Basic Information

Insect: Cyclargus thomasi
Gene Symbol: -
Assembly: GCA_026546445.1
Location: JAOTAV010020880.1:795-11490[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00014 0.01 16.6 2.3 1 23 8 30 8 30 0.97

2 15 0.016 1.2 10.1 2.6 1 23 36 59 36 59 0.96

3 15 0.0057 0.41 11.5 1.4 1 20 65 84 65 87 0.94

4 15 0.0034 0.25 12.2 4.8 1 23 93 115 93 115 0.97

5 15 0.0053 0.38 11.6 6.4 1 23 121 143 121 143 0.98

6 15 0.073 5.3 8.0 2.0 1 23 150 173 150 173 0.93

7 15 2.8e-06 0.0002 21.9 0.7 2 23 182 204 181 204 0.95

8 15 8.7e-05 0.0062 17.2 0.8 2 23 211 232 210 232 0.98

9 15 0.0013 0.091 13.6 0.3 1 23 238 262 238 262 0.93

10 15 0.00025 0.018 15.8 0.2 1 23 268 290 268 290 0.98

11 15 8.6e-05 0.0062 17.3 0.6 2 23 298 320 298 320 0.96

12 15 0.02 1.4 9.8 1.2 1 23 326 349 326 349 0.95

13 15 0.00012 0.0085 16.8 0.6 2 20 354 372 353 374 0.95

14 15 2.2 1.6e+02 3.4 5.7 1 23 798 820 798 820 0.90

15 15 0.0034 0.24 12.2 3.5 1 23 971 993 971 993 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00014	0.01	16.6	2.3	1	23	8	30	8	30	0.97
2	15	0.016	1.2	10.1	2.6	1	23	36	59	36	59	0.96
3	15	0.0057	0.41	11.5	1.4	1	20	65	84	65	87	0.94
4	15	0.0034	0.25	12.2	4.8	1	23	93	115	93	115	0.97
5	15	0.0053	0.38	11.6	6.4	1	23	121	143	121	143	0.98
6	15	0.073	5.3	8.0	2.0	1	23	150	173	150	173	0.93
7	15	2.8e-06	0.0002	21.9	0.7	2	23	182	204	181	204	0.95
8	15	8.7e-05	0.0062	17.2	0.8	2	23	211	232	210	232	0.98
9	15	0.0013	0.091	13.6	0.3	1	23	238	262	238	262	0.93
10	15	0.00025	0.018	15.8	0.2	1	23	268	290	268	290	0.98
11	15	8.6e-05	0.0062	17.3	0.6	2	23	298	320	298	320	0.96
12	15	0.02	1.4	9.8	1.2	1	23	326	349	326	349	0.95
13	15	0.00012	0.0085	16.8	0.6	2	20	354	372	353	374	0.95
14	15	2.2	1.6e+02	3.4	5.7	1	23	798	820	798	820	0.90
15	15	0.0034	0.24	12.2	3.5	1	23	971	993	971	993	0.98

Sequence Information

Coding Sequence: ATGATGAGTAGCTCGTCACCACACAAGTGTAAAATATGTAAAAAGACTTTTACAGAGTTGCCTGGCCTGCGCCAACATTTACAGTTACACTCATCGGACAACCCATATGCATGTCACTTGTGTTCGTACACGGGAAAGACTGTGAAGTATTTGAACCGACACATAAAGCTCAAACACGTAGCAGCTGATGCATATGAGTGTAGTTACTGTGAAAGAAAATTTCATTATATATCACAATTAAATGAGCATCTCCCAATTCATACAAATTCCAGGCCCCACAAGTGTGATGTTTGTGGAAAAGGCTTCAACTCCTATTTTTGTTTGTCATCCCATAAAAATATACATAAAGATGAAAGACCATACAAATGTCAGTTCTGTGAGTATGCGTGTAATGACAAGTCCACATTAAGAAAACATCATGCGAGACATATGGGCAAAACAAAATTGTACCAATGCGAGACATGTTTAAGAAATTTTGAAAAGAAATGCTATCTGGAACTCCATGTATCGGAGGTGCATTTGAAACTGGATGTAAAGACCAAACCGTGCGAGACTTGTGGCAAGATGTTTAAATCCACATCAAACTTAACCTCACACATTAAACTAGTCCACAAGAAGTTATATGAGACAAAATGTGATATATGCGGCCTGTACATCAGCAACCGATACAATCTGAAGCAACATCTCCGCTCTCACATCACGCTCAGACCCTTTATGTGCGGGTTCGAGGGCTGCGACAAACGGTATAAAGACAAGGAAGCCCTATCGAGGCACAGTATCATCCACTACCCGGACCGCCAGTACCCGTGCGGCGTGTGTGGGCGGCGGTTCACACGGCCAGAGCGACGCCGCGCCCACGAGATGACGCACCGCCCGCGCGCCCGCGCCGCCACCTGCGACTACTGCGGCGCCAGTTTCTACAGCAAGAACTACCTCAGCAAGCACATAGTGACGAAACATCTCGTACGGGCGCGCTTCTACTGCAACGAGTGCGGGTTCTGTGCTCACAACAAACCCGGACTCATCACGCATATTAAAGCTGGACACGACACGGATCTGACGTGCAAGATTTGTGATAAAGTATACAAAAATAAAACTTACCTCAAATCACACTACTGGAACACGCACTTCATCAAATACAAGACGAGAACGAGAGCGGTTAAAACGAAAAAGCCAAAAAAGCCGGAGAAGGAAATAAAAATAAAAGAAGAACCAATAGACCATGATACACCCCTGGAGAAGTTAGAAAATTATAGAAATGAAATAACGCGCGAAACGGACGCAGAAGCGGCCAAGATGAAGGAGCTGATGATGAACGCTGTGATCGCCGAGTCTGATAACCTTGAGACGCTGTTCAGAGACCTGCTGAAACCTGATGATGATGATGATGATGACGATGATGATGGGATTAAAAGGAAACCCCTGGAAAGAGTCACAGAAGATACTATTACATTGGATAGATCTACCAGAACGTCAGAAATTATGTCACAAGAGTCTTATGAACATAATAAAGGTAATCCAATATTGCCTTATTCGATAAATGCCTCCTCAAGTAATGAAAATAATTCTAACACAACACTGGATATGTCTATCAGAACATTACCACCTAAGCCGCAAAAGACGAAATATAAAGAAAAAGGAAATCAAATAACAAATGCAACTTCAAAAGTAAAAGATAACCATAAGCCTACTACATATGAGAAGGTAAATAATGATACAGGCCTAACAGAGTTCGAAACTGCCGTTAGTGAAATGATCCAAGCGGGTGAGAAAGATTCACAAAATCAAATAGATAATGGTAAAGTATATGTCAAAAAAAAGGCTAAAACTGTTAAAAAAGGTACAAAAAGAAATAAAAGTAAATCTAATAAGAAAAAGCGTAAATCAAAGACTAACAAAGTTACTAAAAATGTAAAGAAAGCCGGTGATGATGAGTCAGAGAAAATAAATCGTAATAGCATAAAACTACCAGTTGCAGAAACATCAGTTACTAACGGTGCTGATAGTAATGTTACTGATAGTAATGCTACTGATAGTAAAGATACTGACAAAAATGTTATTGATAGTAACGTTACTGATAGCAATGCTACTGATAGTAATATTACTGATAGAAATGTTATTGTTGATAACGTTATTGATAGTAATACTACTGATAGAAATGTTTTTGATAGTAACGTTACTGATAGTTATGCCACTGATAGTAATATTACTGATAGAGTAAGAACTAAGAGAGCAGTCTCGAATGTTACTAAAAGTTACGCAGATATAGAAAATTCTGATGATGATGAAACTACCGAAAATGTTGAAGATATTGTAGAAAAAGAAGAGTCTATAAATCAAAATACTGAAGCAGACCATTCTACAGAATCGCTACCGCCCATATTAAAATCTCATCAGTGCTACGAATGTTTTAAGCTTTTTGACACCAAAGATAAACTACTCGAACATTGCAAAGAACATTATAACTTGTGCAACGATGTAGTGCTAAAGAAATGTCCGTTATGTGATTTTGTGACCAACGGATCTCTCCCTAGACACTTAAAAATAATGCATAATATGGACCTTAAAAATACGTATCGGCCGAGCTTAAAAGAAAACGAAACGTGCTCTCGATATTTCTATAACGTGAACAGTGAAGTTATTGATAAAATAGACATCATTCCAAGCGTAAAAAATTTAAACAAAATGGCGTACATGAAACTAGACAGACAAAGGAGAGAAGAAAATAACAAAGCTGTCAAGAAGACCAAATTGGTTAAAAAGCAAGGGGAGTGGGTTGTAGAAAAATTCAACATCGATATAAAGGCAGATAACATAGTGATACCAGATTTGAAAACGATCGAGGGTGATTACTTTGAGGGGCTCAAAAAGATGGCAACACTTGCTAAAAAAGACGGCAAAAAGTTTATGTATCCTTGCAAAGGATGCGAGAAGATTTGTCAAACGCTGTCCGCTTTGAAGCTACACTACCGACACCACGATCCAGATAAAAAACCTTACAAACCTAAAGTGTGGAAACACAAAGGCCAGACGAAACCACCAACAAAAGAACCCGAAAAGAATATTGACACCAAAAGATATGAAAAACCTAAGCCGATTGTGAACAAACATAAATGCGACCCCAAACTGATGGAGTTCTATAAAAACAACATACGTGGGGGTGACATAGAGTTCTGGCAGTTTTTGAAAATTTACAATCGAATGGCCAAAGACAATGTCAATGATTTCAAAGATTTGGAGAATTCTACGAAATTTGGCATTCATATTGCTGATAAAACAAACGAAACTGTTAGTAATAATTCTAGCTCCGATAAGGAACCTTTCAAAAGTTCTAGTCAAGAAGCTGTAAAATTGGCCACCACAGTCGAAGTTTCTAGAATAACAAATGCGAAATCAAAATTCAAGAGAGTTGTAATGATTAATAGAAAAGAACATCTCAGACGAATTAAACTAAAGCAGCTGTTACGGGAGAAAATGAAACAGAATGCTAATACCAAGTCATGA
Protein Sequence: MMSSSSPHKCKICKKTFTELPGLRQHLQLHSSDNPYACHLCSYTGKTVKYLNRHIKLKHVAADAYECSYCERKFHYISQLNEHLPIHTNSRPHKCDVCGKGFNSYFCLSSHKNIHKDERPYKCQFCEYACNDKSTLRKHHARHMGKTKLYQCETCLRNFEKKCYLELHVSEVHLKLDVKTKPCETCGKMFKSTSNLTSHIKLVHKKLYETKCDICGLYISNRYNLKQHLRSHITLRPFMCGFEGCDKRYKDKEALSRHSIIHYPDRQYPCGVCGRRFTRPERRRAHEMTHRPRARAATCDYCGASFYSKNYLSKHIVTKHLVRARFYCNECGFCAHNKPGLITHIKAGHDTDLTCKICDKVYKNKTYLKSHYWNTHFIKYKTRTRAVKTKKPKKPEKEIKIKEEPIDHDTPLEKLENYRNEITRETDAEAAKMKELMMNAVIAESDNLETLFRDLLKPDDDDDDDDDDGIKRKPLERVTEDTITLDRSTRTSEIMSQESYEHNKGNPILPYSINASSSNENNSNTTLDMSIRTLPPKPQKTKYKEKGNQITNATSKVKDNHKPTTYEKVNNDTGLTEFETAVSEMIQAGEKDSQNQIDNGKVYVKKKAKTVKKGTKRNKSKSNKKKRKSKTNKVTKNVKKAGDDESEKINRNSIKLPVAETSVTNGADSNVTDSNATDSKDTDKNVIDSNVTDSNATDSNITDRNVIVDNVIDSNTTDRNVFDSNVTDSYATDSNITDRVRTKRAVSNVTKSYADIENSDDDETTENVEDIVEKEESINQNTEADHSTESLPPILKSHQCYECFKLFDTKDKLLEHCKEHYNLCNDVVLKKCPLCDFVTNGSLPRHLKIMHNMDLKNTYRPSLKENETCSRYFYNVNSEVIDKIDIIPSVKNLNKMAYMKLDRQRREENNKAVKKTKLVKKQGEWVVEKFNIDIKADNIVIPDLKTIEGDYFEGLKKMATLAKKDGKKFMYPCKGCEKICQTLSALKLHYRHHDPDKKPYKPKVWKHKGQTKPPTKEPEKNIDTKRYEKPKPIVNKHKCDPKLMEFYKNNIRGGDIEFWQFLKIYNRMAKDNVNDFKDLENSTKFGIHIADKTNETVSNNSSSDKEPFKSSSQEAVKLATTVEVSRITNAKSKFKRVVMINRKEHLRRIKLKQLLREKMKQNANTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -