGCTGCGCCCGCTCACCGCGGCTCACTACCAGAGCATGTCGCCCGCCGACTTCGACGACGAGACTAGCAACCGCGAGCTACTCGACCTCGGCGGCACCAACAAGAGTAAACAATTCGTCAACATGATGAACGACAACTACTTCGGAGACAACATCTACGCGGACTACTTCACTCCAGATAGGGTAGAAGGGTTCGACGACAAAGGGCCCACCGTTTTCAAAGACAACTCGAAAGAAGCGTTTTCTTGTAACATTTGGGGCGAGCCGTCTAATAAAGAAAGCGAGTTTGTTCTTCCGAATTTCATCCATGAGAGTTACAAGATCGCTGATAATGGAGTGGAGTTTGAAGGGAATAAGAGTAAAGATGTTGGTGAGAAGGATAGCAAGGTTGACTTGCTGAGTGAGAGTCGTAGTGATGGGGAGCCGACGCTGAATATTTGTGCTGACGAGAGGATGCCGCCGCGGGGCGAGCTCAGCGGACAGGAGAGCAACGGAGACATGGAGTCCGCGTGGAATGGGGTATATAGCGAAGTCACTCCAGCGGAGCCCTACGACCTCATAGCGCGAGAGAGTTGGGTCTCCGATGGTTCTGAGCTAGACACCAACGAGAAGAGAGAGAGCctAGAGGAAGAACTGCACTTCGCCAAAGTCCGCCGGCACACTTGCGCTCAATGTGGGCTTAAATTCCCGACACTAAAAGAAATGCGCGCCCACAAAGCAGTTGCGCACGTCCTACCAACTTGTTCGGCTACGAAGACCAGCTATAGTCGTATGGTTACTGCCAGAGCGATAGCTATAAAGAAGGAAGAGAAGCCAGATGATAACAATATCGCGTGTACAGATACCAAGCCCATTGCAGCTAACCTTCTCTCCATGGACTCCAAAGAGACGATAACCTCCACTATTCTCAAAGTATATGACATGGACGAAGATAAACCCAAGTTGGACAAGTTACAGGGATTGCTCAAACAGGAAACTAAGAGGAAGCGACGGGACTTCGTGTGTCCCACATGTAAAGTAGATCAGCTGTCGGAGCCTGCATTCAACGCTCATCTAAAAATCCATCCCTTAGAATGCCTCACGTGCGGCAAATGTTTTTACAGACGAGCCAACCTCTCGCTTCACCTCAAAACACACTTAGGAATCAAGAATTATGTCTGCAACGTATGCGAGAAGCGGTTCATCACTCGCCAGAAGCTGATGGAGCACCACAACATCCACACGGGCCGCGCGCCCATCAAGTGCACGCTCTGCGACGACACCTTCCGCCGCTACTCCAACATGTTGCAGCACCGcgaCCGCCATCACTTCAACAAGCGAGCCAAGAGCCGCGAATGGGTGTGCGGCTGTGGGCTCGTGTTCAGCTCGCGGGCCCGCTTCCTCTGGCACAAGGAGACGCACGACGAAAAGCCCAAATCCTGTCTCTACTGCAGCGACAAGTTCGTACACGCGGCGAGCCTCACCAGACACGTTCGCCGCTCGCACAACCAGTATTACTTGCACCATCCGACGAAAAGCAAGGCAGATAATGTGCCCTGTCCTATATGTAAACAGGTGTATCTCCGCACGAACCTCGGCACGCACTTGCTCACGCACAGCGGCAAGCGTCCCTATTCGTGCGTGATTTGCAACAAAGGATTCACCACCAAATGGAACCTGAAGCTGCACCGGTGGACGCACATGTCTCGCTCAGCGAAGCCCTACAAATGCACCCTCTGTAAAAGCGCTTTCATACGGCGCGTGGAATACGTCAGTCATATGAACTCGCACAAGTCCCTACGGCCTTATACTTGTAACTACTGCGGCTGTCAGTTCATACGCAAATACAACTGTCAAAGACACGTCCGAGAACACGAAAGTGCTAAGAAGTTTGTATGCAAAGAGGCGGAATGCGGCAAGTCTTTCCATCGGAGTTATTACCTAACTGAACATATGAAAGTGCATAGTGGTGCGAGACCATTCTCGTGCACTATTTGCGGTAAGACGAGTAGTAACAAAAGTAATCATAACAAGCATGTTAAGATTCACCACGCGCGTGAGCCCGTGGCCACAGAGGCCTAG
Protein Sequence: MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSIANKSSSCASSRTSTPANSERSYRSRSRTPATEDSGRWNGTNRSSDPDRYWGRTPSGHSSRGQSGASSRTPSRAPSRTPSRTPSRAARSNSSVNISRNCTPDMRLVDNLTFESTTVSSGSQSSIPIQLSKADKMQQTYPTPISEFDQQYMYYMDQSEDREVKYSRSAEYNALDANNMLNCNIPTMPTCQVEHKFHPHHQSSAVPRKRNDPVKILPKPNKLLNLMKSNISGMQYMAPGVKPMHVMVPTAPTFVQKNVQNSMIMTGTLPNAQAQMEKSVPPLVQNHFNQLTSNTFTPGTTVVTQNSQYFYQEMVQNIDPKSIIPSIPAMFTGHENVTNVAQTSSMYQNVMLVDQFGNTSCMYATPQQMLPKPCPPLFGETSILPNAHTDKSGSLMNDPNKTLIIEVSPMVPPASVSSCSVTRSTGVPSGSSMNLNNFTSTKPKTSLSIPKVEAKTEIQTTATKGLKILSNIKVEVPVQHSKNMINTVMDLTCSNDSEYPDRSVSPEKILPDLEEHNQLSSDDFTQPSTSSGENSNSFAELKKITSPTSNKDLTSKTSNVDNKLDTEFGDSCPVPDLICNEKPSISPCSELSESGDNSTDRTSISPKPETSGTSKSVVDSKDNKFHLPIKPFKSNPLRLNNIFVKKSKKVLQIKNAKLLPGRSRNEPVPMPCSSSSLIPIKFATSKSPKMAKLEISTLKTISIEEIKEKIELPYEMNEAEARENDAGEEAPGGVRVKEEISTSNEGGFSNEARHEDAALDPLRPLTAAHYQSMSPADFDDETSNRELLDLGGTNKSKQFVNMMNDNYFGDNIYADYFTPDRVEGFDDKGPTVFKDNSKEAFSCNIWGEPSNKESEFVLPNFIHESYKIADNGVEFEGNKSKDVGEKDSKVDLLSESRSDGEPTLNICADERMPPRGELSGQESNGDMESAWNGVYSEVTPAEPYDLIARESWVSDGSELDTNEKRESLEEELHFAKVRRHTCAQCGLKFPTLKEMRAHKAVAHVLPTCSATKTSYSRMVTARAIAIKKEEKPDDNNIACTDTKPIAANLLSMDSKETITSTILKVYDMDEDKPKLDKLQGLLKQETKRKRRDFVCPTCKVDQLSEPAFNAHLKIHPLECLTCGKCFYRRANLSLHLKTHLGIKNYVCNVCEKRFITRQKLMEHHNIHTGRAPIKCTLCDDTFRRYSNMLQHRDRHHFNKRAKSREWVCGCGLVFSSRARFLWHKETHDEKPKSCLYCSDKFVHAASLTRHVRRSHNQYYLHHPTKSKADNVPCPICKQVYLRTNLGTHLLTHSGKRPYSCVICNKGFTTKWNLKLHRWTHMSRSAKPYKCTLCKSAFIRRVEYVSHMNSHKSLRPYTCNYCGCQFIRKYNCQRHVREHESAKKFVCKEAECGKSFHRSYYLTEHMKVHSGARPFSCTICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407019;
90% Identity: iTF_00407019;
80% Identity: -