Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: -
Assembly: GCA_963082685.1
Location: OY720137.1:4297508-4299820[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-07 0.00011 22.2 0.0 1 38 19 56 19 62 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-07	0.00011	22.2	0.0	1	38	19	56	19	62	0.92

Sequence Information

Coding Sequence: ATGCCCCGAAAATATAAGCGTAAGATTGGCGTCCAACCACGTGTCATTACTTGGACCGAGGAAACATTGGCTGCAGCTATAGCAGAAATGCAAGATAGGCAAATCAGCATTAATGACATATCCAGAAGACATGGAATACCACCTAGGACTTTACGCCGCCGGTTTGctacacaaaataataataaaataccgtTAGGCAAACCACCAATTCTTGGATACGAAAATGAGCGTCGGCTTGTCGCTCATATACAGCAGCTTGAAAGATCCGGGTTTCCCCCTGACAGGAAAACTGTCCGCCGTTTAGCATACGAGTTTGCGGagaaattaacaataaaacataattttaacacAGACACGCAAATGGCTGGAACTGATTGGCTTCAGAGCTTTATAGAAAGGCATCCTATATTATCTATTAGACAAGCCGAAGGTCTCTCAGTGTCACGTGCATTAGCTCTAAACAGGGCTGAAATCAACAGCTTCTACGACTTACTTACAGAAGTTCTGGAACAAAATGATCTTTTGGACAAGCCCGACCGTATTTTTAACATGGACGAGACAGGTGTTCAAATGAACAACAAAGTTGGTAAAGTTTTAGCTACGAAAGGATCGAGGTCTGTTCACTCAATCACTTCAGGCGAAAAAGGTGAAACATTGACGGTAGTAGCTTGTTGCAATGCAACGGGTAATTATCTTCCTCCGGTGGTGATAATCAAAGGAGTGCAAAAAAAAGATGAATTTATGGATGGGTTACCACCTGGTTCGAAAGTCTACATGAATAGAAAATCTGCGTATATAAATGCAGAATTATTTATGACATGGCTGAAGGAGCATTTTGCCAAAATGAAACCCCAAGGAAAAGTTTTACTCATTTTAGATGGCCACAGCTCACATTCTTCTGCCATAGATATGCTAGAATTTGCCAGAGCTAATGATATTATTCTCCTTTGTTTGCCTAGCCACACTACATCCGCACTCCAACCTCTAGACAGAGCGGTGTTCAAGCCTTTCAAAACTTTCTTTACTGCTGAAACTAATCTTCATATGCGACTAAACCCACAAAAAAGAATCAATCGTCAACAATCTGGCAAATTGATTGGAAAAGCATGGATTCGAGCAGCAACTCCCGCTAACGCTATATCCGGATTCAGAGGCAGTGGAATATATCCAATTAATTATAACGCTATACCAGAAAGTGAATTTTACAGCGGCAATGTAACAAACAACACACCGGCTGAGATTCCCAGCACCTCAAATGCGACACCCGATATCCGTGCTAGCCCGAGTTTACTAGATACTTGTAACATTGAAACGATAATTGCAGCTCAATCACCGATCTCAACCGATGATTACCTTATTACAGATAATATTGCAACTACATCTAATTTGGCAGATGAAAACAATCAGGAACCCACAGATAATTTGGTAAATTCAGATAGCCCAGCAGCGGAAAATAACGTACTAGTCGCAAACAACTCGTCAGTTACTTCTTCTACGGAAAAAGAAACTCCGTCGAAACTGTTACATGAATCGTTGCCAATTCCAACGCTTCCAACTCCTTTTGCAAAGAGGGGTAAACAAGGTGCTGAAGTATTAAATTCGAATGAAAAAATTATGGATAAAAAGAAAGGCAAAGCTACGAAAGGAATACCAGTGAAAAGAACAAAAAAGAACCAAAAAGAAGACAAACAAAAAGTTGATTTGGAAACGAAGAAAGCCAAGAATAACAAGCAAAAAAGTGGCTATAATTCAAGCGATACAGATACAGACGGTAATGTTCAGGataaagaagaaaatattaataagatacaagacaatgataaaaataaatctaaaagaaaatataggaAACTCTCAGCTATGAAAGTATACAGTTCTAGTGAAGAtgataataaagaaaacgaagACAGTGACggtgaaattataaaaaaaatattgagaaagaaagaaaaacacGCCAAAACCAAAGagataacaaaaaaaacaaattttgatttaatatatAGTTCTAATGATGAAAATTGCGGAGAACATGATATGAATGTAGATGAAGATCATTGCGTGGAATGTCTTGACTATTATAGGAACACCAAATCCAAAGTAGATTGGATCCAATGTGTTATGTGCCAAAGTTGGCTTCATGAGACGTGTACATTATATCGTAATTATTGTAACAAATGTGGGCGAATCAAGATTATTGCTGCAAAAATGACTAAATAA
Protein Sequence: MPRKYKRKIGVQPRVITWTEETLAAAIAEMQDRQISINDISRRHGIPPRTLRRRFATQNNNKIPLGKPPILGYENERRLVAHIQQLERSGFPPDRKTVRRLAYEFAEKLTIKHNFNTDTQMAGTDWLQSFIERHPILSIRQAEGLSVSRALALNRAEINSFYDLLTEVLEQNDLLDKPDRIFNMDETGVQMNNKVGKVLATKGSRSVHSITSGEKGETLTVVACCNATGNYLPPVVIIKGVQKKDEFMDGLPPGSKVYMNRKSAYINAELFMTWLKEHFAKMKPQGKVLLILDGHSSHSSAIDMLEFARANDIILLCLPSHTTSALQPLDRAVFKPFKTFFTAETNLHMRLNPQKRINRQQSGKLIGKAWIRAATPANAISGFRGSGIYPINYNAIPESEFYSGNVTNNTPAEIPSTSNATPDIRASPSLLDTCNIETIIAAQSPISTDDYLITDNIATTSNLADENNQEPTDNLVNSDSPAAENNVLVANNSSVTSSTEKETPSKLLHESLPIPTLPTPFAKRGKQGAEVLNSNEKIMDKKKGKATKGIPVKRTKKNQKEDKQKVDLETKKAKNNKQKSGYNSSDTDTDGNVQDKEENINKIQDNDKNKSKRKYRKLSAMKVYSSSEDDNKENEDSDGEIIKKILRKKEKHAKTKEITKKTNFDLIYSSNDENCGEHDMNVDEDHCVECLDYYRNTKSKVDWIQCVMCQSWLHETCTLYRNYCNKCGRIKIIAAKMTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -