Basic Information

Insect: Cyclargus thomasi
Gene Symbol: -
Assembly: GCA_026546445.1
Location: JAOTAV010000001.1:1234526-1242259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.2 5.2e+02 1.8 1.0 1 23 53 76 53 76 0.92

2 19 0.026 1.8 9.5 4.9 1 23 83 106 83 106 0.97

3 19 3.6 2.6e+02 2.7 4.3 1 23 178 200 178 200 0.97

4 19 0.0057 0.41 11.5 1.0 2 23 206 227 205 227 0.97

5 19 6.4 4.6e+02 1.9 3.1 1 23 233 255 233 256 0.94

6 19 0.084 6 7.9 2.7 2 22 497 517 496 517 0.95

7 19 0.77 55 4.8 0.6 2 23 765 786 764 786 0.95

8 19 0.056 4 8.4 0.2 1 23 889 911 889 911 0.97

9 19 0.086 6.2 7.8 3.3 1 23 951 973 951 973 0.95

10 19 6.6e-05 0.0048 17.6 4.2 1 23 981 1003 981 1003 0.99

11 19 0.023 1.7 9.6 4.3 1 23 1090 1112 1090 1112 0.99

12 19 0.38 27 5.8 1.4 1 19 1164 1182 1164 1186 0.91

13 19 0.19 14 6.7 0.4 1 23 1194 1216 1194 1216 0.96

14 19 0.0015 0.11 13.4 0.6 1 23 1280 1302 1280 1302 0.95

15 19 0.028 2 9.3 0.3 1 23 1308 1330 1308 1330 0.96

16 19 0.0064 0.46 11.4 2.6 1 23 1421 1443 1421 1443 0.97

17 19 0.00016 0.011 16.4 1.4 1 23 1449 1471 1449 1471 0.99

18 19 8.1 5.8e+02 1.6 4.0 1 23 1562 1584 1562 1584 0.96

19 19 0.065 4.6 8.2 4.5 2 23 1597 1618 1596 1618 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.2	5.2e+02	1.8	1.0	1	23	53	76	53	76	0.92
2	19	0.026	1.8	9.5	4.9	1	23	83	106	83	106	0.97
3	19	3.6	2.6e+02	2.7	4.3	1	23	178	200	178	200	0.97
4	19	0.0057	0.41	11.5	1.0	2	23	206	227	205	227	0.97
5	19	6.4	4.6e+02	1.9	3.1	1	23	233	255	233	256	0.94
6	19	0.084	6	7.9	2.7	2	22	497	517	496	517	0.95
7	19	0.77	55	4.8	0.6	2	23	765	786	764	786	0.95
8	19	0.056	4	8.4	0.2	1	23	889	911	889	911	0.97
9	19	0.086	6.2	7.8	3.3	1	23	951	973	951	973	0.95
10	19	6.6e-05	0.0048	17.6	4.2	1	23	981	1003	981	1003	0.99
11	19	0.023	1.7	9.6	4.3	1	23	1090	1112	1090	1112	0.99
12	19	0.38	27	5.8	1.4	1	19	1164	1182	1164	1186	0.91
13	19	0.19	14	6.7	0.4	1	23	1194	1216	1194	1216	0.96
14	19	0.0015	0.11	13.4	0.6	1	23	1280	1302	1280	1302	0.95
15	19	0.028	2	9.3	0.3	1	23	1308	1330	1308	1330	0.96
16	19	0.0064	0.46	11.4	2.6	1	23	1421	1443	1421	1443	0.97
17	19	0.00016	0.011	16.4	1.4	1	23	1449	1471	1449	1471	0.99
18	19	8.1	5.8e+02	1.6	4.0	1	23	1562	1584	1562	1584	0.96
19	19	0.065	4.6	8.2	4.5	2	23	1597	1618	1596	1618	0.98

