Basic Information

Insect: Cyclophora punctaria
Gene Symbol: -
Assembly: GCA_951394245.1
Location: OX596193.1:460448-476089[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.7e-05 0.0027 18.4 1.2 1 23 52 74 52 74 0.98

2 15 0.069 5.1 8.1 0.9 1 23 80 103 80 103 0.97

3 15 0.068 5 8.2 6.0 1 23 109 131 109 131 0.97

4 15 7.5e-06 0.00056 20.6 1.8 1 23 137 159 137 159 0.98

5 15 0.0075 0.56 11.2 5.5 1 23 165 188 165 188 0.96

6 15 0.0011 0.079 13.8 0.9 1 23 195 218 195 218 0.94

7 15 0.0044 0.33 11.9 0.9 1 23 226 249 226 249 0.91

8 15 6.5e-05 0.0048 17.7 0.3 2 23 256 277 255 277 0.98

9 15 2.4e-05 0.0018 19.0 4.2 1 23 283 305 283 305 0.97

10 15 0.00052 0.038 14.8 2.2 1 23 309 331 309 331 0.97

11 15 0.00043 0.032 15.1 1.0 2 23 339 361 338 361 0.96

12 15 0.17 13 6.9 1.4 2 23 368 389 367 389 0.95

13 15 0.077 5.7 8.0 1.5 2 20 396 414 396 418 0.94

14 15 0.33 24 6.0 4.6 1 23 766 788 766 788 0.93

15 15 1.6 1.2e+02 3.9 6.1 1 23 941 963 941 963 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.7e-05	0.0027	18.4	1.2	1	23	52	74	52	74	0.98
2	15	0.069	5.1	8.1	0.9	1	23	80	103	80	103	0.97
3	15	0.068	5	8.2	6.0	1	23	109	131	109	131	0.97
4	15	7.5e-06	0.00056	20.6	1.8	1	23	137	159	137	159	0.98
5	15	0.0075	0.56	11.2	5.5	1	23	165	188	165	188	0.96
6	15	0.0011	0.079	13.8	0.9	1	23	195	218	195	218	0.94
7	15	0.0044	0.33	11.9	0.9	1	23	226	249	226	249	0.91
8	15	6.5e-05	0.0048	17.7	0.3	2	23	256	277	255	277	0.98
9	15	2.4e-05	0.0018	19.0	4.2	1	23	283	305	283	305	0.97
10	15	0.00052	0.038	14.8	2.2	1	23	309	331	309	331	0.97
11	15	0.00043	0.032	15.1	1.0	2	23	339	361	338	361	0.96
12	15	0.17	13	6.9	1.4	2	23	368	389	367	389	0.95
13	15	0.077	5.7	8.0	1.5	2	20	396	414	396	418	0.94
14	15	0.33	24	6.0	4.6	1	23	766	788	766	788	0.93
15	15	1.6	1.2e+02	3.9	6.1	1	23	941	963	941	963	0.96

Sequence Information

Coding Sequence: ATGGATTCTGATGTCGAAGACTTCCATCCTCATGAGATATTAAGGAGTAATTTGAAACGGACGGCAACTAGAAAGTCAAGTCGAGTAGTTGTGAAGAAACAAGTAATTAATATGAAGTCAAAGACTAACGCCAAGAAAAAAGTATTCACTCGGTTCAAATGTGAAGTTTGTAATAAGgAATTCGACAAGAAGGAATACCTGAAAAGCCATGAAAATGTTCATAAGACTGAGTGTAACTACTCGTGCACGCAGTGTGCCTACAGAGGGAAGACTGTCAAATACCTCTCCAGACATATACTGAAGGTCCACACCGCGCCTACAGCTCACAGATGCAGTTACTGCAACAAAGGGTTTCACCATCTTGTGAGATTGAAGGAACATGAAATGGTACATACTGGAGAGAAGCCGCACCAATGTGAAGTATGTTTCAAATCCTTCAGAGTACCGTACTCTCTGAAAACTCACATGTTAATACATACAAACGAGAAGCCATACCAATGCAGTTTCTGCTCGTACGCGTGTCGCGACAGCTCCACGCTCTCCAAGCACCACAACAACGTGCACATGAAGGTCCGGCGGGACTACCCGTGTCGGCTGTGCGGCCGCCGCTTCAAGCTGAAGTACCTGATGAAGCAGCACATAGCGGAGTTCCACCTGGACATGGACCTGCGCCGGTTCAAGTGCGCTCTCTGCGACAAGGCGTTCAAGAAGAACGACACGCTGCTGTTCCACAAGCGTGCAGTACACGAGAGGCAGCTGAAGACGAAGTGTCCCGTGTGCGCCGCGAGCGTGTCCAACCGGTACAACCTGCAGTCCCACCTGAGGACGCACACCGACCTGCGGCCGTACGCCTGCAAGCACTGTAACAAGACTTTCAAGGACAAGTCGGCGATAACCAAACACAGTCAGACGCACGCGCCGCGTTACGCTTGCGATACGTGTGGGCGGCGATTCAGCCGCCATCTAAGGCTGGTGCGACACCGCGCCACGCATCTCGCGCGACACAAGAGCGTACAGTGCGACTACTGCGGAGATAAATTTTACACAAAGAACTATctaataaaacacataaagCAGAAACATTTGGAACAACAGATATGTATATGTGATATGTGTGGCTTCGAGTCTCACAACAAGCCAGCACTCATAATGCATATCAAACAACATGCGACTAAAAATgaTCGCACCTGTAAGATATGTAATAAGACACTGAAACTACACGCTTATCTGAAGCAACATTACTGGGTTACTCATAACATTAGGTATAATATCAAGAAAGTTGCTAAACGGAAGATTAAAAACGCTAAACCAGGCGTTGAAGTGAAGATTGAGCCAGTGGACACTTACGAAGGCATCGTCGATGTTAACGAAACTACGCAGGAAGAAGAAGTGATATTCTACAGGACGATACTCTACTTCACAGACGATTCCACTGCGTATTCCAAGATGGTGCTCTCCGAAGACATCGAGTCGAAACTACTGGTCGACAACCCGAATGTCACTGAAGTAGAGTTCGACGACTTCGTGCTgcataatatgtttaagaaagcTGTCAAAAATGAAGaGAACTTAGATGCCTACGAAGATATTGATCAGGAAACTCTCGCCGAATCGAACCGTCAAGTGAGAGAGATGCTCAAACTAGCTCAAAAGAAGAGAGAAGAAGAACAGAGGAAGAAGGAACTGATAAAGAAGGAGAAGAAACTGCTGAGAGAGAGAAGGATAAAGAAGAAGCTGAGAAGGAAGGAGATAGGTGAACTGTACAGAGTGATATTTATGTACAATGATAGGATACGGAGAATGAGACAGAGGAGTGGGAAAGAACAAGTCAAAATAACATACTTTAACGCCAAAAATAAAGTTGACAGCTCAAAAACCAAAAATGTTGAGTCAAATCAAAATGATAACAGTAAAGAAAGAGAAGAAAATACAAATGATGACTTCAATAACGATTGTCAacatgatgaaatgaaagatttagtaaataataatgaagttaATGATGACAATGAAACTACAGCCaaagatgatgatgatgatgatgtaaataaagatgattttgatgaaattggaaataaaaatgatgATTTAGATGAAAAAGATGAAATTATAGATATTGATGAACATAATAAGAATGTTTGTGAAGAAAACCTAATTAAGGATGATGAAAGTAACTCTATAGATGATGAAAGTCGAAATGATGATGAAAAACCAGATATGGATGATGAAAATGATGACTTTGGAGATGAAAAGCCGTTAAATGATAGGAGAAACAAGAAAATGTCATTCAAAAGCTATCAATGTTATATCTGTTTTAAGTTATACCCAACCAAGGAAGATCTTCACCAACACTGTCAGATTCATTTCGACCTCTGCAACAACACTACTCTCTTAAAATGTCCTCTCTGCACTCACGTTTCAACCGCGAACATCACTAAACACATTTTGAAAACACACGGCTTGGACATCAAACTACCATACaacaacatacaaacagaaaccgcatcaaaaaCGGGCTATGCATTCACTGTAGATGACaaagttattgaaattattccTAGTGTCAAAATATTGAACCATAATGCTTGTAAGAAAATTGAAAGGAAGACCAAAGAAGATAGGATTATGaatatatctaaaactaagttggttaaaaaaggGAGTGAGTGGGTAGTTGAGAAAACACCGATGGATGTTGATTTCGATGTTTTACCGGAGTTTGATAAGAACGATCTTAAAAAACTGCCTGTATCTAGTAATAATGTTGAAAGACTTAAACAGTTGAGTCGTCTAGCAAAAAAATCCGGTTTGAAAATGGGCTTTCCTTGCTTCAATTGTGATAAAATTTGCCAAAATTTCTCCGGTTTGAAGCTACATTGTCGCAAACACGAATCGAACCCGAAACCTTTCAGAAAAAGGAGGAAGAATTTCACCAAAATCGATACAGTTAAAATAGATGAAAATGAAATAGTGAAGAATAAAGAATTGAGAGTTAAACGACGAACGGAAAAGTCTAAGCCAATTGTGAATAGACACAAGTGCGATGATagtcttaaaaagttttacGAAAATAATATACGAGGCGGTGATATAGAGTTTTGGCAATTTCTGAAAATTTTCAACAGGATGGAACGGGAGAATGTTAGCGAATTTCAAGAATTAGAATCTAGAACCGATTTTGGAATACATTTCGAAGTTCCAGATGATATTGATGATGTCAAAAAAGAAATAGtgagcgagtttgatctgcagtga
Protein Sequence: MDSDVEDFHPHEILRSNLKRTATRKSSRVVVKKQVINMKSKTNAKKKVFTRFKCEVCNKEFDKKEYLKSHENVHKTECNYSCTQCAYRGKTVKYLSRHILKVHTAPTAHRCSYCNKGFHHLVRLKEHEMVHTGEKPHQCEVCFKSFRVPYSLKTHMLIHTNEKPYQCSFCSYACRDSSTLSKHHNNVHMKVRRDYPCRLCGRRFKLKYLMKQHIAEFHLDMDLRRFKCALCDKAFKKNDTLLFHKRAVHERQLKTKCPVCAASVSNRYNLQSHLRTHTDLRPYACKHCNKTFKDKSAITKHSQTHAPRYACDTCGRRFSRHLRLVRHRATHLARHKSVQCDYCGDKFYTKNYLIKHIKQKHLEQQICICDMCGFESHNKPALIMHIKQHATKNDRTCKICNKTLKLHAYLKQHYWVTHNIRYNIKKVAKRKIKNAKPGVEVKIEPVDTYEGIVDVNETTQEEEVIFYRTILYFTDDSTAYSKMVLSEDIESKLLVDNPNVTEVEFDDFVLHNMFKKAVKNEENLDAYEDIDQETLAESNRQVREMLKLAQKKREEEQRKKELIKKEKKLLRERRIKKKLRRKEIGELYRVIFMYNDRIRRMRQRSGKEQVKITYFNAKNKVDSSKTKNVESNQNDNSKEREENTNDDFNNDCQHDEMKDLVNNNEVNDDNETTAKDDDDDDVNKDDFDEIGNKNDDLDEKDEIIDIDEHNKNVCEENLIKDDESNSIDDESRNDDEKPDMDDENDDFGDEKPLNDRRNKKMSFKSYQCYICFKLYPTKEDLHQHCQIHFDLCNNTTLLKCPLCTHVSTANITKHILKTHGLDIKLPYNNIQTETASKTGYAFTVDDKVIEIIPSVKILNHNACKKIERKTKEDRIMNISKTKLVKKGSEWVVEKTPMDVDFDVLPEFDKNDLKKLPVSSNNVERLKQLSRLAKKSGLKMGFPCFNCDKICQNFSGLKLHCRKHESNPKPFRKRRKNFTKIDTVKIDENEIVKNKELRVKRRTEKSKPIVNRHKCDDSLKKFYENNIRGGDIEFWQFLKIFNRMERENVSEFQELESRTDFGIHFEVPDDIDDVKKEIVSEFDLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407005;
90% Identity: iTF_00407005;
80% Identity: -