Basic Information

Insect: Cyclophora punctaria
Gene Symbol: -
Assembly: GCA_951394245.1
Location: OX596193.1:2515514-2517781[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0053 4.2 7.9 0.7 18 44 9 32 3 32 0.91

2 15 0.045 36 4.9 0.4 15 41 37 60 34 66 0.72

3 15 0.00029 0.23 11.9 0.0 18 43 71 93 67 94 0.96

4 15 0.01 8.2 6.9 1.4 18 44 102 125 97 125 0.91

5 15 0.00062 0.49 10.8 2.4 16 43 130 154 126 155 0.88

6 15 0.00068 0.54 10.7 3.5 15 43 160 186 153 187 0.88

7 15 0.36 2.8e+02 2.0 0.3 15 42 190 214 188 216 0.73

8 15 0.12 92 3.6 0.1 18 44 241 264 233 264 0.83

9 15 0.014 11 6.5 2.9 5 43 274 309 272 310 0.89

10 15 1.9 1.5e+03 -0.3 0.1 15 22 314 321 311 327 0.85

11 15 2.1 1.6e+03 -0.4 0.0 16 26 344 354 340 357 0.78

12 15 4.8 3.8e+03 -1.6 0.1 33 43 389 399 377 400 0.77

13 15 0.62 4.9e+02 1.2 0.5 14 43 403 429 395 430 0.75

14 15 0.0004 0.32 11.4 0.2 18 43 443 465 434 466 0.91

15 15 9.3 7.3e+03 -2.5 1.1 17 25 512 520 502 522 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0053	4.2	7.9	0.7	18	44	9	32	3	32	0.91
2	15	0.045	36	4.9	0.4	15	41	37	60	34	66	0.72
3	15	0.00029	0.23	11.9	0.0	18	43	71	93	67	94	0.96
4	15	0.01	8.2	6.9	1.4	18	44	102	125	97	125	0.91
5	15	0.00062	0.49	10.8	2.4	16	43	130	154	126	155	0.88
6	15	0.00068	0.54	10.7	3.5	15	43	160	186	153	187	0.88
7	15	0.36	2.8e+02	2.0	0.3	15	42	190	214	188	216	0.73
8	15	0.12	92	3.6	0.1	18	44	241	264	233	264	0.83
9	15	0.014	11	6.5	2.9	5	43	274	309	272	310	0.89
10	15	1.9	1.5e+03	-0.3	0.1	15	22	314	321	311	327	0.85
11	15	2.1	1.6e+03	-0.4	0.0	16	26	344	354	340	357	0.78
12	15	4.8	3.8e+03	-1.6	0.1	33	43	389	399	377	400	0.77
13	15	0.62	4.9e+02	1.2	0.5	14	43	403	429	395	430	0.75
14	15	0.0004	0.32	11.4	0.2	18	43	443	465	434	466	0.91
15	15	9.3	7.3e+03	-2.5	1.1	17	25	512	520	502	522	0.84

Sequence Information

Coding Sequence: ATGTATATGAACCATCTAGATTTTTACTGCGACTACTGTGACCGATCCTTCACCAGAAagtacaatttacaaaatcaTATAGAAAAGTTTCATAACAGCGTAGTCAATGGCACTTGGAAGTGTCATATTTGTCAACAAAAGTTTGCGAGCCAGCCCGGCTTGCAAGTGCATCTGTCGAAAGGACACAATTCACACAATGAAGTTTTACCCGAATGCGATATTTGTGGTAGAGTATTTGCacgcaaacaaaacattatatcGCATATGATCACTATGCATTTGCAAGGGTCGTCACACGAATTGAAATGCAAAGTGTGTGATAAGTCATTCGCTACAGATAGAAATCTCCGGAGACATGTTAATGTGATGCATAATCCTGATACAGAGAATTTAACTTGTAATATTTGCCATATGGTGTTTAAAAGCAAGGCTAATTTAAAGTCGCATTTGCAGATAGGTCATAACAGTGATAATGAGCCAATTAATAAATGCGCTATTTGCAACGATAGAGTCTTTTCTGAGACTAGAAATCTGAGGAGACATATGGAAAATTGTCATGGGgacaaacaatattacaaGTGTGACTTATGTCCTAAAGTGTACCCATCCAATCAGAGTTTGAAACGTCACACGCGAAATACTCACTACACACGAGATGTCAAAATAGAGAAGACAGACTCCACTATCTCCAATAATTCTTATGAATCAGAAGACGAATATACATGCACCACGTGCAATGATATATTCTTCGAAGAATCTGACTTAAGACATCATATAAAAACAGAGCATTCTTTCGAAACTTTCTATAGATATTGCAAGAGTTATCTagaaaaaactaattttaaagatcAGATAACGAACTGTGAGTTCTGTTATATGGCTTTCGTTAATGTTTCGGAGTTGAAGCAGCATATGAAAACTGTACATTGCATTGAGTATAGCTTTGCGAAATGCAATGTGTGTTTTGGGAACTTTTTCAGCGATGCAGCTATTGTTGAGCACAAAAAGATATGTCTGCCCCCGCCTAACGTACACTCTTGTAGTCATTGTGATAAACTATTCACTGATGTCTTAAGTCTTGACTTCCACACAAGAATTTTCCATCCACAAGCTCAAGTAGCAGATTCTAACATATCCTCAAGCAATCTTGATGACCAAGAAGGTAATGCGTTGGAGAATCATTTGGCAACGCAGCACTTGGCAGAAAATGAGGTTTATAAATGTAAACCGTGTGATCTGATACTCACTGGCATTAGCAATTTTGAGACACACAATATTGAAAACCATTCGAATGATTTAGCCAAAATTGACCCTGCTAAAATACCTTCTTGTGTGATATGTATGAAGTTATTTAGCTCAAGAAAAACTCTGAAACGGCACATCAAGAAATTCCACTTAGAATTTCTGCCCGAAGAACTTCTGAACTGCGCTAAGGAATTTCTAACCATTGACTGCGAGAGTTGCATCAGAAAACTGAACTCCACCACCTATATCAACATTTACAACGTAACGAAAAGCAGAAACGCAATCATTTTCAAATGCAAAGCATGTAAAAATACAGTTGATGCTTTGGAATTCGCTGTGCAAAAGCAGAGATTGAGATTTGGCACTAATAAAACCAAGATGGTGTTGAGCGAACTTTGTACCACTGAAATGAGTGATACAGAACCTGGGTATTCGGGGTCTAACGTGAACCATGAACCAGTGAGCACAACAAATGACAATATCAAGATTGAACTGCAGGAACTACTGGATGAAACACAGATTAAAGATGAGCCGATGTCGCCGTAG
Protein Sequence: MYMNHLDFYCDYCDRSFTRKYNLQNHIEKFHNSVVNGTWKCHICQQKFASQPGLQVHLSKGHNSHNEVLPECDICGRVFARKQNIISHMITMHLQGSSHELKCKVCDKSFATDRNLRRHVNVMHNPDTENLTCNICHMVFKSKANLKSHLQIGHNSDNEPINKCAICNDRVFSETRNLRRHMENCHGDKQYYKCDLCPKVYPSNQSLKRHTRNTHYTRDVKIEKTDSTISNNSYESEDEYTCTTCNDIFFEESDLRHHIKTEHSFETFYRYCKSYLEKTNFKDQITNCEFCYMAFVNVSELKQHMKTVHCIEYSFAKCNVCFGNFFSDAAIVEHKKICLPPPNVHSCSHCDKLFTDVLSLDFHTRIFHPQAQVADSNISSSNLDDQEGNALENHLATQHLAENEVYKCKPCDLILTGISNFETHNIENHSNDLAKIDPAKIPSCVICMKLFSSRKTLKRHIKKFHLEFLPEELLNCAKEFLTIDCESCIRKLNSTTYINIYNVTKSRNAIIFKCKACKNTVDALEFAVQKQRLRFGTNKTKMVLSELCTTEMSDTEPGYSGSNVNHEPVSTTNDNIKIELQELLDETQIKDEPMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407798;
90% Identity: iTF_00407798;
80% Identity: iTF_00407798;