Sequence Information

Coding Sequence: ATGCTTCAACAGATGTCCTCGTCGCCCGGCGCGCAGTTCGGCGAGGTCGCGAGTCGCGCGCGCCCTGCCGAAGGTCGCGCGTTCGACGCTTCGTCGGACGCCTCCTCCGACACGCCGGAGGAGGTCGACCTGCCTGAGTGCAAAATAAAACGAAACTACAACTGCACGAAATGCACGTTCTATACGCAGAACCCGCGAGCCTTCCTGGTGCACTCGCGGGACGTTCACTTCGAGAAACTCAAAATCTACGACTGCCCGCACTGCGTCTACGCCTCTCGCCACCACCAGAAGCTGACGAGACACATCAAGATGGTCCACGAGGCGACCTCCTCAAAGGAGCAGCAGACTCCGAACGCCGTCGCCGAGGCCAGCCCGAGTCAGCAGCGGGAAAAAATCGAGGATCTGCTGGAGGAGGTGGAGGAGGATGACGACGCGATGGACGCGGATGACTGCGCCGAGGAGTCTACTGAGAGGATTGCGGAGGGGGAGCCATCTGCCGCCGACGACGGCTCCAAGGGTCGGGGGGGCTACTACTCGTGCGGCAAATGCAACTACGTGACCCACATCAGATCGCGGTACACCAAGCACGTGAAGTACCACTCGATGCCGATGATAAAGTGCACCATGTGCGAGTTCCGGACGCCCTACAAGTGGAACCTGGACCGGCACATGAAGAACCACGGCGGTTCTGGCAGCTTCCACTGCTCGATGTGCAACTTCACCGCCGACATCAAGCAGAGCCTGACCGTGCACGAGATGAACCACCACACGCACCCGGTCGGGCAGCCGGCCAGCCGGCGCCGGAACCGGGTGGGCGCGAGCGACGTGACTGCCGACCCGGACGCCGGCGACGCCAGCGCGCTCATCGTCAAAGAGGAGGACGGCAGTGGGGACTCGTCGCAGGGCGCCTCGGACATGATGGGTCTTCAGTGTGCACAGAACGATAGGGATATTACCGGATGCCAAAGTGACTCAAACGAAGCTTCGATGTCTGAAAATATGATATCAAAAGATGATAGCCAACTGTCGCTCGGATCGAACGCTAATTTGGACGACAGCAAGAATCAAAAAGAAAATAAGAAGGCGCCGAGACCCATTCCACAACTTATACCTCTCACAGCTTCAACTCCGAACCAAAAATCGAGGGAGCCCTCAGGGGAACCACCCGCGAAAAAGTTCAAGGAAAACCCTGTGCCAGATTCTTCACAACCGAACCTCGCGAAAAAAATTGACAGTTTACCGAAAGAGATCAATTTTGCTCAGGCAAGCAGCGCGCCCAGGGAAACTGTTAGTCGGAAGAAAAATGAATCTTTTTTCGATCGGCTGAAAGAAAGATTGTTGACAGAAACTGGGAAAGATGGATTAATATGCAAGAATTGTGGTTTCGAAAGTAAGTGTTTATCAGAGCAATCCGTTCATGAAAAAACTTGCTTACCGCAATCGAATCGAAGCCAGTTAAATTCGTCGGGTTCGAATTTAGGATCAACGAGGTGTCAAAATTGCAGACATCGGTGCAAATCTAGCGCCGATCTAGTAGTGCACATGCAAACATGCGGATCGAACCAAAAATCTCCCGCGGAAACTAAACCCGAGCCACAAACTGCCGAAGTAAATGGTATCACGAATAGCAGCGGAGAAAAGGACGCCGAGCCACATCCCATGGAAAACGTGGTTTTCGTTTGGAACAACATAACACAGAATAAGTTCGAAACTCCTCTGGACATCAGAATAAACGATGACTGCACACTCCCAGACCACAAGAGTTTCGAGTCGGAGATAGTGGATGATAACGAATCTATGAACTTGTCGCCTAGTCAAGCCACCGGTAGAAAAGTCTTCAAATGCCCTCACTGTATGTTTTGGGCTTCTACGGCTTCCAGATTTCATGTCCACATAGTAGGCCACCTGAATAAGAAACCTTTCGAGTGCTCCTCTTGCAAATACAAATCCAACTGGAGGTGGGATATCACGAAACATATAAAATTAAAATCGGTGAGGGATCCCGAGCACGCCGAGGCGAAAGTGCTCATGACCGACGAAACTGGCCGCCGTAACTACAGCAAATACAACAGATTCATGGCTATCGCAATATGCGAAAACGATCAGTACCAATTCCATTACTTGGACCAGAACGCCGCTACCAATACAGAAATAGATGACGAATCTTTGAACGACGAAAACGCTAACTCTCCATTTGATATTCAACCGTTAAATCTACAGACATTCTCGATGGACACCAAGTTTGAAGCCGATAATAGGTTGGACGGGAAGAAACCTAAAAAGACTTTGTGGAAGTGCAAAAAATGCAATTATAAGGATACGTCGCGTGAGGCACTTCTGGAACATGTAAAGGAGCATTCTAAGCCGGAGGAACCAGAAGACAAGAATAAAAAACTGGAAAACGTTGTGGACCCTGCAGATTTAGCGTATAGATGCGGACACTGCAATCAATTGTCGAATTGGAAGCACGTTATTCAGAGACACTGTCGATTAAAGCACGACGGGATTATCAAAGTGATCACAACAGTGAAGGCGAAACCGGACCCGAATGCTGCACCCAGCGAGCCAAACGTCGAGTCATGCATCAAATGTCCATTCAAATCGAGCGACAAAAACTTAATACTCATGCACCAACGTCAACACCAGCCCTCACCACATTCCATGTTCAAATGCAGTTTGTGTCCGTTCTTCGTCAAAGACGAAGTCGAGTTAGCACAGCATTTAACTTTACACGGCGTCACCGAATCGGACGATTTCAACGCGTCCAAGGAATTCAATATGTACAAGGCCGCCGAGTCCCCGGCGCCCGAACCGGTGACGCCCGTGACTGTCACACCGGGAACGAAGCGACACAAGTGTAACGAGTGCCCCTACGAAACAAACAGCAAGTCCCAGTACATGTACCATGAACAATTCCATCGTATTTCCGCCGATACGCCGTACAAGTGTCCAGAATGTAATTATAGCGTCTCGAAGAGACACTTATTGCACCAACATATGAGAGTTCACGGTATAGTCTGCAAAAAATTCGACACAGAGGCGGAAGTGAGTTTGCCGTACCCGCTTGCTTATCGACCGGAGATAGAGGATAACGACGAATCTTATTCTAATCTTGATGACATTCCTTACGTCTGGGTATCTGCGAAGAACGAGTTTCATAAAATGTTCAAGTGCCGCTACTGCTCCTACGTTAATTCTCAGAAAAGCAAGATTCCCAATCACGAGGACATACATTGCATCAAGCCCGCCAACAACGATGTAACTTTTTACAAGTGTCTCGAGTGCAAGTACACCTGCGACGGCAAGAGCAAGCTCACCGAGCACTCAAAGACACACGGCGAGATATACGGCCGCATCTACTGCCCCGTGGACCTCGACGTGCCGGACGAGGAGCAGATTGCTAAGTTGAGAGAAGTGATCGAGAAAGGAGGCGAAACTGCGGAGGTCGACGATAGTCAAAAGGACAGCTACCATAATTACAGAGTCCTCTTCTTTTGCCAAAGGTGTCCCGCCAGGTTCTTCGACAAGTTAGAGTTGCAGAGACACGACAAACTTCATAATTTCAATTTAAATTACGCCTACAAATGCAAAAGCTGCGAGTTTTCAGTTCCGAAAGAGAGCGCTTTGACTTATCATAACCTCGTGCACACGGACGAGTACAACACGAAGTCTAAAATGCTGAAATCGACGCATAGAATACACCCGATGCATCCGGATCCTCAGCTTCAGCTCGTTCACTGCCCGCTGACGTCCGGAATAATATGGGTCACCGCCAATCCAGATAAGAAAAACGAGACCCACGCGAAAAAATCAGAGCCAAAAAATCCTCCTAAACAATATAACTGTAAGGAATGCCCAGCAAAATTCTTCAAAAATTCTGCCCTCACCTACCACATGGGGTTACACGGGGGAGACGGTGAATTTAAATGCAAATCGTGTTCCTATGCCGTAAAAAACATAGGAAACCTTGCGAAACACGAGTTGTTGCACGATATTGCAAACAAACCCCAACAGAATGCTGACGGTTATGATTCTAGCGACGACGTCGACTACAAAATACCGCTTTCCGGCACGGATTTGTTTCAAAGAAAGACGGAAGCTCAAAAAAGAGTTTTAAATGACAAAGATAAATTAGTAAAGCCGAACGACCATTTTCCACCGGTTTTGCAAGCCGACCCGCAATTCGGATATCTCATGCACGGTAATCCTGAATTTATTTACCCGACATATTTAAAAAACGGCCGACAAAAGGAAAAAAGGTACAAATGCCACAAATGCCCATCGGCATTCGAAAAACGAGAACAGTACAAAATCCACCTCTCCCTACACGGATCGAAACAGAGATATAAGTGTGAGTTGTGCGACTACTCGGTCAAATACTATGCTAATTACGTGCAACACATGAGAAAACACCAAATGAACGATGAAGCTCAAGCGGAACGTAAGAAAATTATAAACGGGTATTCGGAAGCTGAAGCAGAAAATCAAGACGCTAAACAGGAGGACGACAGCGACAATATCAAACTAGCAATAAAAACAATGCCGAAAAGGCCACCGAAAACAGATTTTCAACAATTTTCAATAAGCGATCAACAAACGCTACGTCTGCTACAGCGGAGACGCTCGATAGAGAACTCTATGAAAGAAAATACAGACACTTCTCCTGCCAAGGAGCGTAAGCTACACATGTGCTTGCTATGTCCCTATACCAATCAGCGTCAAGATGCTCTATGTAACCACTCAAGACGACACGACGAAAATGATATTAGTAGAGCCGTCGGAAACCAAAAATGTTGCTACTGTAATTTAGTAGTAGTGCAATCTCATTTCCTTCGGGAACATCTCAAAACGCACTTTATGTATCAAAAACATCTGAATCCCGAATGTTACATAGCCAATCAGAATGTAAGTTTCACTATTAAGAAAATTGCAGGTGAGGACGAAGAACCCTCTGATGATATAACTGATCTCAAGTTGGATGTAAAAGATGTTGAAGAAGTCACTAATAATGATAAAATATTTGTAAAGTTAGCGACAGGTGAATTGTGGGAACCTGAAGCGCCTTAA
Protein Sequence: MLQQMSSSPGAQFGEVASRARPAEGRAFDASSDASSDTPEEVDLPECKIKRNYNCTKCTFYTQNPRAFLVHSRDVHFEKLKIYDCPHCVYASRHHQKLTRHIKMVHEATSSKEQQTPNAVAEASPSQQREKIEDLLEEVEEDDDAMDADDCAEESTERIAEGEPSAADDGSKGRGGYYSCGKCNYVTHIRSRYTKHVKYHSMPMIKCTMCEFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTHPVGQPASRRRNRVGASDVTADPDAGDASALIVKEEDGSGDSSQGASDMMGLQCAQNDRDITGCQSDSNEASMSENMISKDDSQLSLGSNANLDDSKNQKENKKAPRPIPQLIPLTASTPNQKSREPSGEPPAKKFKENPVPDSSQPNLAKKIDSLPKEINFAQASSAPRETVSRKKNESFFDRLKERLLTETGKDGLICKNCGFESKCLSEQSVHEKTCLPQSNRSQLNSSGSNLGSTRCQNCRHRCKSSADLVVHMQTCGSNQKSPAETKPEPQTAEVNGITNSSGEKDAEPHPMENVVFVWNNITQNKFETPLDIRINDDCTLPDHKSFESEIVDDNESMNLSPSQATGRKVFKCPHCMFWASTASRFHVHIVGHLNKKPFECSSCKYKSNWRWDITKHIKLKSVRDPEHAEAKVLMTDETGRRNYSKYNRFMAIAICENDQYQFHYLDQNAATNTEIDDESLNDENANSPFDIQPLNLQTFSMDTKFEADNRLDGKKPKKTLWKCKKCNYKDTSREALLEHVKEHSKPEEPEDKNKKLENVVDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKAKPDPNAAPSEPNVESCIKCPFKSSDKNLILMHQRQHQPSPHSMFKCSLCPFFVKDEVELAQHLTLHGVTESDDFNASKEFNMYKAAESPAPEPVTPVTVTPGTKRHKCNECPYETNSKSQYMYHEQFHRISADTPYKCPECNYSVSKRHLLHQHMRVHGIVCKKFDTEAEVSLPYPLAYRPEIEDNDESYSNLDDIPYVWVSAKNEFHKMFKCRYCSYVNSQKSKIPNHEDIHCIKPANNDVTFYKCLECKYTCDGKSKLTEHSKTHGEIYGRIYCPVDLDVPDEEQIAKLREVIEKGGETAEVDDSQKDSYHNYRVLFFCQRCPARFFDKLELQRHDKLHNFNLNYAYKCKSCEFSVPKESALTYHNLVHTDEYNTKSKMLKSTHRIHPMHPDPQLQLVHCPLTSGIIWVTANPDKKNETHAKKSEPKNPPKQYNCKECPAKFFKNSALTYHMGLHGGDGEFKCKSCSYAVKNIGNLAKHELLHDIANKPQQNADGYDSSDDVDYKIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKIINGYSEAEAENQDAKQEDDSDNIKLAIKTMPKRPPKTDFQQFSISDQQTLRLLQRRRSIENSMKENTDTSPAKERKLHMCLLCPYTNQRQDALCNHSRRHDENDISRAVGNQKCCYCNLVVVQSHFLREHLKTHFMYQKHLNPECYIANQNVSFTIKKIAGEDEEPSDDITDLKLDVKDVEEVTNNDKIFVKLATGELWEPEAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -