Cpun004974.2
Basic Information
- Insect
- Cyclophora punctaria
- Gene Symbol
- -
- Assembly
- GCA_951394245.1
- Location
- OX596172.1:3754028-3762815[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0047 0.34 11.8 1.6 3 23 673 694 672 694 0.96 2 23 7.3 5.4e+02 1.8 1.4 4 23 1051 1072 1049 1072 0.84 3 23 0.046 3.4 8.7 0.6 1 22 1077 1098 1077 1098 0.95 4 23 0.00035 0.026 15.4 1.1 3 22 1171 1190 1171 1190 0.96 5 23 0.56 41 5.3 0.8 3 23 1199 1220 1197 1220 0.95 6 23 0.0089 0.66 10.9 0.2 3 23 1243 1264 1241 1264 0.96 7 23 0.00096 0.071 14.0 0.6 1 23 1270 1293 1270 1293 0.92 8 23 0.12 9.2 7.3 0.0 1 23 1319 1342 1319 1342 0.90 9 23 0.0055 0.4 11.6 3.5 1 23 1347 1369 1347 1369 0.97 10 23 0.0084 0.62 11.0 0.2 1 23 1375 1398 1375 1398 0.95 11 23 0.0023 0.17 12.8 1.3 1 23 1411 1433 1411 1433 0.97 12 23 0.00018 0.013 16.3 1.8 1 23 1492 1515 1492 1515 0.97 13 23 0.0038 0.28 12.1 1.8 1 23 1576 1599 1576 1599 0.96 14 23 0.0022 0.17 12.8 1.5 2 23 1625 1647 1624 1647 0.95 15 23 0.016 1.1 10.2 0.1 2 23 1653 1675 1652 1675 0.94 16 23 0.0065 0.48 11.4 0.3 1 21 1719 1739 1719 1740 0.95 17 23 0.0012 0.09 13.7 0.6 1 23 1750 1772 1750 1772 0.93 18 23 0.001 0.077 13.9 0.2 3 23 1862 1883 1861 1883 0.92 19 23 3.3e-07 2.4e-05 24.9 1.4 3 23 1890 1910 1889 1910 0.98 20 23 0.22 16 6.6 1.4 3 23 1931 1951 1929 1952 0.95 21 23 0.12 8.9 7.4 0.0 1 23 1974 1996 1974 1996 0.97 22 23 0.027 2 9.4 0.6 1 23 2002 2025 2002 2025 0.95 23 23 0.00025 0.019 15.8 0.4 1 23 2033 2056 2033 2056 0.96
Sequence Information
- Coding Sequence
- atgagTGTGAACTATGATCGTGTTTGTAGACTGTGTTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTTACATCCTAGCTTCAAAAATCAAGGATTGTGTGGCTGTCCAGATAAATGAAACTGACAATCTTCCTACAAATGTCTGCAGAAAATGTGTAGACAATGTCAATAACTGGCACATATTCAAGACTGTTTGTGAAAAGGCACAAAACAAACTACTGTCTCTGATTGAAAAGGATGGAAGCCTACTAGAAGAGGTGAATGTGAAAAGTGAGCCCTTATCTGATGGGGCTTATGATGATGGAGTGGTTATTGACGGCTCATACCATGATGTGGAGAATGCAAGTGCTTCGAGTAAACTACAACCTGAAGGGCCCCCTATCTTGGCTTCATTGGGACTTACACCAAAAAGCGATAAGAAATATGTGGATCCACGAACAGACTGGCACCGAGTTCACGCAATCATGGACATGGTTCGAGATAGTGATGCGATAGACTCCCTACAGTCTCACGAGGAACATGAGAATGTGTGTCACTCTGACCATGACTCGGAGTCTGAAGCCGAACTCCTCACAGACATAGATAGCATGTACATTGAACGAAAACATGGTTACTTGACTAGAAACCAAACTGTTTTAAAGGAAAACCCGGACAATCAAGACATGCCATTTATGAAAGCAAAGAAAAGGAAGATTGCACTGAGAAGACATTTTCCTAGACCATTAAATGTTTGGCAGAGCCTATTTATGGATGAGATACTTGAAATGATTTTATCTTCAACAAATGAGAACATTCGTGATCACTTTCCTGcttctaatattattgataTGAGAGATTTAAAAGTAGTTATTGgtattttatacctacatgGAATCATGAGGTCGACTTACCAGAAACTATCAGACCTTTGGGACAAACAAATTGGACTGCCCTGTATCAAAAAGACTGGGATTACATTCGAAAGATTCAAGTTTATATTGGAACATATAAGTTTTGATAAAGAGTCTAACTATTCTCTTGATCCAATGAGTCGAATCAGTACTGTTTTTGAAAACTTTGCATCAAAATGTAGAActtcttttaatattgataaCATTGCTGTTATTGATGAAGTGATAGTCCCTGTTTATGGGCCGTGCCCTTTCAAATACGAAATTGATAAAAAACCAATAACATCTGGTATAAAATTGGTCCTATTGGTTGATGCGGAGAATTTGTATATCAGTAACTTGGACGTTGTTACAGATAGCATGTCTACTCCTAAGGATATAGTGGAAAACATGACTCAACACCTCCACGGATCAAATAGGACCATAGTTATGGATACATGGTACTTCTCACAAGCTTTAATGGAATCTTTAGCAAAGAATCAACTGTTTACTAATGCTGCTTTGCACCCAGATAGTGGAGATATACCGCCAATCTTCATTTCGCAGTACCGTACGAGCCAAACTGTTATGACTGGCTTCTCTAAAGATAATGTTTCAGTGTCATCATATGTTAACTCTGATAATAGAGTAGTAAATGTAATAACAAATGATCCTAAGTACATGAAGAAAGTGTTGAAGGTTAAGGTCAGCTCTATATCTGTTTATAAGAAGAATCAGTCAGCTGTAGAAGTGATAGATGTTTTGATGCACTACTACACAACGATGCAGTTTACAAATGATTGGTGTCTGTCACTATTCTTTACTATCTTGAACATAGCTGCTGTCAACAGTCAAGTTGTATGGAAGATAAATGCACCTAGCTGTACTATGCTACGTAGAATGTTCATTAGAGATCTAGCCTACAGTTTAATGGTTCCTAGTGATGTAGTGGGGGTCGAAAGCGACAAAGAGGAAGAAGACTACGAAGATGAACCAAATGAAGCTCCTAAAACTATGAAAGTGCCAAACATGCCTGAAGTGTCCATCACAGTGATGAGGCCTACAGGGGAGACCCTCCACGCCCGCCAAGGGATCCAACAGATAGCGTCCAAAGACTGCCTGATCTGCGGCCGAACCTACAGGTACTCACACAACGCGAGGCGACACGAACTCACGTCCCACAGCTTCGACAGGTACACCAATAAAATAACCAGCAAGCGGTCGAGGACACATTCCCGCTCACACATGCAACCCAAACTCAGACCCAACCCCTTCAACCCCAAAGCTCGACTCATGCCCAACCCAATTAGCCACAAAATGCAGTTAGTGTCCAAAAATATGGCCGGAAAAATGATACCCAAAGTCTTAACTCCACCGAAACCTATACCtatcaaaatatcaaaaacgACACACAATAATTTGCCGTACCCGCTACGTATAAAAGCACTGAAAGATTTACAAATTAAGAAGAAAGAACCGCAAATTCTTAAAACTTTGTTGACTTCCAAACCTGAAGTTTTAGTGTCAGAGCCGGAAATTATGAATTCGGGACCAGAGAGTCCTGAGACACTGATATCTGAACCTGAAATAGCATCGTTCCAAGTGGAAGCTATACTTTCTGAGCCGAACGAATATAATCAAAATCAAGACGAAGAAGGTGAAATGGAAATAGCTACCACCCAAAGTCAAAACTATGACACATTGGACATGGAGTCCGATAACGAAATAGAAATAGCAAGGGAACAAGATCATGAAGGAGATAATCCTGAAAATATGGAGGAAGATGACAATCAGACTGACGAGCATTTAAAAGAGAAGGAAGGAGAATCTGACAATGAAAAGGAAGAATTAGAGGGCGAGAGTCAAATAGATAATGATGATAACTATGATGAGACGAGAGAAGAAGACGATGGAAATGACGCAGAAGGAAATGAAGAAGGTGAGAATGAGGAACAGGACCAGACACAGATAGAGGAAAATGAATATGATGATGATGGCCCACCAGAAGGATTGACTCCAGTAGTAGAGATAAACGAAGAACAGCAAAACAACGCCTACAATAGTGAGATAAATGAAGAGGAAGAACCAGATGAATCTGGAACTATAAATGACACAGAAGATGGCGCAGAAGAAGGcggagaagaagaagagaaagAACTGGACAGtgaaaaaacatacataacaaCAGAACAAACAGAATTCATCAAAAATTACCGCAACATCATTGAACAAATTAACACCAAACGATGTCTATGTTGCAATAAAGAGTATCCTCGCAGGAAAGCTGTTATACAGCATCTGCAAAAGAATGGACATACAGTACCTAAACACACCTGCTATAATTGTGTAGTCACCTTCACGCATATCGGCGCGTTACTTAGTCACATGAGGTCCAACTCATGTACAGATTTGTGGAAAGTAATCTATGAGAAGAATGGAATCACTGAAGACATGGTTATTGATGGTCCTAGGAAGGTACAGCCTAAAGATATATTCAACGCGCGGTCGTATGCTTGTAGACTGTGTCCAGCTAAGTTCCAGTTAAAGCAATCAATAATGAAACACGTGTTTGATTTCCACGAGGATGGACAGTCAGCGGTGCCACTTGGCTGCGTCCACTGTCGCGCTAGCTTCAAGGATAAGTCGTCACTGAAGAAACACATTCGCGTCGGAGAATGCACTGTATACGTACACTGTGACCTTTGTTCCCTACAATTTATCAACATGCAACAGTTCACTGATCACGTTTCCACTGTACACGCTGATGACTTCGTCAAATCTGAGAACGAAAGTCAGAATAAATGCGTCGATGGACGGGTGACCGACTGTCCTGTATGTGGGAAAAAGAACAGCAACTATTTGAATCTGGTCAAGCATTTGAGAGTAGCTCATGGCGAAGACAAACCTCATTACTGTCAAAACTGCGACGCTAAGTTCGAACAAGCGAGTGAACTAAATAACCATATCTATGCTGAACATTCTGAGCAAGCTATGAGTGGTGCTCCTACGGAACCCGATATGTCGCTTGTCAAAGAAGAGACTGAGGAATACCATTACTCGTGCACTGAATGTAACGCCATATTCGAAACGGTCGATGCCTGGACCGACCACCAAGTCGCAGAACACAACCAGGTCGCACATCACTGCGACCAATGCGACAAAAAGTTCCTACGACCCTCAGAACTGGCTGAACACAAAAATACTCACTTAAGAGTCAAGTTCTACCCTTGTAGTATATGTTCCAATTCATACAGCACTCCTCAGAAGTTATCAGAGCATGTACAGAACGCACATCCAGGAGTAGGAGCCAATTCTAATGCAGAAACGGAGTTCTTCTGCGACATATGCATCAGATCATTCAAAAGCCGACAAGCGTACTCAAATCATATGCGCATACATTCTAAAGTACCCACTACTAACAGGAAGCCAGGTGAAGCGAAAGGATTCGATCCTCGTATCATCGGTAAACCAATCAAACACTTCAATGTAGTCCAACAACAACAGCAACAACAAACGCAGCAACAGCCTGGGTTTGTCAATTTCAAGCCAAATATTAATGTTCCTAATGCTCCCTACTCATGTGATATTTGTGGTAAAGGTTTTATGcacaagaaaaatatatgGAAACATAAGAAAGTGTTACATGCggatattttaaatgataGAAACGACAGTGAAGAGAATACGATGCATGCTTCAACCGAAGACGACGAATTTAATGTTGATGAAAATGGTACAGCGCTGTCGACGCCGCAGTTCAATAGTTTCAACTTTACTAATTTCGCCAACAACGTACAACAGAATCAGCAACAAGATGCTATGCCGTTCTCTTGTGAGCTGTGTTATAAGCGATTCCCGCTCAAAACTAGTTTATGGAAGCACAAACGCGCCAAACATGGAATTGTTGGAACCGGTTCAACGAGTAGCAATGAAGCTTACGCGCAACAACCGCCGGGCGAGGGAGGGCGTTCGAGTTGTACCATTTGCAAAATAACTTTCCCTGACAAAAAGTCGTACTATCGTCACAGAAAGAATGTTCACAAATCAGCAACTCAAATGTGCAAAATATGCGGTAAACCTCTCAACAACTCCTTAGAACTTTACGAGCATCTTAAGGCCGCTCACGCCCGAGAGCTTTTGGGCTACGATCCAAATCAAGGGTCGAGCAAATCTCAAGACGTGTCCCAAGACATGGACGGAGATTACGACAACGACCAAGAAACGACTGACCCCAGCGTGGACTACCAAGCGCGGTATCCGTGCGACACTTGCGGGAAACAGTTCGTCGGTCTACTCTCATTACAAAACCATCAATGTATTAACCAAGTACCACCGCAACCTCAAACGTTCGATTGTGAAATTTGTCATAAGAGCTACACCTCTATCGCTGCATTGAAAAGTCATAGAGGTTGGCATTTACGGTCGCCGGACGGCAAAGCGGCTGCCAACAACAGCGGTCTTTGGATGCCGCAGCACAAAGTGACTAGTAAAGTGAGCAAACACGAAGTCGTCGATCCTTCGCAGCTGGCGCGCGTCCAGCACACGACACCCGCGGCGGTGGTAGCCAAGAGGAGACTCCCGCCGGAGGTCGAGGTGACGGTCGTTAATCCCAACAAAAAACTACGTTCAGACGACTCGGTCGAAACAGATTTACAAATCAATGAGTCAATCGAAGGAAGGTACTGTGCGTTATGTGATAAAGAGTTTACAAAACGAGCTGCCTACCAGCGGCACATGGACGAGGTCCACCAACCGAACTCCGTGTTCTGTCCAGTTTGCGACAAGAGTTTCACACGAAAGTCTACACTCTTGGTGCATATGAAGAAACATTACGAAGGAGGGGAGGGTAGTTCATCGAATGCGGGACTTGTGGATGACGATCCTTTCGGCTGTGAAGTATGTGGGACGCAGTGTGAGAACGAGAAAGCGTTGCTAGCACATAAAGCGAGGCATCACGGCGAGGACGAATCTGGGGATTCCGAGGATGACGGCAACGTGCCTATCGCTCAACCAGGAGAGTTCACCTGCGGGCAGTGTGGCGACGGGGTGGCAACGCCGCGCGACCTGATAGCCCACCGCACAATGCATTCAACCCCTACGAAGTTCTTCTGCAATATTTGCAAAGTGTATTTCGCGAGAGCATTAGACTTGTCGTCTCACACGAGGGCGCGACACGCGGACAACGACAAAGTTTTCTTCCCCTGTGCCATGTGCGATCGTTTCTACATGAATAAAAAGAGTCTTCAGCGCCACATCGAGATGGCGCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPYILASKIKDCVAVQINETDNLPTNVCRKCVDNVNNWHIFKTVCEKAQNKLLSLIEKDGSLLEEVNVKSEPLSDGAYDDGVVIDGSYHDVENASASSKLQPEGPPILASLGLTPKSDKKYVDPRTDWHRVHAIMDMVRDSDAIDSLQSHEEHENVCHSDHDSESEAELLTDIDSMYIERKHGYLTRNQTVLKENPDNQDMPFMKAKKRKIALRRHFPRPLNVWQSLFMDEILEMILSSTNENIRDHFPASNIIDMRDLKVVIGILYLHGIMRSTYQKLSDLWDKQIGLPCIKKTGITFERFKFILEHISFDKESNYSLDPMSRISTVFENFASKCRTSFNIDNIAVIDEVIVPVYGPCPFKYEIDKKPITSGIKLVLLVDAENLYISNLDVVTDSMSTPKDIVENMTQHLHGSNRTIVMDTWYFSQALMESLAKNQLFTNAALHPDSGDIPPIFISQYRTSQTVMTGFSKDNVSVSSYVNSDNRVVNVITNDPKYMKKVLKVKVSSISVYKKNQSAVEVIDVLMHYYTTMQFTNDWCLSLFFTILNIAAVNSQVVWKINAPSCTMLRRMFIRDLAYSLMVPSDVVGVESDKEEEDYEDEPNEAPKTMKVPNMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRTYRYSHNARRHELTSHSFDRYTNKITSKRSRTHSRSHMQPKLRPNPFNPKARLMPNPISHKMQLVSKNMAGKMIPKVLTPPKPIPIKISKTTHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNEYNQNQDEEGEMEIATTQSQNYDTLDMESDNEIEIAREQDHEGDNPENMEEDDNQTDEHLKEKEGESDNEKEELEGESQIDNDDNYDETREEDDGNDAEGNEEGENEEQDQTQIEENEYDDDGPPEGLTPVVEINEEQQNNAYNSEINEEEEPDESGTINDTEDGAEEGGEEEEKELDSEKTYITTEQTEFIKNYRNIIEQINTKRCLCCNKEYPRRKAVIQHLQKNGHTVPKHTCYNCVVTFTHIGALLSHMRSNSCTDLWKVIYEKNGITEDMVIDGPRKVQPKDIFNARSYACRLCPAKFQLKQSIMKHVFDFHEDGQSAVPLGCVHCRASFKDKSSLKKHIRVGECTVYVHCDLCSLQFINMQQFTDHVSTVHADDFVKSENESQNKCVDGRVTDCPVCGKKNSNYLNLVKHLRVAHGEDKPHYCQNCDAKFEQASELNNHIYAEHSEQAMSGAPTEPDMSLVKEETEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQNAHPGVGANSNAETEFFCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGEAKGFDPRIIGKPIKHFNVVQQQQQQQTQQQPGFVNFKPNINVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMHASTEDDEFNVDENGTALSTPQFNSFNFTNFANNVQQNQQQDAMPFSCELCYKRFPLKTSLWKHKRAKHGIVGTGSTSSNEAYAQQPPGEGGRSSCTICKITFPDKKSYYRHRKNVHKSATQMCKICGKPLNNSLELYEHLKAAHARELLGYDPNQGSSKSQDVSQDMDGDYDNDQETTDPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQVPPQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVQHTTPAAVVAKRRLPPEVEVTVVNPNKKLRSDDSVETDLQINESIEGRYCALCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSNAGLVDDDPFGCEVCGTQCENEKALLAHKARHHGEDESGDSEDDGNVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -