Ctho016602.1
Basic Information
- Insect
- Cyclargus thomasi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_026546445.1
- Location
- JAOTAV010000017.1:134599-161236[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-15 6.2e-12 45.4 0.0 1 38 238 276 238 280 0.95 2 2 5.9e-19 1e-15 57.5 0.0 1 43 442 485 442 487 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAACGAAATGGAAGTTATACCAGGACGGGCTGATGCCGAGGGCAGAGGATTCCAGCGACGAGGATCCTGGGCTACCCCCGCCAGGGCTCAAAATAAAGACCATAGAGCAGATAAACGCGCCAGACAGCGAGAAGGGAGCGGACAAGGAGGAGAAGAGAGAGACGATCCTGGAGAGCCTCATCAAGAGGCCGGCCACGCAGCCCAAGGTGGAGGAGGAGCCGGCGGACTGGAAGCCGGCGGACAGGTGTTACTTCTGCGTGGACGGTGCTGAGGAGCAGACAGCTGGGGCTACGAGTCCGGCTTCAGAATCGGACAGCAGTTCAGTGTCGGGCGCCAAAAGTCCGGCTGGCCATCCGCTTCTACAGCATCTACTGCAGCTGCAGCTCCAGGGGCAAAATCCGCAGGCGATCGCACAGTTCCAACAGATGCTGGCTGCGCTCGCGGCTTTAGGGTCGGGGCTGGTGCCGCCGGCGCTGTCACAGGCCTGGATGATGCAGCGACTGGCCGCCAGGCCGCAGGTAGACAGCCGAGTACCAGAAGGCGGTGAGAAGGTTTCGGCCCCCAGCTCGTCGCCCACCGCTGAACAGCCGCTGGACCTCAGCGCCAAGTCCACCTCCTCCACCAGCGGCACACCGCCTCCTGATGGGAAGGATACCTCCAGATTAAAACGTGCGATGGTAGAAGGTAGTAGCCGGCGCGCGTACACCGAGGATGAGTTGAACCAGGCGTTACGGGACATCCAGTCCGGCCGGCTCGGCACCCGGCGCGCCGCCGTCGTGTACGGCATACCGCGCTCTACGCTCCGCAACAAGGTCAATAAGTTCGGGCTCGCCGACGCCGCACCCGACTCCGACCCCGACAGCGACCCCGACAAGCCTGACTCCCCCCAGTCCGTCATCCTGAAGATACCCACCTTCCCCCCGCCAGACGACAAGAGCCCGTCGCCCGTCGTCCCCGGCGCCGCGCCCGTCACCCCGCTCACGCCGCTCATCCGGCCGCCGCCACTCAGCGCGCCCTCGCCGCTGCTGCTGCCCTCCTCGGTCTTTGCCGACCCACCCACCAACCAGCACCTCTTCACGTCCCTCAGTGACGTCATCGCCAAAAGCATCAGCCAGAAGTTCCAGCAGCCGCTCGACCGGCCGCAGCCCGACCTGCAGTTCGTCCGCGCGCCGGACCGACACGTGTCCGTCATCAAGACGCCGCCGGACAACCAGCGCTATCCCGCGCCGAGCAACTCCAAGGGTCCTACGAACAACGGCCAGCCCGCGACGGGCGGCAAGGGCACGCGGCCGAAGCGCGGCAAGTACCGGAACTACGACCGTGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAGCGTGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGTGTGCCGCACTCCACGCTTGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGAGGAAGCGCGAGCCGAAGCCGCAGCCGGACGTTAAGCCGCAGCCGCCGAAGCCGCCCCCGAAGCCGCCGACGAAGTTCGCGAACGGCCTCAATGGGCCCGAGTACCCCGCGAGCTACCCGTTCTGGACGGGGACGGGGTTCGCGCCGCCGCCCGCGCCCGACCTCTACGCCTCGCACATGATGCGTCGCCTGCGCGAGGAGGCGCCGCCGCCCGCCAACGGATCCTTCCTGGAGGGCATCATCCGGTCGAGCCTGGAGCGGGGCGGGGGCGGGTGCGGCGGTGCGGGGGGTGCGACGGGAGGCGGGGGGGCGGTGCGGCGGCGCGCGGACGGCGGCGTGGAGCTGCCCGCACGCCGCCCGCGCCTCGAGGACCACGCGCTCGCCGCCGACCTGCGCGAGACCGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACCCCACCGCCCGAGCCCGACGCCTAG
- Protein Sequence
- MGRTKWKLYQDGLMPRAEDSSDEDPGLPPPGLKIKTIEQINAPDSEKGADKEEKRETILESLIKRPATQPKVEEEPADWKPADRCYFCVDGAEEQTAGATSPASESDSSSVSGAKSPAGHPLLQHLLQLQLQGQNPQAIAQFQQMLAALAALGSGLVPPALSQAWMMQRLAARPQVDSRVPEGGEKVSAPSSSPTAEQPLDLSAKSTSSTSGTPPPDGKDTSRLKRAMVEGSSRRAYTEDELNQALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLADAAPDSDPDSDPDKPDSPQSVILKIPTFPPPDDKSPSPVVPGAAPVTPLTPLIRPPPLSAPSPLLLPSSVFADPPTNQHLFTSLSDVIAKSISQKFQQPLDRPQPDLQFVRAPDRHVSVIKTPPDNQRYPAPSNSKGPTNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPKPPTKFANGLNGPEYPASYPFWTGTGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERGGGGCGGAGGATGGGGAVRRRADGGVELPARRPRLEDHALAADLRETVQRLRADKLRPRNGTPTPPPEPDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00403689; iTF_01217413; iTF_01248009; iTF_00164246; iTF_00934656; iTF_00288776;
- 90% Identity
- iTF_00288776; iTF_01248009; iTF_01217413; iTF_00403689; iTF_00164246; iTF_00934656;
- 80% Identity
- -