Calb003008.1
Basic Information
- Insect
- Cyclophora albipunctata
- Gene Symbol
- GATA-B
- Assembly
- GCA_963082685.1
- Location
- OY720113.1:12391335-12400151[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9 2.4e+04 -6.0 7.6 1 15 34 48 34 55 0.83 2 3 9.1e-18 2.5e-14 53.0 3.9 1 34 247 279 247 281 0.97 3 3 8.5e-19 2.3e-15 56.3 7.3 1 34 316 348 316 350 0.97
Sequence Information
- Coding Sequence
- ATGACGGGCACTACTGGAAGTACCAGGCGCAGCGTGGGGCTGCGCCAGGCGGCGAGCTGCACTTGTGGTGCGGCAAGTTCGCTGCATCCCCTGAGCGCCTGTCCCAGCTGTGAGGAGTGTGAGCCCCCAAACTGGCGGCAGTGCGGGCGCGCGGCCTGGATGTGCCCGCGGAGGGAGGGCGGGGTCTTGTCGGCGGTTGTTATGTGGAGCGTCGCTTGTCCTCGAGCTGTTATCAGCGGCGCGTGTGTGGGTGACGAGCCAGTGAGCACGGTGTACTTAATTGTCACGTTCGTTATGTTCAGAAGcagcggcggcgccggcggcgggggcggcgggggAGGGGGGTACTCGCGCTGCGCCTACACCACCAGCTCCTCGCCCTTCGCATACGCCAGCCCCGACCTCACCACGCAGGCGCAGCTCTGGACCAACCAAGGCTCCCCGAGCTATGTGGGGTCGAGCGGCGGCAGCGTGGTGCTGAGCGAAGAGTACGCGGAGGGCGCGGAGTGCGCGACGCCCGGCACCAGCTCGCTGCCCGCCTTCAGCTCGCGCTTCGGCGGCGTGTTCTCGTGCGCCACCTCGCGTCCCTCCACCATCTACGGCTCCTCGGCACTGGCGGTCAACGCGTACACGCACCAGGACGTGTGGAACCTGGAGTCGACGCGGCGGCCGCAGCTGTCCGCCGCCGCCAGCCTCTCCGCAATCGAGATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCGATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCACgccgcgcacgcgcacgcCGCGCCCGCACACGACATGGGCACCAAGCGGCCCGGCACGGCGTGCACCAACTGCCACACGACCACCACCTCGCTGTGGCGGCGCAACGCTAACGGCGAGACGGTGTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATCCAGACTAGAAAACGGAAACCCAAGAACAGTATGAAAACTGAGCGGAATTTAAAAAACGCAATCCAAAGAACAGTAAACTCCGGCGTTAAGATGGAGACCTTATTGGAGGGCGGGCGTTCGTCGTCGCTGTACTACATGGCGCACCCGCTGAAGGAGGAGGGCGAGCTGGCGGCGGCGCACTACGAGGAGGAGTACCGGCGCGCGCTGGAGCCCGACCGCCTGGAGCGCCCCGCCGCCGTGTCGCTCGCCAGCTGA
- Protein Sequence
- MTGTTGSTRRSVGLRQAASCTCGAASSLHPLSACPSCEECEPPNWRQCGRAAWMCPRREGGVLSAVVMWSVACPRAVISGACVGDEPVSTVYLIVTFVMFRSSGGAGGGGGGGGGYSRCAYTTSSSPFAYASPDLTTQAQLWTNQGSPSYVGSSGGSVVLSEEYAEGAECATPGTSSLPAFSSRFGGVFSCATSRPSTIYGSSALAVNAYTHQDVWNLESTRRPQLSAAASLSAIEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHAHAAPAHDMGTKRPGTACTNCHTTTTSLWRRNANGETVCNACGLYFKLHNINRPLAMKKDSIQTRKRKPKNSMKTERNLKNAIQRTVNSGVKMETLLEGGRSSSLYYMAHPLKEEGELAAAHYEEEYRRALEPDRLERPAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -