Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: -
Assembly: GCA_963082685.1
Location: OY720120.1:3723368-3739392[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.049 3.7 8.6 0.2 1 23 28 50 28 50 0.97

2 10 0.00096 0.073 14.0 1.9 3 23 58 78 56 78 0.94

3 10 5.6e-06 0.00042 21.0 3.2 1 23 84 106 84 106 0.96

4 10 3.2e-06 0.00024 21.8 3.2 3 23 114 134 113 134 0.97

5 10 7.2e-05 0.0054 17.5 5.4 3 23 214 234 213 234 0.99

6 10 1.8e-06 0.00014 22.5 0.6 3 23 241 261 240 261 0.97

7 10 0.0001 0.0079 17.0 7.9 1 23 313 335 313 335 0.97

8 10 0.92 70 4.6 2.1 3 21 345 363 345 364 0.95

9 10 1.5e-05 0.0012 19.6 6.0 1 23 420 442 420 442 0.98

10 10 4.7e-08 3.6e-06 27.6 1.8 1 23 448 470 448 470 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.049	3.7	8.6	0.2	1	23	28	50	28	50	0.97
2	10	0.00096	0.073	14.0	1.9	3	23	58	78	56	78	0.94
3	10	5.6e-06	0.00042	21.0	3.2	1	23	84	106	84	106	0.96
4	10	3.2e-06	0.00024	21.8	3.2	3	23	114	134	113	134	0.97
5	10	7.2e-05	0.0054	17.5	5.4	3	23	214	234	213	234	0.99
6	10	1.8e-06	0.00014	22.5	0.6	3	23	241	261	240	261	0.97
7	10	0.0001	0.0079	17.0	7.9	1	23	313	335	313	335	0.97
8	10	0.92	70	4.6	2.1	3	21	345	363	345	364	0.95
9	10	1.5e-05	0.0012	19.6	6.0	1	23	420	442	420	442	0.98
10	10	4.7e-08	3.6e-06	27.6	1.8	1	23	448	470	448	470	0.97

Sequence Information

Coding Sequence: ATGGACCATGTGGTGAAAAAGAATATGGTAGCCAAGAACAAGTTAGCTTTAATAGTGAAGTTGCCGAAGGGTGAGACTCAGTACTGCTGTGTCCAGTGTCCGGTCCGGTCTAATGTCAAGGAGGAGCTGGAGATACATCTGCTGGTCCATAATAATGAGTACAGGCATTTGTGTCCTGTTTGCGGGACTGGATTGAAACGGCGAGAGCATATGGAACGACACATGTTTGAGCACCGACAAGTGCGGTCCCATGTGTGTGAGGTGTGCAACAAGGCGTTCAAGCGCAAGGAGCACCTCAACATCCACCGGACCATACACACCGGAGACAAGAACGAGATATGTGTACTGTGTAATAAATCATTCTACCGCAAAGATCATCTCCAGAAACACCTCCAAACCCACGGCAAGCATTTGGCCGAACAAGGCATGGTGCTGTTGACGGAACAAGAGCTGATGAATATTAAGGCGGAAGCTGTTGATATACCGTCTGAGGACAGTCAGGACCAGGAGTCGAACATGGATAGTCATGAGGATTACCATGATATGCAGGAAAGCATGGAGTCAGTAGAGTGTAACGTGAGCATAGTGCCCGAACCAGAAGTGACGTCAGTGCCTACGTCACACGACAGGCCGCACGGCTGTCACCTGTGCGAGAAGACGTACAAGAGGAGAGACCATTTGAAACTGCACCTTCAGACTCATCAGAAGAAGGATAAGATCTGCACTGAGTGCGGGAAAGcGTTCCACCGTCAGGACCAGCTATTGGCTCACATGGGGACCCACTTCAACACGTATACCAACTGTGAAGAGGATGATAAGGCGACGATACAACACTTCTTGGTGACACAGGACTCTGAGCTCAATGACTATGACCATGAAGAAAGTCTCCTCGTCCCCCGCGCCCTGCAGCCGCGGGCCGCGCCGCCCGAGCGGCGCCACGAGTGCGAGGTCTGCCACCGCAAGTTCAAGAGGAAACAACACCTCAAAGTGCACTACAATGTACACACCAAGGGACAACAGCCCAATATATGGTGCTCCAAGTGCTTTCAAGGTTTCTTCATGAACTCGGACTTCGAGAGCCACCAGTGCGCGCCGCAGAGCCCGCCGGCGGAGGAGCTCACCGACGGCCCGCAACCAGACGCCATCAAGGAGAACGAGTACCCGCTCGAAATATTACCCATGGAAGAGCCCAAGGCGGACGAGTCGCAGTACATCCACATCCGCGACGAGAGCGCCATCCCCTCGCCGCGCATCGTGTACGTGTGCAAGTACTGCCAGAAGCCCTTCCGCCGCAAGGACCACTACAAGATTCACCTGCACATACACACCGGGATCAAATCCTTCTTCTGTCCCGAGTGTGGGAAAGGGTTCTACCGCAAAGATCACCTACAGAAGCACATACAAGTGCACTCGAAGCCGAAGCTGAAGATAAAGAAAGACATTCCGGGCCTGTTCCCCATCAACATGCTGCTGAAGAAGGATGTCAAGCCGGAGATCACTATACATGCGCCATCAAACACAAAGCTGCGAGTGCCCCTACAAATCAAGGTGCCATACCAAGTGGTGATGTCTATGGACAACGGAGAGCAGCGAGCGGTCACCGTCGACCCGCAGTCCTCAACATCCGACGAGGTGATCGGTATTTAG
Protein Sequence: MDHVVKKNMVAKNKLALIVKLPKGETQYCCVQCPVRSNVKEELEIHLLVHNNEYRHLCPVCGTGLKRREHMERHMFEHRQVRSHVCEVCNKAFKRKEHLNIHRTIHTGDKNEICVLCNKSFYRKDHLQKHLQTHGKHLAEQGMVLLTEQELMNIKAEAVDIPSEDSQDQESNMDSHEDYHDMQESMESVECNVSIVPEPEVTSVPTSHDRPHGCHLCEKTYKRRDHLKLHLQTHQKKDKICTECGKAFHRQDQLLAHMGTHFNTYTNCEEDDKATIQHFLVTQDSELNDYDHEESLLVPRALQPRAAPPERRHECEVCHRKFKRKQHLKVHYNVHTKGQQPNIWCSKCFQGFFMNSDFESHQCAPQSPPAEELTDGPQPDAIKENEYPLEILPMEEPKADESQYIHIRDESAIPSPRIVYVCKYCQKPFRRKDHYKIHLHIHTGIKSFFCPECGKGFYRKDHLQKHIQVHSKPKLKIKKDIPGLFPINMLLKKDVKPEITIHAPSNTKLRVPLQIKVPYQVVMSMDNGEQRAVTVDPQSSTSDEVIGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -