Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: -
Assembly: GCA_963082685.1
Location: OY720120.1:143226-148752[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.084 6.4 7.9 0.0 2 23 18 39 17 39 0.96

2 18 3.5 2.6e+02 2.8 0.4 1 19 67 83 67 90 0.70

3 18 0.00071 0.054 14.4 0.0 1 23 109 131 109 131 0.95

4 18 0.86 66 4.7 0.0 5 23 139 158 136 158 0.93

5 18 0.045 3.4 8.7 0.0 3 20 261 278 259 280 0.92

6 18 0.022 1.7 9.7 2.3 3 23 287 307 286 307 0.96

7 18 5.3e-06 0.0004 21.1 1.6 1 23 311 333 311 333 0.99

8 18 4.6e-05 0.0035 18.1 0.2 2 23 340 361 339 361 0.96

9 18 0.00016 0.012 16.5 0.2 1 23 367 390 367 390 0.96

10 18 0.059 4.5 8.4 1.6 3 23 397 418 396 418 0.95

11 18 4.4e-05 0.0033 18.2 0.9 1 23 425 448 425 448 0.98

12 18 6.5e-05 0.005 17.7 0.2 2 23 453 475 453 475 0.94

13 18 0.0002 0.015 16.2 2.3 1 23 480 502 480 502 0.96

14 18 0.47 35 5.5 0.3 3 23 514 533 513 533 0.92

15 18 0.11 8.4 7.5 0.3 2 23 541 563 541 563 0.91

16 18 1.9 1.4e+02 3.6 0.1 3 23 571 592 571 592 0.93

17 18 0.62 47 5.1 0.2 6 20 600 614 599 616 0.93

18 18 0.058 4.4 8.4 1.8 2 22 649 669 649 669 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.084	6.4	7.9	0.0	2	23	18	39	17	39	0.96
2	18	3.5	2.6e+02	2.8	0.4	1	19	67	83	67	90	0.70
3	18	0.00071	0.054	14.4	0.0	1	23	109	131	109	131	0.95
4	18	0.86	66	4.7	0.0	5	23	139	158	136	158	0.93
5	18	0.045	3.4	8.7	0.0	3	20	261	278	259	280	0.92
6	18	0.022	1.7	9.7	2.3	3	23	287	307	286	307	0.96
7	18	5.3e-06	0.0004	21.1	1.6	1	23	311	333	311	333	0.99
8	18	4.6e-05	0.0035	18.1	0.2	2	23	340	361	339	361	0.96
9	18	0.00016	0.012	16.5	0.2	1	23	367	390	367	390	0.96
10	18	0.059	4.5	8.4	1.6	3	23	397	418	396	418	0.95
11	18	4.4e-05	0.0033	18.2	0.9	1	23	425	448	425	448	0.98
12	18	6.5e-05	0.005	17.7	0.2	2	23	453	475	453	475	0.94
13	18	0.0002	0.015	16.2	2.3	1	23	480	502	480	502	0.96
14	18	0.47	35	5.5	0.3	3	23	514	533	513	533	0.92
15	18	0.11	8.4	7.5	0.3	2	23	541	563	541	563	0.91
16	18	1.9	1.4e+02	3.6	0.1	3	23	571	592	571	592	0.93
17	18	0.62	47	5.1	0.2	6	20	600	614	599	616	0.93
18	18	0.058	4.4	8.4	1.8	2	22	649	669	649	669	0.93

Sequence Information

Coding Sequence: ATGGTAGGTATTCCCTTAGTTAACTTGGAGAGGTTGAATGTAGACCGATTAAGATGCGCGACGTGCCCCGCGGTACTGGCGGACCCGGTGGCGCTGGAGCAGCACGGCCGCCGGCACGCCGCGCAGCAGCGCCTGCAGTCACCTCGGGTCATGCACCATttcaagAGTGCAGTAGTGGCAATGGACCGAGTGTCTATATTCAAGTGTGGCATGTGCTCGCGAGGCTTCCTGGACAATAATGCCCGTCACCAGCATGGGATGGCTGTGCATGGCCACACTCAACTACGATATAAAGAGAATAATAAAAACGGTATAGTGAAGCCATTCAAATGTGAGGAGTGTGGGTTGCGGTTCGCGGCGGCGAGCTCGCTGGCGGCGCACTCGGTGATGCACCGGCCCTTCGAGCACGTGTGCGAGTGCGGCGTGGGCTACTTCCGCGCGGCCGACCTGGCGGCGCACGCGCGGCTCGTGCACGCGCGCGACCCGCCCGACCCGCCCGCCGCCCTACGCTTCGCCGGGAACAAACTCAAGCGGAAGTTTGCGCTGTCCACCCGCAAACATAGAACTAATGCACCCAACAAAACGAATCGTCAAACTAATAAATCCAAGTGGAAGGTGCGTGCGAAATCTGGCGACAAAGATAAAGTACGGCGTGCGAAATCTGGCGTCAAAAATAAAGTACGGCGTGCAAAGTCTGAAGGCAATGAGAAAGGACGAACTGCGAAATCTAGTGGCAAAGAGAGCGGCTTTCGCAGGATAAGGAGGGGCGCGGAGCTGGCGTGCGAGCTGTGCGGCGCGGCGTTCAAGTACGCGGCGGACCTGTGGCTGCACGCGTGCGCCTCCGGGGCGCGCCGCGCCTGCGCCCAGTGCCCCGCCACGTTCAAGAACTTGCACCAGCTCAGCGTACACCGCCATTACCACAAACAATCGTTCAAATGTAAGTATTGTAATAAAGTCTCCAATTCAAAGTCGTCCCTAGCGATCCACGAGCGCACTCACACGGGAGACAAGCCGCTCGAGTGCATGTTCTGCGACAAGGCGTTCGCGGACCCGTCGGCGTTCCTGCGCCACAAGCGCATCCACCTCGGCATCAAGCCGTACCGCTGCGAGCGCTGCCCGCTCGCCTTCTCCGACAAGAGCGCGCTCCTCGGGCaccgccgcgcccgccactcgcgcgccgcgcgcgcctgCCCGCGCTGCGGCAAGCGGCTCGCCTCGCAGTACAGCCTCAACTGCCACGTCCAGAAGTTCCACTCCGACCTCCACATTTATTACGAATGCGATTACTGCGGCAAGCGGTTGGCGCGCAAGACCGACGTAAAGACGCACATACAAAAATACCACGTTGATAGGAACGAGTGCCCGATCTGTCCCAAGACTTACTGTTCCGCGGGGGATCTCAAAGCGCACGCGATCTCGAAACATCCTCGTTCCGTTTTCTTATGCGATATCTGTCCAACAATAACCAAGCACAAAAGATCACTCGTGAAGCACATGAAAACTCATGAGGAGAAAACTCGAGTCAAACAGTGGAAGTTCTGCCCTATCTGCGACAGAAGCGTCGGCGAACAATCGCTGAAGGAGCACATCGCGCACCACTACAACAAGAGGGCCGAGCGGGAATGTAAGATTTGCTACAAGCAGTTCCTGACGCCGGTGGCGCTGCGGCACCACGGCGCGGTGGAgcacggcgcgcgcgcggcgcacTGGTGCGACGagtgcggcgcgcggcgctggAGCCGCGCGGCGCTGCGGCGGCACGTGCTGCGCGCGCACCTGCAGCCGCGCTACTGCGCCTGCGGCCGCTGCTTCGTGTCGGAGGCGCGCTACCGGCGGCACCGCGCGCGCTGCGCGCCGCTCGCCTGCCCGTggtgcgcgcggcgcgcggcgggcgcggcgctgcGCGCGCACATGGCGCGccacgccgcgcgcgcgccgcgcccgcgctgcgCACACTGTGCCGCCAACTTCAAGAGCAAGCCTCACCTCATCAAGCATTTCAAAACGCAAGGAGATCCACTATCACCAAAACTGTTCACCAGTGTCCTTGAGAAAGTCTTCCGCAAGCTCGCAGCACGCTGGAAAGCCAAAGGAATCCTCATCGGTGGAGCAAGGTTAACTAACCTACGTTTCGCCGATGATGTCACCCTGTTCGCTTCCTCAGCCTCAGACCTACAGATGATGCTACAAGACCTCAGCGATGCATGCCTTGAGGTTGGTCTGAAGATGAATATGTCAAAGACCAAGCTTATGACCAATTGCCAACAACATCCGGTGACAGTGAGTGCAGAAGTTATGCAGTATGTCCAGGAGTACATTTACCTGGGCCAAATAGTCTCCTTTCAGTCCAGACAAGATAAGGAGGTCACAAGACGTACCGAAAACGCCTGGAGGAGCTATTGGGCCCTAGGAGAACTCATAAAGGGCAACCTTCCCATCTCGCTCAAGCGAAAATTAATGGACATGTGCATACTTCCTGTACTCACATATGGCGCACAGGTTTGGTCTTTGACAGATTTTCAAAAGTCcagtctcaaggtttgccaaagGGCGATGGAACGAAGTATCTTGGGTGTCAAGTTAACGGACAGAATCCGAAACACCGAACTACGTTCCCGCACCAAAATCGCCGACGTAGGTCTTAAAGCTGCTGAGCTCAAATGGAGCTGGGCAGGACATGTCTGCcgcaggcctgatgagtcttgggcaaaaattGCCACCATGTGGAACCCAGACTCTAGCAGAAgacgccgcggcagaccaaaacggagatggcgagacgagcttgacatgtacttgtccggttggtgtcaggaagctcttgacagagctgaatggaagaaatggggggaggcctttgcccaacaatgggacacttag
Protein Sequence: MVGIPLVNLERLNVDRLRCATCPAVLADPVALEQHGRRHAAQQRLQSPRVMHHFKSAVVAMDRVSIFKCGMCSRGFLDNNARHQHGMAVHGHTQLRYKENNKNGIVKPFKCEECGLRFAAASSLAAHSVMHRPFEHVCECGVGYFRAADLAAHARLVHARDPPDPPAALRFAGNKLKRKFALSTRKHRTNAPNKTNRQTNKSKWKVRAKSGDKDKVRRAKSGVKNKVRRAKSEGNEKGRTAKSSGKESGFRRIRRGAELACELCGAAFKYAADLWLHACASGARRACAQCPATFKNLHQLSVHRHYHKQSFKCKYCNKVSNSKSSLAIHERTHTGDKPLECMFCDKAFADPSAFLRHKRIHLGIKPYRCERCPLAFSDKSALLGHRRARHSRAARACPRCGKRLASQYSLNCHVQKFHSDLHIYYECDYCGKRLARKTDVKTHIQKYHVDRNECPICPKTYCSAGDLKAHAISKHPRSVFLCDICPTITKHKRSLVKHMKTHEEKTRVKQWKFCPICDRSVGEQSLKEHIAHHYNKRAERECKICYKQFLTPVALRHHGAVEHGARAAHWCDECGARRWSRAALRRHVLRAHLQPRYCACGRCFVSEARYRRHRARCAPLACPWCARRAAGAALRAHMARHAARAPRPRCAHCAANFKSKPHLIKHFKTQGDPLSPKLFTSVLEKVFRKLAARWKAKGILIGGARLTNLRFADDVTLFASSASDLQMMLQDLSDACLEVGLKMNMSKTKLMTNCQQHPVTVSAEVMQYVQEYIYLGQIVSFQSRQDKEVTRRTENAWRSYWALGELIKGNLPISLKRKLMDMCILPVLTYGAQVWSLTDFQKSSLKVCQRAMERSILGVKLTDRIRNTELRSRTKIADVGLKAAELKWSWAGHVCRRPDESWAKIATMWNPDSSRRRRGRPKRRWRDELDMYLSGWCQEALDRAEWKKWGEAFAQQWDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -