Basic Information

Gene Symbol
XBP1
Assembly
GCA_951394245.1
Location
OX596172.1:1853656-1855479[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4 4.4e+03 -1.8 0.0 15 25 26 36 25 37 0.77
2 3 3.8e-17 4.1e-14 52.7 6.1 2 52 41 91 41 93 0.97
3 3 0.00014 0.15 12.5 1.5 33 55 86 108 85 113 0.90

Sequence Information

Coding Sequence
ATGAGTGCTCCGATCATCATCACTGTGCCCAACAACTATCTGGGAATGGAGGAGGAGAGCGTGGTGCTCGACGTGTCTCCTGCTCCCTCCAGGAAGCGCCGGCTGGACCACTTGACTTGGGAGGAGAAGATGCAGAGAAAGAAGCTGAAGAATCGCGTCGCGGCGCAGACATCACGCGACAGGAAGAAGGCGAAAATGGATGATATGGAAGATCGTATCAAGGGATTGGAGGACGTCAACAAGAGGTTGATCAGTGAAATGGAGAGCTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACCAGTCGCTTCGCAgcgaggcggcggcgcggaCCGTCGCGGGAGCCCTAGGACCAGCAGAGTCCCCTCAGCAGAAGGCAGGGCCCCCGCCGGCGCTCCGCGCGGCTCGCCTGCTGCTGGCGATGTGTCTCCTCTCTCAGACATCCTCGCCCACCTCGAGTCCGAAGAGTACCTCGACACCCTCCATCAACTTGCAGAGTCCCTCATCAAAGAAATTGATGCAAGTGCTGCAGGAGAGACTCAAAATGACCCAATCCGGGACACTAGAGAGTGccctaaaacaaataaagtggTGGGGCCCGCAGCAGAGCACCTGGAATCCAGTGAAAGTCACATCATAG
Protein Sequence
MSAPIIITVPNNYLGMEEESVVLDVSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDDMEDRIKGLEDVNKRLISEMESLKALNERLLSENQSLRSEAAARTVAGALGPAESPQQKAGPPPALRAARLLLAMCLLSQTSSPTSSPKSTSTPSINLQSPSSKKLMQVLQERLKMTQSGTLESALKQIKWWGPQQSTWNPVKVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00818104;
90% Identity
iTF_00406454;
80% Identity
-