Calb000463.1
Basic Information
- Insect
- Cyclophora albipunctata
- Gene Symbol
- jarid2b
- Assembly
- GCA_963082685.1
- Location
- OY720111.1:3369896-3375231[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-20 6.4e-17 62.2 0.0 6 89 716 797 712 797 0.92
Sequence Information
- Coding Sequence
- ATGTCCTGTGAAGAACTTCGCGGCCTGACTTCTGCCCAAGAATCCAGTACTAATACTCCGCCGCCCCCAGTAGCTAGTTCTACTCCAAAAATGAACCCAGTAAAGAGATTGTCTCAATCTCTAAGAACTCGTATTCTAACACGGTCTTGGCGAAATGTTAGTGCTAAGAAACGTGACGGCAAGGCAAAAGGTATTCCTAATAAAGCAATCGCTAGACGTCGACAAAGCGAAGCATCGAGCATCGATGACAATAGACCTCTCAAATATTTCGTGACACAAGTGAATAAATCCAAATCCGCTCAACACATAATGAAGCCGCGACATCGTGCAAAGAAGGTCAACGCTGACTCATCATCGGAAGAGTCGTCCGCGAGCCCTAGTCCCCGGGTTACCAGGGGAACAGCAAAACGGACGCCACGCGTTGAGACTGATACTCGCAGCAAAACGATTGTCACCAAAGCTAGCAAGCGCCGTAATAGAAACACCAAGAAAATACTTCTTGCCAAAAAGAAACTTGGAGCTGGCAAAAAATCGATACCTACTAAAAACTTAGACAATAACATCACGAAACATATTGCTAAGTCAAAATTGCTGGGTACCGCTTCTGAAACCCCAACAGGGTCTAAAAGAAACTCGACAAGCGAGAACgaacataatatattgaatACGAGTGTTTTCAGAAGAACTTTACCGTTACCATCACCGATGCCCTCAACATCAAAGGAGGTCCAAATAAATAGTCCTCCATCTCCTCAACCTTCTACCAGTGGACGCATCACCCCTGAACAAAGCTCTGTTCCAGAAGATGAagatgaagatatcaaaccGTTCGAAGTGACTGTTGCGGTTGACAGGCTGACTGGCTCAATCACTCCTGTGTCAGATCATGAGTCCGATCTGGAAGAGTTGTTTGAAAGTGAAACTCCACAGTTTAAGATCCCGGAGCCACCTAAAGATCGTGGTGCGAAACCGCGCAACGAATCTGAACGGGAATTAAGGAAGCGCTGTCCGGCGTGGCGCTGTACGTCTATGGGCGTCATGGCCAAGACATCCCCTGAGGAGATCGAAAAATTCTGCGGCGAGTGCCCTCACTGCACGATGCTTCACGATGTCATGAAACTTGCCAAGCACATCCCGAGGCGTCCATCACCTGTTGCTTCTCCAGAACCGCAGCCTAGTGTTGAACGTACTGCTGAGCCTACTCCTGAACCGCAGCCTAATGTTGAAACTAGTCTTGAGCCTACTCCTGAATCGCAGCCTACTATTGAACCTACTCCTGAGCCCACTCCTGAACCTACTACTGATCATGCTCGTGATCCTACTCCTGATCCTACTCCTAATCGTACTCCTGATCCTGTACCAGAACGCGCAGTTCCCAGTACTTCTGCGAACACCAGCAATTTGGGGGTGTTTGACTTCAATTCCGAAGCGGACACTTTCAGGCCGATACCGTTCCGGAGCACCAGGAACGTCGAGTTCGATAATACCGTGGAAGAAACAGTTAACGAGCTTGAAAACGTCGAGATTGAGCAGAATGAAGGAGAAGAGACCACTGCCACCATTTCTATTGGATCACAAAAGGTTCAATTACCCGCACACATGATAACCCCGGAAAACGTGACTCTAGATTTACTTATAGACTCTCTAACTAACATAAGGACTCGTTTGAATGCTTGTAAAAGCAACTCTTCTGAGATTCCATCGACCAGTTCAGACAATGCACATTTCGACACTTCAGTCAATGACCCTGAAGTAATCCCAGAGAGTGCATCAACTAGTAAAAGAAAGACGAATTCAGCTCCTCTCGAATTTACTCCCAAGATGCCAAAGAAGGCAGGGAAAAAGACCAGATTCgcttcaaaaaaaaaaaccaaagCCATCATTACGCTCCCTGAAGTAGTTCCTACACCTCCGGCCGGCGGTATTGTTGAGGCCCCTACCTTTTATCCAACTGCTGAGGACATGAAAatggaatttattaaatatgtgGAGAGAATCGCCCCTGAAGCTTCCAAATATGGTATTTGTAAAATCACAATACCGCCAGAATTCCACCCGCCGTGTATATTAAAGAACGTGCAGTTCAAGAGCAATAATCAGTATGTTTCGTCTATGTACGACCGTTGGGGCAGCACAGCTAAGGAGATGACTGCGATCAAAGCGCATCTTGCAACTCAAAATGTCCCTTTCACAAGACCGCCTTTGTTTGAAGGTATGGAAGTGGACTTAGTAAAGTTGTACCATCTCGTACAACGGCACGGCGGCCTGCGGACGGTAatagaacaaaataaatgGGGCAAGGTAGTAGAGGATATGAATTTGAACTCGGATAGATTCAAGGCGCATTTAAAACTGGACAAGATATATATTAAACATTTGGTCCCTTATGATACTCTCACTGcagatgAAAGAGATATGTTACTCTGCAACgtcgaggatatgtggcgaaAACGGTGGCGAAAAATGAGTGAGCGTGCAGCCAACCCTCTTCACCGCAGCCGACGTATGTTAGGCGAGTCTGATTCGTCTGAAGAGGAATCGGTAACCGAGAGTGACCCAAAAGTTTTCGACGCGTTTTCCGAAACGGAAGACTGTGTCGTATGTGGCCAGAAAATGACGCTGACGCGGTACCGCAAAGTAGCAGATCAGgtCGAACAAATGCATTTCCCGAAGGGAATTCCTACTACAAAAGTTATCGAATATATATATTGGCAGAGAGTGTTGCGCGCTGACGAACATGTATGCGTGTACAGCGCTTCGTTAGACACCTCAGCGGATGGTTTAGGGTTCCCTTCCGATGGCACTAGGCCCTGGAATCTGAAACGTTTGGGAGAAAGTGCAAGCAATGTGCTTAGTGCTCTTGGACCTACACTTTCGGCCACAGTACCAGCATTACATCTATCCATGCTGTTCAGCACTAATTGCTGGCACATGGACCCCCACCACTTACCCTGGACGGAATACATGCATTCCGGGCCAGAGAAAATTTGGTATGGAATACCCGCAGAACAGGGTACCGTATTTCGCGCGGCGGTCGAACAGTTATGCCCAACTGTAGTGCAAAACAAATCCATTTGGCTGCCCTCGGACATAACAATGATTCCACCCCAACTGCTAGTGGAGAAAAGTGTATCCCTCTCCAGATTGCAGCAGAAGCCGGGAGATTACGTCATTGTGTTTCCCCGCGCTTATTCGTGCTCTATCAGCACTGGGTTTGCTGTTTCCGAGAGTTTGTATTTCGCGTCAGAGAATTGGCTGGACCAAGTAGCCAGCGTTTTCCAAGAACTTCGCGAAAACTGCGAGCCGGCTATGTTTTCTCTGGAGCAGTTGGCCTTTGGGCTAGTGAAGGGCAAAGACCCGGAGCGCGGCCACAGGTTGCTAGTCCCGGTTTTGACAGCTGAGCGAGATTATCGGCTCGAGGCTGCTGCTCGTGGACTGCAGTTGATGACTCCGGATGAGATGTTAACTCGCAATCGCCGGCTAAATGCGTCTTCGTGGCAACTGAAACGGGATGAGTGCGATATCTGTCGAACTACACTATTCTGCTCTAAGATGATCGGCGTGTCTGCGGGTCGTACGTCCCTATGCTTGAAGCATGGCCTACAACTGCAAACGCGCAACCCTCGGCCAGTCGATGAAGTAGTCTGCATCCTGTTCGTCCCTGACGACGATTTGAAGTTTCTTATCGATTATTAA
- Protein Sequence
- MSCEELRGLTSAQESSTNTPPPPVASSTPKMNPVKRLSQSLRTRILTRSWRNVSAKKRDGKAKGIPNKAIARRRQSEASSIDDNRPLKYFVTQVNKSKSAQHIMKPRHRAKKVNADSSSEESSASPSPRVTRGTAKRTPRVETDTRSKTIVTKASKRRNRNTKKILLAKKKLGAGKKSIPTKNLDNNITKHIAKSKLLGTASETPTGSKRNSTSENEHNILNTSVFRRTLPLPSPMPSTSKEVQINSPPSPQPSTSGRITPEQSSVPEDEDEDIKPFEVTVAVDRLTGSITPVSDHESDLEELFESETPQFKIPEPPKDRGAKPRNESERELRKRCPAWRCTSMGVMAKTSPEEIEKFCGECPHCTMLHDVMKLAKHIPRRPSPVASPEPQPSVERTAEPTPEPQPNVETSLEPTPESQPTIEPTPEPTPEPTTDHARDPTPDPTPNRTPDPVPERAVPSTSANTSNLGVFDFNSEADTFRPIPFRSTRNVEFDNTVEETVNELENVEIEQNEGEETTATISIGSQKVQLPAHMITPENVTLDLLIDSLTNIRTRLNACKSNSSEIPSTSSDNAHFDTSVNDPEVIPESASTSKRKTNSAPLEFTPKMPKKAGKKTRFASKKKTKAIITLPEVVPTPPAGGIVEAPTFYPTAEDMKMEFIKYVERIAPEASKYGICKITIPPEFHPPCILKNVQFKSNNQYVSSMYDRWGSTAKEMTAIKAHLATQNVPFTRPPLFEGMEVDLVKLYHLVQRHGGLRTVIEQNKWGKVVEDMNLNSDRFKAHLKLDKIYIKHLVPYDTLTADERDMLLCNVEDMWRKRWRKMSERAANPLHRSRRMLGESDSSEEESVTESDPKVFDAFSETEDCVVCGQKMTLTRYRKVADQVEQMHFPKGIPTTKVIEYIYWQRVLRADEHVCVYSASLDTSADGLGFPSDGTRPWNLKRLGESASNVLSALGPTLSATVPALHLSMLFSTNCWHMDPHHLPWTEYMHSGPEKIWYGIPAEQGTVFRAAVEQLCPTVVQNKSIWLPSDITMIPPQLLVEKSVSLSRLQQKPGDYVIVFPRAYSCSISTGFAVSESLYFASENWLDQVASVFQELRENCEPAMFSLEQLAFGLVKGKDPERGHRLLVPVLTAERDYRLEAAARGLQLMTPDEMLTRNRRLNASSWQLKRDECDICRTTLFCSKMIGVSAGRTSLCLKHGLQLQTRNPRPVDEVVCILFVPDDDLKFLIDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00407350;
- 90% Identity
- -
- 80% Identity
- -